Strain Fitness in Caulobacter crescentus NA1000 around CCNA_00998

Experiment: PYE with Benzalkonium Chloride 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Benzalkonium Chloride 0.0001 mg/ml
1,080,370	-		CCNA_00997	0.37	-0.2
1,080,379	+		CCNA_00997	0.38	+0.1
1,080,379	+		CCNA_00997	0.38	-0.6
1,080,431	+		CCNA_00997	0.42	+0.2
1,080,432	+		CCNA_00997	0.42	-0.2
1,080,437	-		CCNA_00997	0.43	-0.9
1,080,467	+		CCNA_00997	0.45	-0.1
1,080,479	+		CCNA_00997	0.46	+0.6
1,080,496	+		CCNA_00997	0.47	-1.8
1,080,496	+		CCNA_00997	0.47	-0.7
1,080,518	-		CCNA_00997	0.49	+0.1
1,080,543	+		CCNA_00997	0.51	+0.4
1,080,548	-		CCNA_00997	0.52	+0.1
1,080,548	-		CCNA_00997	0.52	-0.3
1,080,585	+		CCNA_00997	0.55	+1.4
1,080,585	+		CCNA_00997	0.55	+0.8
1,080,590	+		CCNA_00997	0.55	+0.3
1,080,595	+		CCNA_00997	0.56	-1.8
1,080,595	+		CCNA_00997	0.56	+0.1
1,080,603	-		CCNA_00997	0.56	-0.9
1,080,635	+		CCNA_00997	0.59	+1.4
1,080,635	+		CCNA_00997	0.59	+0.2
1,080,635	+		CCNA_00997	0.59	+0.8
1,080,643	-		CCNA_00997	0.59	+0.4
1,080,669	-		CCNA_00997	0.62	+0.8
1,080,707	-		CCNA_00997	0.65	-0.4
1,080,759	+		CCNA_00997	0.69	+0.1
1,080,765	-		CCNA_00997	0.69	+0.4
1,080,767	-		CCNA_00997	0.70	+1.4
1,080,776	-		CCNA_00997	0.70	-0.6
1,080,799	+		CCNA_00997	0.72	-0.1
1,080,799	+		CCNA_00997	0.72	+0.8
1,080,807	-		CCNA_00997	0.73	-1.5
1,080,832	-		CCNA_00997	0.75	-0.4
1,080,846	-		CCNA_00997	0.76	+0.8
1,080,846	-		CCNA_00997	0.76	-1.3
1,080,851	+		CCNA_00997	0.76	-0.4
1,080,851	+		CCNA_00997	0.76	+1.1
1,080,859	-		CCNA_00997	0.77	+0.1
1,080,872	+		CCNA_00997	0.78	+0.7
1,080,877	+		CCNA_00997	0.79	+0.0
1,080,877	+		CCNA_00997	0.79	-0.9
1,080,890	-		CCNA_00997	0.80	-0.2
1,080,907	+		CCNA_00997	0.81	-0.7
1,080,942	-		CCNA_00997	0.84	+0.8
1,080,989	+		CCNA_00997	0.88	+1.3
1,080,989	+		CCNA_00997	0.88	+1.4
1,080,999	+		CCNA_00997	0.89	-0.4
1,081,007	-		CCNA_00997	0.89	+1.4
1,081,011	-		CCNA_00997	0.90	-0.8
1,081,012	+		CCNA_00997	0.90	-1.0
1,081,039	+				-0.8
1,081,039	+				-0.8
1,081,047	-				-0.6
1,081,047	-				-0.4
1,081,047	-				-1.2
1,081,096	-				+0.2
1,081,125	+				-0.2
1,081,133	-				-0.2
1,081,228	-				-1.4
1,081,306	+				+0.8
1,081,306	+				+0.1
1,081,306	+				-0.8
1,081,306	+				-1.0
