Experiment: inner cut, LB soft agar motility assay
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS29580 and AZOBR_RS29585 are separated by 920 nucleotides
AZOBR_RS29580: AZOBR_RS29580 - hypothetical protein, at 766,187 to 767,638
_RS29580
AZOBR_RS29585: AZOBR_RS29585 - hypothetical protein, at 768,559 to 768,846
_RS29585
Position (kb) 766
767
768 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 765.282 kb on + strand at 765.283 kb on - strand at 765.474 kb on + strand at 765.475 kb on - strand at 765.540 kb on + strand at 765.540 kb on + strand at 765.541 kb on - strand at 765.541 kb on - strand at 765.702 kb on + strand at 765.702 kb on + strand at 765.702 kb on + strand at 765.702 kb on + strand at 765.703 kb on - strand at 765.703 kb on - strand at 765.703 kb on - strand at 765.745 kb on + strand at 765.746 kb on - strand at 765.746 kb on - strand at 765.747 kb on + strand at 765.747 kb on + strand at 765.747 kb on + strand at 765.747 kb on + strand at 765.747 kb on + strand at 765.747 kb on + strand at 765.747 kb on + strand at 765.747 kb on + strand at 765.747 kb on + strand at 765.748 kb on - strand at 765.748 kb on - strand at 765.748 kb on - strand at 765.748 kb on - strand at 765.748 kb on - strand at 765.748 kb on - strand at 766.065 kb on + strand at 766.065 kb on + strand at 766.065 kb on + strand at 766.065 kb on + strand at 766.065 kb on + strand at 766.065 kb on + strand at 766.065 kb on + strand at 766.066 kb on - strand at 766.066 kb on - strand at 766.066 kb on - strand at 766.066 kb on - strand at 766.193 kb on + strand at 766.193 kb on + strand at 766.194 kb on - strand at 766.194 kb on - strand at 766.670 kb on + strand, within AZOBR_RS29580 at 766.671 kb on - strand, within AZOBR_RS29580 at 766.671 kb on - strand, within AZOBR_RS29580 at 766.671 kb on - strand, within AZOBR_RS29580 at 766.835 kb on + strand, within AZOBR_RS29580 at 766.836 kb on - strand, within AZOBR_RS29580 at 766.836 kb on - strand, within AZOBR_RS29580 at 766.836 kb on - strand, within AZOBR_RS29580 at 766.836 kb on - strand, within AZOBR_RS29580 at 767.279 kb on + strand, within AZOBR_RS29580 at 767.280 kb on - strand, within AZOBR_RS29580 at 767.402 kb on - strand, within AZOBR_RS29580 at 767.402 kb on - strand, within AZOBR_RS29580 at 767.402 kb on - strand, within AZOBR_RS29580 at 767.543 kb on + strand at 767.543 kb on + strand at 767.544 kb on - strand at 767.544 kb on - strand at 767.564 kb on + strand at 767.564 kb on + strand at 767.564 kb on + strand at 767.564 kb on + strand at 767.564 kb on + strand at 767.565 kb on - strand at 767.565 kb on - strand at 767.676 kb on + strand at 767.676 kb on + strand at 767.676 kb on + strand at 767.677 kb on - strand at 767.677 kb on - strand at 767.677 kb on - strand at 768.018 kb on - strand at 768.018 kb on - strand at 768.099 kb on + strand at 768.146 kb on + strand at 768.146 kb on + strand at 768.146 kb on + strand at 768.146 kb on + strand at 768.147 kb on - strand at 768.147 kb on - strand at 768.147 kb on - strand at 768.296 kb on + strand at 768.297 kb on - strand at 768.297 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction inner cut, LB soft agar motility assay remove 765,282 + +0.8 765,283 - +1.2 765,474 + -2.5 765,475 - -2.0 765,540 + -2.5 765,540 + -3.5 765,541 - -0.4 765,541 - +0.5 765,702 + +0.8 765,702 + -0.8 765,702 + -3.0 765,702 + -0.1 765,703 - -0.3 765,703 - -2.3 765,703 - +0.5 765,745 + +0.5 765,746 - +0.4 765,746 - +0.7 765,747 + -0.1 765,747 + +0.4 765,747 + +0.1 765,747 + +0.5 765,747 + -3.3 765,747 + -0.0 765,747 + +2.7 765,747 + -0.9 765,747 + +0.7 765,748 - -2.4 765,748 - -1.0 765,748 - -2.4 765,748 - -1.5 765,748 - -0.7 765,748 - +0.7 766,065 + -3.5 766,065 + -1.6 766,065 + -0.4 766,065 + +0.5 766,065 + -1.8 766,065 + +0.7 766,065 + +2.1 766,066 - +2.6 766,066 - -1.7 766,066 - -0.9 766,066 - +0.4 766,193 + -0.2 766,193 + -0.6 766,194 - -0.9 766,194 - -2.4 766,670 + AZOBR_RS29580 0.33 +1.5 766,671 - AZOBR_RS29580 0.33 +1.3 766,671 - AZOBR_RS29580 0.33 -0.0 766,671 - AZOBR_RS29580 0.33 +0.6 766,835 + AZOBR_RS29580 0.45 -0.0 766,836 - AZOBR_RS29580 0.45 -1.9 766,836 - AZOBR_RS29580 0.45 -3.7 766,836 - AZOBR_RS29580 0.45 +1.1 766,836 - AZOBR_RS29580 0.45 +1.1 767,279 + AZOBR_RS29580 0.75 +0.1 767,280 - AZOBR_RS29580 0.75 -0.3 767,402 - AZOBR_RS29580 0.84 +0.8 767,402 - AZOBR_RS29580 0.84 +0.2 767,402 - AZOBR_RS29580 0.84 +1.0 767,543 + +0.0 767,543 + -1.5 767,544 - +0.0 767,544 - +0.3 767,564 + +0.5 767,564 + +1.3 767,564 + -2.0 767,564 + +0.1 767,564 + -0.7 767,565 - +0.1 767,565 - +0.4 767,676 + -0.3 767,676 + -1.9 767,676 + +1.0 767,677 - +0.9 767,677 - -0.4 767,677 - +0.4 768,018 - -0.4 768,018 - -1.0 768,099 + -1.1 768,146 + +1.5 768,146 + +0.4 768,146 + -2.7 768,146 + -2.1 768,147 - +0.3 768,147 - -0.3 768,147 - +0.5 768,296 + -0.3 768,297 - +1.1 768,297 - +1.3
Or see this region's nucleotide sequence