Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01143

Experiment: PYE with Benzalkonium Chloride 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Benzalkonium Chloride 0.0001 mg/ml
1,246,758	-				+1.5
1,246,835	-				+1.0
1,246,971	+		CCNA_01142	0.11	-0.7
1,247,049	+		CCNA_01142	0.27	-0.5
1,247,081	+		CCNA_01142	0.34	-0.2
1,247,089	-		CCNA_01142	0.35	-0.7
1,247,106	+		CCNA_01142	0.39	+1.3
1,247,131	+		CCNA_01142	0.44	+0.2
1,247,137	-		CCNA_01142	0.45	-0.5
1,247,145	+		CCNA_01142	0.47	-1.3
1,247,158	-		CCNA_01142	0.50	+1.5
1,247,158	-		CCNA_01142	0.50	+2.5
1,247,214	-		CCNA_01142	0.62	+1.5
1,247,224	-		CCNA_01142	0.64	+1.5
1,247,228	+		CCNA_01142	0.65	+0.5
1,247,251	+		CCNA_01142	0.69	-0.5
1,247,273	+		CCNA_01142	0.74	+0.0
1,247,281	-		CCNA_01142	0.76	-1.9
1,247,293	+		CCNA_01142	0.78	-0.3
1,247,304	-		CCNA_01142	0.81	+2.5
1,247,335	+		CCNA_01142	0.87	-0.1
1,247,411	+				+0.2
1,247,411	+				-0.6
1,247,418	-				-0.1
1,247,419	-				+1.5
1,247,438	-				-1.7
1,247,440	-				-0.1
1,247,461	-				-0.7
1,247,468	+				+1.1
1,247,476	-				-1.3
1,247,534	-				-1.9
1,247,551	-				+0.1
1,247,563	-				-2.1
1,247,577	+				+0.6
1,247,628	-				+0.5
1,247,667	+				+0.5
1,247,670	+				+1.5
1,247,675	-				+2.5
1,247,780	+				+1.9
1,247,785	+				-1.4
1,247,793	-				-1.3
1,247,793	-				-1.0
1,247,850	-		CCNA_01143	0.19	-0.6
1,247,850	-		CCNA_01143	0.19	-0.9
1,247,853	-		CCNA_01143	0.20	-1.3
1,247,985	+		CCNA_01143	0.47	-1.0
1,247,993	-		CCNA_01143	0.49	+1.0
1,247,993	-		CCNA_01143	0.49	-0.4
1,247,995	+		CCNA_01143	0.49	-2.1
1,247,995	+		CCNA_01143	0.49	+1.7
1,248,028	+		CCNA_01143	0.56	-1.3
1,248,029	-		CCNA_01143	0.56	-0.7
1,248,036	-		CCNA_01143	0.58	-1.6
1,248,087	-		CCNA_01143	0.68	-1.1
1,248,091	-		CCNA_01143	0.69	-1.0
1,248,107	+		CCNA_01143	0.72	-0.5
1,248,138	+		CCNA_01143	0.79	-0.5
1,248,142	-		CCNA_01143	0.80	-0.5
1,248,179	+		CCNA_01143	0.87	+1.0
1,248,195	+				+0.5
1,248,247	+				+2.0
1,248,255	-				-0.5
1,248,255	-				-2.1
1,248,261	-				-0.2
1,248,275	-				-1.1
1,248,275	-				-0.8
1,248,292	+				-1.6
1,248,292	+				-1.1
1,248,292	+				-1.1
1,248,300	-				+0.7
1,248,300	-				+0.3
1,248,376	+		CCNA_01144	0.27	+0.1
1,248,385	-		CCNA_01144	0.30	-0.8
1,248,391	-		CCNA_01144	0.31	-0.2
1,248,432	+		CCNA_01144	0.41	-0.3
1,248,462	-		CCNA_01144	0.49	+0.8
1,248,464	+		CCNA_01144	0.50	+2.5
1,248,464	+		CCNA_01144	0.50	+1.5
1,248,467	-		CCNA_01144	0.50	+0.9
1,248,483	+		CCNA_01144	0.54	-1.8
1,248,491	-		CCNA_01144	0.56	+1.7
1,248,491	-		CCNA_01144	0.56	+0.1
1,248,496	-		CCNA_01144	0.58	-2.0
1,248,496	-		CCNA_01144	0.58	-0.5
1,248,496	-		CCNA_01144	0.58	+0.1
1,248,496	-		CCNA_01144	0.58	-0.9
