Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01282

Experiment: PYE with Benzalkonium Chloride 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Benzalkonium Chloride 0.0001 mg/ml
1,407,646	+		CCNA_01281	0.39	+1.3
1,407,654	-		CCNA_01281	0.40	+0.5
1,407,678	+		CCNA_01281	0.41	+1.5
1,407,685	-		CCNA_01281	0.42	+0.9
1,407,686	-		CCNA_01281	0.42	+2.5
1,407,709	+		CCNA_01281	0.43	+0.5
1,407,709	+		CCNA_01281	0.43	+0.7
1,407,709	+		CCNA_01281	0.43	+1.2
1,407,709	+		CCNA_01281	0.43	-1.9
1,407,717	-		CCNA_01281	0.44	+0.9
1,407,717	-		CCNA_01281	0.44	+1.9
1,407,717	-		CCNA_01281	0.44	+0.9
1,407,717	-		CCNA_01281	0.44	+0.9
1,407,717	-		CCNA_01281	0.44	+0.5
1,407,810	-		CCNA_01281	0.50	-1.0
1,407,810	-		CCNA_01281	0.50	-0.8
1,407,811	+		CCNA_01281	0.50	-0.1
1,407,829	-		CCNA_01281	0.51	+0.5
1,407,837	+		CCNA_01281	0.52	-2.8
1,407,837	+		CCNA_01281	0.52	+1.5
1,407,837	+		CCNA_01281	0.52	+0.5
1,407,845	-		CCNA_01281	0.52	+0.2
1,407,845	-		CCNA_01281	0.52	+0.9
1,407,847	+		CCNA_01281	0.53	+1.5
1,407,863	+		CCNA_01281	0.54	+1.7
1,407,873	+		CCNA_01281	0.54	+0.7
1,407,936	+		CCNA_01281	0.58	-0.3
1,407,983	-		CCNA_01281	0.62	-0.2
1,408,013	-		CCNA_01281	0.64	-0.5
1,408,053	+		CCNA_01281	0.66	+0.1
1,408,053	+		CCNA_01281	0.66	-0.5
1,408,061	-		CCNA_01281	0.67	+1.2
1,408,148	-		CCNA_01281	0.73	+0.9
1,408,166	+		CCNA_01281	0.74	+0.9
1,408,166	+		CCNA_01281	0.74	+0.5
1,408,174	-		CCNA_01281	0.74	+1.5
1,408,174	-		CCNA_01281	0.74	+0.2
1,408,174	-		CCNA_01281	0.74	-0.3
1,408,176	+		CCNA_01281	0.75	+1.5
1,408,213	-		CCNA_01281	0.77	+0.5
1,408,220	+		CCNA_01281	0.78	+0.7
1,408,221	-		CCNA_01281	0.78	+1.5
1,408,228	-		CCNA_01281	0.78	+1.5
1,408,230	+		CCNA_01281	0.78	+0.5
1,408,230	+				+0.9
1,408,310	-		CCNA_01281	0.84	-0.3
1,408,316	+		CCNA_01281	0.84	-0.5
1,408,374	+		CCNA_01281	0.88	+1.5
1,408,384	+		CCNA_01281	0.89	-1.3
1,408,384	+		CCNA_01281	0.89	+2.5
1,408,392	-		CCNA_01281	0.89	-1.4
1,408,420	+				-0.1
1,408,428	-				-0.7
1,408,428	-				+0.2
1,408,452	+				-0.4
1,408,482	+				-1.1
1,408,519	+				+0.2
1,408,523	+				-1.3
1,408,537	-				-1.6
1,408,554	+				+0.2
1,408,555	-				+0.9
1,408,640	+				+0.8
1,408,648	-				-0.1
1,408,699	-				+0.9
1,408,701	-				-0.3
1,408,704	-				-1.2
1,408,817	+		CCNA_01282	0.18	-0.5
1,408,852	-		CCNA_01282	0.22	-0.8
