Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_18345

Experiment: D-Cycloserine 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cycloserine 0.1 mg/ml
4,130,662	+				+0.5
4,130,662	+				-0.1
4,130,663	-				+1.6
4,130,706	+				+0.7
4,130,732	+		AO356_18335	0.12	+0.3
4,130,772	+		AO356_18335	0.18	-0.2
4,130,773	-		AO356_18335	0.19	-0.5
4,130,886	+		AO356_18335	0.37	-0.1
4,130,886	+		AO356_18335	0.37	-0.3
4,130,954	+		AO356_18335	0.47	+1.0
4,130,954	+		AO356_18335	0.47	+0.7
4,130,955	-		AO356_18335	0.48	-0.5
4,130,985	+		AO356_18335	0.52	-0.3
4,130,985	+		AO356_18335	0.52	-1.5
4,130,986	-		AO356_18335	0.52	+0.2
4,130,988	+		AO356_18335	0.53	-0.4
4,130,988	+		AO356_18335	0.53	+0.3
4,130,989	-		AO356_18335	0.53	+0.9
4,131,023	+		AO356_18335	0.58	+0.7
4,131,023	+		AO356_18335	0.58	+0.3
4,131,023	+		AO356_18335	0.58	-0.5
4,131,047	-		AO356_18335	0.62	+0.3
4,131,196	+		AO356_18335	0.86	+0.6
4,131,196	+		AO356_18335	0.86	-0.0
4,131,197	-		AO356_18335	0.86	+0.9
4,131,197	-		AO356_18335	0.86	-0.5
4,131,197	-		AO356_18335	0.86	+0.8
4,131,197	-		AO356_18335	0.86	+1.3
4,131,200	+		AO356_18335	0.87	+0.7
4,131,200	+		AO356_18335	0.87	+0.5
4,131,200	+		AO356_18335	0.87	+0.2
4,131,200	+		AO356_18335	0.87	+0.4
4,131,201	-		AO356_18335	0.87	+0.5
4,131,201	-		AO356_18335	0.87	+0.1
4,131,201	-		AO356_18335	0.87	-0.7
4,131,201	-		AO356_18335	0.87	-0.8
4,131,201	-		AO356_18335	0.87	+0.7
4,131,201	-		AO356_18335	0.87	+0.1
4,131,216	+		AO356_18335	0.89	+0.2
4,131,268	+				+0.3
4,131,269	-				-0.2
4,131,299	+				-0.2
4,131,299	+				+0.9
4,131,300	-				-0.7
4,131,300	-				+0.6
4,131,306	+				+0.3
4,131,306	+				+0.2
4,131,307	-				+0.5
4,131,332	+				+0.4
4,131,332	+				-0.1
4,131,332	+				+0.2
4,131,332	+				+0.8
4,131,332	+				+0.1
4,131,332	+				+1.3
4,131,332	+				-0.1
4,131,333	-				-0.7
4,131,333	-				+0.3
4,131,354	+				-0.2
4,131,354	+				+1.5
4,131,354	+				+0.2
4,131,375	-		AO356_18340	0.20	-0.4
4,131,434	+		AO356_18340	0.52	-0.7
4,131,494	+		AO356_18340	0.84	+0.0
4,131,494	+		AO356_18340	0.84	+0.5
4,131,494	+		AO356_18340	0.84	+0.3
4,131,494	+		AO356_18340	0.84	-0.1
4,131,494	+		AO356_18340	0.84	+0.1
4,131,494	+		AO356_18340	0.84	+1.5
4,131,495	-		AO356_18340	0.84	+0.2
4,131,495	-		AO356_18340	0.84	-0.2
4,131,541	-				-0.2
4,131,541	-				-1.5
4,131,562	+				+0.0
4,131,562	+				-0.2
4,131,562	+				+0.3
4,131,562	+				+0.5
4,131,562	+				-0.4
4,131,562	+				+0.8
4,131,563	-				-0.6
4,131,563	-				-0.4
4,131,563	-				+0.1
4,131,563	-				+0.0
4,131,564	+				+0.3
4,131,564	+				+0.2
4,131,564	+				-0.7
4,131,565	-				+0.8
4,131,565	-				+4.0
4,131,608	-				+0.4
4,131,624	+				+0.2
4,131,656	+				+0.5
4,131,656	+				-1.3
4,131,656	+				-0.5
4,131,656	+				-0.4
4,131,657	-				-1.2
4,131,657	-				-1.1
4,131,657	-				-0.5
4,131,665	-				-0.7
4,131,717	-		AO356_18345	0.13	+0.4
4,131,717	-		AO356_18345	0.13	-0.5
4,131,717	-		AO356_18345	0.13	-0.1
4,131,758	+		AO356_18345	0.20	-0.2
4,131,759	-		AO356_18345	0.20	-0.7
4,131,759	-		AO356_18345	0.20	+0.1
4,131,759	-		AO356_18345	0.20	-0.6
4,131,759	-		AO356_18345	0.20	-0.2
4,131,829	-		AO356_18345	0.31	+0.1
4,132,047	-		AO356_18345	0.65	-0.6
4,132,047	-		AO356_18345	0.65	-0.2
4,132,076	+		AO356_18345	0.70	-1.3
4,132,076	+		AO356_18345	0.70	+0.4
4,132,077	-		AO356_18345	0.70	-0.7
4,132,077	-		AO356_18345	0.70	-0.5
4,132,113	+		AO356_18345	0.75	-0.5
4,132,193	+		AO356_18345	0.88	-0.8
4,132,193	+		AO356_18345	0.88	-0.6
4,132,194	-		AO356_18345	0.88	-1.7
4,132,194	-		AO356_18345	0.88	-0.5
4,132,243	+				-0.2
4,132,243	+				-0.7
4,132,244	-				-1.1
4,132,335	+		AO356_18350	0.13	+0.7
4,132,335	+		AO356_18350	0.13	-0.2
4,132,535	-		AO356_18350	0.50	-0.1
4,132,535	-		AO356_18350	0.50	+0.1
4,132,552	+		AO356_18350	0.54	-0.3
4,132,587	+		AO356_18350	0.60	-0.4
4,132,587	+		AO356_18350	0.60	+0.1
4,132,587	+		AO356_18350	0.60	-0.4
4,132,587	+		AO356_18350	0.60	-0.8
4,132,587	+		AO356_18350	0.60	+0.4
4,132,588	-		AO356_18350	0.60	+0.3
4,132,588	-		AO356_18350	0.60	-0.8
4,132,588	-		AO356_18350	0.60	+0.3
4,132,588	-		AO356_18350	0.60	+0.6
4,132,713	+		AO356_18350	0.84	-0.3
4,132,713	+		AO356_18350	0.84	+0.9
4,132,714	-		AO356_18350	0.84	+0.5
4,132,793	+				+0.3
4,132,793	+				+1.2
4,132,793	+				+0.1
4,132,838	+				-0.2
4,132,839	-				+0.3
4,132,839	-				+0.2
4,133,187	+		AO356_18355	0.65	+0.2
4,133,187	+		AO356_18355	0.65	+0.4
4,133,188	-		AO356_18355	0.65	+0.1
4,133,188	-		AO356_18355	0.65	-0.3
4,133,188	-		AO356_18355	0.65	+0.7
4,133,188	-		AO356_18355	0.65	+0.3
4,133,188	-		AO356_18355	0.65	-0.5
4,133,243	+		AO356_18355	0.74	-0.1
4,133,243	+		AO356_18355	0.74	-1.1