Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01148

Experiment: PYE with Benzalkonium Chloride 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Benzalkonium Chloride 0.0001 mg/ml
1,250,205	-				-0.4
1,250,227	-				-1.7
1,250,273	+				-0.4
1,250,273	+				-0.7
1,250,273	+				+2.5
1,250,281	-				+0.1
1,250,282	+				-1.4
1,250,339	+				-0.7
1,250,339	+				-0.1
1,250,347	-				-2.9
1,250,347	-				-1.2
1,250,371	-				+0.5
1,250,374	+				-1.6
1,250,471	-				-0.6
1,250,539	-				+0.9
1,250,546	+				+0.9
1,250,553	+				-0.0
1,250,554	+				+1.5
1,250,578	-				-2.2
1,250,584	-				-0.7
1,250,599	+				-0.4
1,250,609	+		CCNA_01147	0.10	-0.7
1,250,679	+		CCNA_01147	0.23	-0.5
1,250,704	+		CCNA_01147	0.27	-1.0
1,250,754	-		CCNA_01147	0.36	+2.5
1,250,756	+		CCNA_01147	0.37	-1.2
1,250,792	+		CCNA_01147	0.43	-0.5
1,250,792	+		CCNA_01147	0.43	-0.9
1,250,802	+		CCNA_01147	0.45	-2.1
1,250,847	+		CCNA_01147	0.53	+0.6
1,250,847	-		CCNA_01147	0.53	-0.9
1,250,853	+		CCNA_01147	0.54	+2.5
1,250,855	-		CCNA_01147	0.55	+0.5
1,250,878	+		CCNA_01147	0.59	+0.6
1,250,896	-		CCNA_01147	0.62	-0.4
1,250,908	+		CCNA_01147	0.64	-0.6
1,250,916	-		CCNA_01147	0.66	+0.1
1,250,916	-		CCNA_01147	0.66	+1.5
1,250,918	+		CCNA_01147	0.66	-1.3
1,250,969	-		CCNA_01147	0.76	-0.5
1,251,033	-		CCNA_01147	0.87	+2.5
1,251,039	+		CCNA_01147	0.88	-0.4
1,251,039	+		CCNA_01147	0.88	+0.5
1,251,039	+		CCNA_01147	0.88	+0.5
1,251,045	-		CCNA_01147	0.89	-1.9
1,251,047	-		CCNA_01147	0.90	-1.5
1,251,060	+				-0.1
1,251,128	-				+0.1
1,251,204	+				-1.0
1,251,204	+				+0.1
1,251,204	+				+3.5
1,251,209	-				-0.7
1,251,211	+		CCNA_01148	0.11	-2.3
1,251,212	-		CCNA_01148	0.11	+1.5
1,251,212	-		CCNA_01148	0.11	-1.4
1,251,220	+		CCNA_01148	0.16	-0.9
1,251,221	+		CCNA_01148	0.16	-1.6
1,251,221	+		CCNA_01148	0.16	-1.6
1,251,221	+		CCNA_01148	0.16	-0.1
1,251,221	+		CCNA_01148	0.16	-0.5
1,251,228	-		CCNA_01148	0.20	-1.4
1,251,228	-		CCNA_01148	0.20	-0.1
1,251,228	-		CCNA_01148	0.20	+1.5
1,251,229	-		CCNA_01148	0.21	+2.5
1,251,229	-		CCNA_01148	0.21	-1.0
1,251,231	+		CCNA_01148	0.22	-1.2
1,251,231	+		CCNA_01148	0.22	+1.9
1,251,231	+		CCNA_01148	0.22	-0.1
1,251,238	+		CCNA_01148	0.26	-0.4
1,251,239	-		CCNA_01148	0.27	-0.5
1,251,269	-		CCNA_01148	0.44	+1.5
1,251,269	-		CCNA_01148	0.44	-0.4
1,251,269	-		CCNA_01148	0.44	+0.5
1,251,281	-		CCNA_01148	0.50	-2.0
1,251,331	-		CCNA_01148	0.79	-0.1
1,251,348	+		CCNA_01148	0.88	+0.1
1,251,365	-				+0.1
1,251,369	+				+1.3
1,251,377	-				+1.0
1,251,377	-				-1.2
1,251,485	-				-0.5
1,251,486	-				+0.5
1,251,581	+				+0.9
1,251,589	-				+0.5
1,251,627	+				-1.6
1,251,651	+		CCNA_01149	0.11	+0.5
1,251,651	+		CCNA_01149	0.11	+2.5
1,251,651	+		CCNA_01149	0.11	-0.5
1,251,651	+		CCNA_01149	0.11	-0.4
1,251,651	+		CCNA_01149	0.11	-0.5
1,251,659	-		CCNA_01149	0.11	+0.5
1,251,659	-		CCNA_01149	0.11	-1.4
1,251,659	-		CCNA_01149	0.11	+0.9
1,251,659	-		CCNA_01149	0.11	-1.3
1,251,725	-		CCNA_01149	0.13	-0.4
1,251,728	+		CCNA_01149	0.14	+2.5
1,251,796	+		CCNA_01149	0.16	-0.0
1,251,802	+		CCNA_01149	0.16	-0.4
1,251,816	+		CCNA_01149	0.17	-1.0
1,251,850	+		CCNA_01149	0.18	-0.4
1,251,899	-		CCNA_01149	0.20	+0.1
1,251,899	-		CCNA_01149	0.20	+1.5
1,251,933	-		CCNA_01149	0.21	+2.5
1,251,935	+		CCNA_01149	0.21	-1.0
1,251,935	+		CCNA_01149	0.21	+2.5
1,251,940	+		CCNA_01149	0.22	-0.7
1,251,943	-		CCNA_01149	0.22	+1.5
1,251,943	-		CCNA_01149	0.22	-0.1
1,251,943	-		CCNA_01149	0.22	-0.1
1,251,945	+		CCNA_01149	0.22	-1.1
1,251,945	+		CCNA_01149	0.22	-0.7
1,251,968	+		CCNA_01149	0.23	-0.7
1,251,973	+		CCNA_01149	0.23	-1.1
1,251,981	+		CCNA_01149	0.23	+1.5
1,251,981	+		CCNA_01149	0.23	+1.5
1,251,981	+		CCNA_01149	0.23	-0.6
1,251,986	+		CCNA_01149	0.23	-0.0
1,251,989	-		CCNA_01149	0.23	-0.1
1,251,989	-		CCNA_01149	0.23	-1.4
1,252,069	+		CCNA_01149	0.26	-0.5
1,252,131	+		CCNA_01149	0.29	-1.0
1,252,131	+		CCNA_01149	0.29	+0.9
1,252,141	+		CCNA_01149	0.29	-1.2
1,252,141	+		CCNA_01149	0.29	-0.4
1,252,171	-		CCNA_01149	0.30	-1.5
1,252,184	-		CCNA_01149	0.31	+0.0
1,252,195	+		CCNA_01149	0.31	-1.5
1,252,204	-		CCNA_01149	0.32	-0.1
1,252,230	-		CCNA_01149	0.33	+0.9
1,252,264	+		CCNA_01149	0.34	+1.5
1,252,281	-		CCNA_01149	0.35	+0.1
1,252,306	+		CCNA_01149	0.35	-0.1