Experiment: D-Cycloserine 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_30370 and AO356_30375 are separated by 500 nucleotides AO356_30375 and AO356_30380 are separated by 369 nucleotides
AO356_30370: AO356_30370 - CoA-binding protein, at 7,088,279 to 7,090,393
_30370
AO356_30375: AO356_30375 - hypothetical protein, at 7,090,894 to 7,091,505
_30375
AO356_30380: AO356_30380 - lactonase, at 7,091,875 to 7,092,891
_30380
Position (kb)
7090
7091
7092 Strain fitness (log2 ratio)
-1
0
1 at 7090.015 kb on + strand, within AO356_30370 at 7090.015 kb on + strand, within AO356_30370 at 7090.182 kb on - strand at 7090.248 kb on + strand at 7090.281 kb on + strand at 7090.304 kb on + strand at 7090.305 kb on - strand at 7090.387 kb on + strand at 7090.399 kb on + strand at 7090.400 kb on - strand at 7090.569 kb on + strand at 7090.569 kb on + strand at 7090.690 kb on + strand at 7090.724 kb on + strand at 7090.724 kb on + strand at 7090.724 kb on + strand at 7090.724 kb on + strand at 7090.724 kb on + strand at 7090.724 kb on + strand at 7090.725 kb on - strand at 7090.725 kb on - strand at 7090.725 kb on - strand at 7090.725 kb on - strand at 7090.725 kb on - strand at 7090.725 kb on - strand at 7090.725 kb on - strand at 7090.725 kb on - strand at 7090.759 kb on + strand at 7091.000 kb on + strand, within AO356_30375 at 7091.099 kb on - strand, within AO356_30375 at 7091.099 kb on - strand, within AO356_30375 at 7091.123 kb on - strand, within AO356_30375 at 7091.508 kb on + strand at 7091.605 kb on - strand at 7091.622 kb on + strand at 7091.739 kb on - strand at 7091.924 kb on - strand at 7091.984 kb on + strand, within AO356_30380 at 7092.128 kb on + strand, within AO356_30380 at 7092.129 kb on - strand, within AO356_30380 at 7092.173 kb on + strand, within AO356_30380 at 7092.364 kb on + strand, within AO356_30380 at 7092.364 kb on + strand, within AO356_30380 at 7092.365 kb on - strand, within AO356_30380 at 7092.365 kb on - strand, within AO356_30380 at 7092.412 kb on + strand, within AO356_30380 at 7092.413 kb on - strand, within AO356_30380 at 7092.413 kb on - strand, within AO356_30380 at 7092.413 kb on - strand, within AO356_30380 at 7092.413 kb on - strand, within AO356_30380 at 7092.416 kb on - strand, within AO356_30380
Per-strain Table
Position Strand Gene LocusTag Fraction D-Cycloserine 0.1 mg/ml remove 7,090,015 + AO356_30370 0.82 +0.4 7,090,015 + AO356_30370 0.82 -0.7 7,090,182 - +0.9 7,090,248 + +0.1 7,090,281 + +0.4 7,090,304 + -0.8 7,090,305 - +0.2 7,090,387 + -0.8 7,090,399 + -0.3 7,090,400 - +0.1 7,090,569 + +1.1 7,090,569 + -0.1 7,090,690 + +1.2 7,090,724 + -0.1 7,090,724 + -0.8 7,090,724 + -1.2 7,090,724 + +0.8 7,090,724 + +0.5 7,090,724 + -0.1 7,090,725 - +0.3 7,090,725 - -0.5 7,090,725 - +0.4 7,090,725 - -0.3 7,090,725 - +0.4 7,090,725 - +0.5 7,090,725 - -0.6 7,090,725 - +0.3 7,090,759 + +0.0 7,091,000 + AO356_30375 0.17 +0.6 7,091,099 - AO356_30375 0.33 +0.8 7,091,099 - AO356_30375 0.33 +1.1 7,091,123 - AO356_30375 0.37 -0.0 7,091,508 + -0.3 7,091,605 - +1.2 7,091,622 + +0.6 7,091,739 - +0.1 7,091,924 - -0.1 7,091,984 + AO356_30380 0.11 +0.3 7,092,128 + AO356_30380 0.25 +0.3 7,092,129 - AO356_30380 0.25 -0.1 7,092,173 + AO356_30380 0.29 +0.5 7,092,364 + AO356_30380 0.48 -0.9 7,092,364 + AO356_30380 0.48 +0.6 7,092,365 - AO356_30380 0.48 -0.0 7,092,365 - AO356_30380 0.48 +0.4 7,092,412 + AO356_30380 0.53 -0.1 7,092,413 - AO356_30380 0.53 -1.2 7,092,413 - AO356_30380 0.53 -0.1 7,092,413 - AO356_30380 0.53 -0.3 7,092,413 - AO356_30380 0.53 -1.3 7,092,416 - AO356_30380 0.53 -0.2
Or see this region's nucleotide sequence