1,081,314	-				-0.2
1,081,324	-				-0.2
1,081,409	+		CCNA_00998	0.10	+1.7
1,081,417	-		CCNA_00998	0.12	-1.4
1,081,421	+		CCNA_00998	0.13	+2.2
1,081,429	-		CCNA_00998	0.15	+0.4
1,081,457	+		CCNA_00998	0.21	+3.0
1,081,470	-		CCNA_00998	0.25	+0.1
1,081,471	+		CCNA_00998	0.25	+1.6
1,081,471	+		CCNA_00998	0.25	+1.6
1,081,481	+		CCNA_00998	0.27	+1.4
1,081,481	+		CCNA_00998	0.27	+2.2
1,081,581	+		CCNA_00998	0.51	+2.7
1,081,581	+		CCNA_00998	0.51	+2.7
1,081,581	+		CCNA_00998	0.51	+2.2
1,081,614	+		CCNA_00998	0.59	+2.9
1,081,622	-		CCNA_00998	0.61	+0.8
1,081,675	+		CCNA_00998	0.73	+3.0
1,081,675	+		CCNA_00998	0.73	+2.6
1,081,675	+		CCNA_00998	0.73	+2.6
1,081,683	-		CCNA_00998	0.75	-0.8
1,081,683	-		CCNA_00998	0.75	+0.4
1,081,683	-		CCNA_00998	0.75	-1.5
1,081,683	-		CCNA_00998	0.75	-1.5
1,081,683	-		CCNA_00998	0.75	+0.8
1,081,686	+		CCNA_00998	0.76	+2.6
1,081,702	+		CCNA_00998	0.80	+3.0
1,081,990	-				+2.4
1,082,032	+				+1.7
1,082,035	-		CCNA_00999	0.10	+3.7
1,082,132	+		CCNA_00999	0.30	+2.7
1,082,140	-		CCNA_00999	0.31	-0.9
1,082,171	+		CCNA_00999	0.38	+2.7
1,082,171	+		CCNA_00999	0.38	+2.6
1,082,202	+		CCNA_00999	0.44	+2.8
1,082,209	+		CCNA_00999	0.45	+3.2
1,082,242	+		CCNA_00999	0.52	+3.3
1,082,256	-		CCNA_00999	0.55	+2.4
1,082,292	-		CCNA_00999	0.62	+1.4
1,082,292	-		CCNA_00999	0.62	-0.8
1,082,292	-		CCNA_00999	0.62	+2.4
1,082,333	+		CCNA_00999	0.70	+2.9
1,082,341	-		CCNA_00999	0.72	-0.6
1,082,397	+		CCNA_00999	0.83	+3.1
1,082,446	+				-0.2
1,082,457	-				-1.1
1,082,484	-				-0.6
1,082,526	-				-0.5
1,082,526	-				-0.2
1,082,526	-				-0.6
1,082,547	-				-1.2
1,082,576	-		CCNA_01000	0.21	+0.0
1,082,582	-		CCNA_01000	0.24	-1.3
1,082,582	-		CCNA_01000	0.24	+0.1
1,082,582	-		CCNA_01000	0.24	-0.1
1,082,582	-		CCNA_01000	0.24	+0.5
1,082,582	-		CCNA_01000	0.24	+1.0
1,082,582	-		CCNA_01000	0.24	-0.9
1,082,582	-		CCNA_01000	0.24	-0.2
1,082,582	-		CCNA_01000	0.24	-0.9
1,082,584	-		CCNA_01000	0.25	-0.4
1,082,739	-				+0.5
1,082,739	-				+0.8
1,082,748	+				-0.3
1,082,756	-				+0.9
1,082,765	+				+2.8
1,082,765	+				+2.4
1,082,770	+				+1.6
1,082,770	+				+0.2
1,082,770	+				+0.4
1,082,770	+				-0.3
1,082,770	+				+0.0
1,082,770	+				-2.0
1,082,778	-				-0.3