1,248,511	-		CCNA_01144	0.62	+0.5
1,248,530	-		CCNA_01144	0.66	-1.2
1,248,544	+		CCNA_01144	0.70	-0.3
1,248,563	-		CCNA_01144	0.75	+0.6
1,248,580	-		CCNA_01144	0.79	-1.6
1,248,580	-		CCNA_01144	0.79	+1.1
1,248,616	+		CCNA_01144	0.88	+0.1
1,248,624	-				+1.7
1,248,774	-				-0.8
1,248,813	-				+0.1
1,248,815	+				-0.1
1,248,815	+				-0.5
1,248,815	+				+3.5
1,248,815	+				-0.3
1,248,815	+				+0.1
1,248,815	+				-1.9
1,248,815	+				-0.9
1,248,815	+				-1.7
1,248,820	+				-0.1
1,248,823	-				+1.5
1,248,823	-				-1.8
1,248,823	-				-0.4
1,248,823	-				-2.1
1,248,823	-				-1.5
1,248,823	-				+0.9
1,248,826	+				-0.1
1,248,827	-				-0.0
1,248,828	-				-1.2
1,248,828	-				-0.1
1,248,848	-		CCNA_01145	0.10	+0.1
1,248,854	+		CCNA_01145	0.11	+0.9
1,248,865	+		CCNA_01145	0.11	-0.1
1,248,884	+		CCNA_01145	0.12	-2.6
1,248,892	-		CCNA_01145	0.13	+0.9
1,249,001	-		CCNA_01145	0.20	+0.6
1,249,041	+		CCNA_01145	0.22	+1.5
1,249,041	+		CCNA_01145	0.22	+2.5
1,249,041	+		CCNA_01145	0.22	-0.8
1,249,049	-		CCNA_01145	0.23	+1.5
1,249,049	-		CCNA_01145	0.23	-1.5
1,249,049	-		CCNA_01145	0.23	-1.2
1,249,049	-		CCNA_01145	0.23	+0.9
1,249,049	-		CCNA_01145	0.23	-1.2
1,249,049	-		CCNA_01145	0.23	+0.1
1,249,049	-		CCNA_01145	0.23	-0.1
1,249,056	+		CCNA_01145	0.23	+1.7
1,249,079	+		CCNA_01145	0.25	+0.9
1,249,082	-		CCNA_01145	0.25	-1.9
1,249,087	-		CCNA_01145	0.25	+0.9
1,249,087	-		CCNA_01145	0.25	-0.4
1,249,087	-		CCNA_01145	0.25	+2.5
1,249,089	+		CCNA_01145	0.25	-0.0
1,249,099	+		CCNA_01145	0.26	+0.9
1,249,099	+		CCNA_01145	0.26	-1.5
1,249,099	+		CCNA_01145	0.26	-1.0
1,249,104	+		CCNA_01145	0.26	+3.0
1,249,107	-		CCNA_01145	0.26	-0.4
1,249,107	-		CCNA_01145	0.26	-1.0
1,249,107	-		CCNA_01145	0.26	+0.1
1,249,107	-		CCNA_01145	0.26	+1.5
1,249,107	-		CCNA_01145	0.26	+1.5
1,249,114	+		CCNA_01145	0.27	-1.2
1,249,122	-		CCNA_01145	0.27	+0.9
1,249,122	-		CCNA_01145	0.27	+0.9
1,249,125	+		CCNA_01145	0.27	-0.1
1,249,127	-		CCNA_01145	0.28	-1.0
1,249,135	+		CCNA_01145	0.28	-1.1
1,249,135	+		CCNA_01145	0.28	+1.5
1,249,193	-		CCNA_01145	0.32	+0.5
1,249,212	-		CCNA_01145	0.33	-0.4
1,249,212	-		CCNA_01145	0.33	+0.9
1,249,213	-		CCNA_01145	0.33	-1.1
1,249,214	+		CCNA_01145	0.33	-1.1
1,249,222	-		CCNA_01145	0.34	+2.1
1,249,222	-		CCNA_01145	0.34	+2.1
1,249,222	-		CCNA_01145	0.34	+2.4
1,249,222	-		CCNA_01145	0.34	+2.0
1,249,222	-		CCNA_01145	0.34	+3.0
1,249,222	-		CCNA_01145	0.34	+1.4
1,249,222	-		CCNA_01145	0.34	+3.3
1,249,222	-		CCNA_01145	0.34	+2.0
1,249,222	-		CCNA_01145	0.34	+2.1
1,249,224	+		CCNA_01145	0.34	-1.7
1,249,224	+		CCNA_01145	0.34	+2.5
1,249,232	-		CCNA_01145	0.34	-0.9
1,249,232	-		CCNA_01145	0.34	-1.4