1,408,860	-		CCNA_01282	0.23	+0.2
1,408,882	-		CCNA_01282	0.25	-0.5
1,408,940	-		CCNA_01282	0.30	-0.7
1,408,946	+		CCNA_01282	0.31	+1.5
1,408,963	+		CCNA_01282	0.32	-0.8
1,409,003	+		CCNA_01282	0.36	-1.3
1,409,082	-		CCNA_01282	0.44	+1.5
1,409,089	-		CCNA_01282	0.44	-0.8
1,409,096	+		CCNA_01282	0.45	-1.1
1,409,096	+		CCNA_01282	0.45	+0.5
1,409,106	+		CCNA_01282	0.46	-0.7
1,409,119	+		CCNA_01282	0.47	-0.1
1,409,138	+		CCNA_01282	0.49	-0.1
1,409,163	-		CCNA_01282	0.52	-1.1
1,409,171	+		CCNA_01282	0.52	+0.2
1,409,203	+		CCNA_01282	0.55	+1.5
1,409,210	+		CCNA_01282	0.56	+0.5
1,409,281	-		CCNA_01282	0.63	+0.5
1,409,291	-		CCNA_01282	0.64	-2.4
1,409,321	-		CCNA_01282	0.67	+0.3
1,409,364	+		CCNA_01282	0.71	-1.4
1,409,364	+		CCNA_01282	0.71	-0.7
1,409,371	-				+1.5
1,409,372	-		CCNA_01282	0.72	-1.0
1,409,372	-		CCNA_01282	0.72	-2.0
1,409,418	+		CCNA_01282	0.76	+2.5
1,409,426	-		CCNA_01282	0.77	+0.2
1,409,436	-		CCNA_01282	0.78	+1.5
1,409,480	+		CCNA_01282	0.82	+0.0
1,409,613	+				+0.9
1,409,613	+				+0.9
1,409,613	+				-2.2
1,409,715	-		CCNA_01283	0.12	-0.1
1,409,736	-		CCNA_01283	0.13	-1.4
1,409,744	-		CCNA_01283	0.14	-0.5
1,409,762	+		CCNA_01283	0.16	+0.5
1,409,775	-		CCNA_01283	0.17	+0.5
1,409,796	-		CCNA_01283	0.18	+0.5
1,409,865	-		CCNA_01283	0.24	-1.5
1,409,909	+		CCNA_01283	0.28	-1.1
1,409,921	-		CCNA_01283	0.29	+1.5
1,409,986	-		CCNA_01283	0.34	+0.9
1,409,987	-		CCNA_01283	0.34	-1.9
1,410,012	+		CCNA_01283	0.37	-1.1
1,410,036	+		CCNA_01283	0.39	-1.8
1,410,119	-		CCNA_01283	0.45	+1.1
1,410,177	+		CCNA_01283	0.50	-1.5
1,410,185	-		CCNA_01283	0.51	+2.5
1,410,265	+				+1.5
1,410,273	-		CCNA_01283	0.58	+1.5
1,410,273	-		CCNA_01283	0.58	+1.5
1,410,273	-		CCNA_01283	0.58	+0.5
1,410,273	-		CCNA_01283	0.58	+2.5
1,410,296	+		CCNA_01283	0.60	-1.6
1,410,363	+		CCNA_01283	0.66	+1.5
1,410,370	+		CCNA_01283	0.66	+2.5
1,410,387	-		CCNA_01283	0.68	-1.1
1,410,397	-		CCNA_01283	0.69	+0.5
1,410,420	-		CCNA_01283	0.71	+1.5
1,410,519	+		CCNA_01283	0.79	+1.5
1,410,520	-		CCNA_01283	0.79	-0.4
1,410,527	-		CCNA_01283	0.80	-0.9
1,410,561	+		CCNA_01283	0.82	-1.6
1,410,561	+		CCNA_01283	0.82	-0.3
1,410,563	-		CCNA_01283	0.83	-0.9
1,410,569	+		CCNA_01283	0.83	-2.1
1,410,627	+		CCNA_01283	0.88	+0.1
1,410,635	-		CCNA_01283	0.89	-0.9
1,410,651	+		CCNA_01283	0.90	-0.9