Experiment: D-Cycloserine 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_12330 and AO356_12335 overlap by 1 nucleotides AO356_12335 and AO356_12340 overlap by 1 nucleotides
AO356_12330: AO356_12330 - serine/threonine protein kinase, at 2,814,735 to 2,817,839
_12330
AO356_12335: AO356_12335 - ABC transporter ATP-binding protein, at 2,817,839 to 2,818,555
_12335
AO356_12340: AO356_12340 - hypothetical protein, at 2,818,555 to 2,819,751
_12340
Position (kb)
2817
2818
2819 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2816.914 kb on - strand, within AO356_12330 at 2817.039 kb on + strand, within AO356_12330 at 2817.039 kb on + strand, within AO356_12330 at 2817.039 kb on + strand, within AO356_12330 at 2817.039 kb on + strand, within AO356_12330 at 2817.039 kb on + strand, within AO356_12330 at 2817.039 kb on + strand, within AO356_12330 at 2817.040 kb on - strand, within AO356_12330 at 2817.040 kb on - strand, within AO356_12330 at 2817.040 kb on - strand, within AO356_12330 at 2817.144 kb on + strand, within AO356_12330 at 2817.144 kb on + strand, within AO356_12330 at 2817.144 kb on + strand, within AO356_12330 at 2817.144 kb on + strand, within AO356_12330 at 2817.145 kb on - strand, within AO356_12330 at 2817.145 kb on - strand, within AO356_12330 at 2817.145 kb on - strand, within AO356_12330 at 2817.552 kb on + strand at 2817.552 kb on + strand at 2817.552 kb on + strand at 2817.552 kb on + strand at 2817.552 kb on + strand at 2817.552 kb on + strand at 2817.553 kb on - strand at 2817.553 kb on - strand at 2817.553 kb on - strand at 2817.553 kb on - strand at 2817.553 kb on - strand at 2817.553 kb on - strand at 2817.553 kb on - strand at 2817.553 kb on - strand at 2817.553 kb on - strand at 2817.553 kb on - strand at 2817.553 kb on - strand at 2817.621 kb on + strand at 2817.622 kb on - strand at 2817.622 kb on - strand at 2817.811 kb on - strand at 2817.811 kb on - strand at 2817.811 kb on - strand at 2817.890 kb on + strand at 2817.890 kb on + strand at 2817.891 kb on - strand at 2817.970 kb on + strand, within AO356_12335 at 2817.970 kb on + strand, within AO356_12335 at 2817.970 kb on + strand, within AO356_12335 at 2817.970 kb on + strand, within AO356_12335 at 2817.970 kb on + strand, within AO356_12335 at 2817.970 kb on + strand, within AO356_12335 at 2817.971 kb on - strand, within AO356_12335 at 2817.971 kb on - strand, within AO356_12335 at 2817.971 kb on - strand, within AO356_12335 at 2817.971 kb on - strand, within AO356_12335 at 2817.971 kb on - strand, within AO356_12335 at 2818.113 kb on - strand, within AO356_12335 at 2818.121 kb on + strand, within AO356_12335 at 2818.121 kb on + strand, within AO356_12335 at 2818.121 kb on + strand, within AO356_12335 at 2818.121 kb on + strand, within AO356_12335 at 2818.122 kb on - strand, within AO356_12335 at 2818.122 kb on - strand, within AO356_12335 at 2818.122 kb on - strand, within AO356_12335 at 2818.122 kb on - strand, within AO356_12335 at 2818.122 kb on - strand, within AO356_12335 at 2818.278 kb on + strand, within AO356_12335 at 2818.278 kb on + strand, within AO356_12335 at 2818.278 kb on + strand, within AO356_12335 at 2818.279 kb on - strand, within AO356_12335 at 2819.069 kb on + strand, within AO356_12340 at 2819.069 kb on + strand, within AO356_12340 at 2819.069 kb on + strand, within AO356_12340 at 2819.069 kb on + strand, within AO356_12340 at 2819.070 kb on - strand, within AO356_12340 at 2819.070 kb on - strand, within AO356_12340 at 2819.070 kb on - strand, within AO356_12340 at 2819.070 kb on - strand, within AO356_12340 at 2819.222 kb on - strand, within AO356_12340 at 2819.239 kb on + strand, within AO356_12340 at 2819.239 kb on + strand, within AO356_12340 at 2819.239 kb on + strand, within AO356_12340 at 2819.239 kb on + strand, within AO356_12340 at 2819.240 kb on - strand, within AO356_12340 at 2819.240 kb on - strand, within AO356_12340 at 2819.240 kb on - strand, within AO356_12340 at 2819.240 kb on - strand, within AO356_12340 at 2819.240 kb on - strand, within AO356_12340 at 2819.278 kb on + strand, within AO356_12340 at 2819.278 kb on + strand, within AO356_12340 at 2819.279 kb on - strand, within AO356_12340 at 2819.279 kb on - strand, within AO356_12340 at 2819.524 kb on + strand, within AO356_12340 at 2819.524 kb on + strand, within AO356_12340 at 2819.524 kb on + strand, within AO356_12340 at 2819.525 kb on - strand, within AO356_12340 at 2819.525 kb on - strand, within AO356_12340 at 2819.525 kb on - strand, within AO356_12340
Per-strain Table
Position Strand Gene LocusTag Fraction D-Cycloserine 0.1 mg/ml remove 2,816,914 - AO356_12330 0.70 +0.4 2,817,039 + AO356_12330 0.74 -0.7 2,817,039 + AO356_12330 0.74 +0.2 2,817,039 + AO356_12330 0.74 -0.1 2,817,039 + AO356_12330 0.74 +0.7 2,817,039 + AO356_12330 0.74 +0.1 2,817,039 + AO356_12330 0.74 +0.7 2,817,040 - AO356_12330 0.74 +0.1 2,817,040 - AO356_12330 0.74 -0.1 2,817,040 - AO356_12330 0.74 +0.4 2,817,144 + AO356_12330 0.78 -0.2 2,817,144 + AO356_12330 0.78 +1.0 2,817,144 + AO356_12330 0.78 -0.2 2,817,144 + AO356_12330 0.78 +0.3 2,817,145 - AO356_12330 0.78 -0.4 2,817,145 - AO356_12330 0.78 -0.8 2,817,145 - AO356_12330 0.78 +1.0 2,817,552 + +0.1 2,817,552 + -0.3 2,817,552 + +0.8 2,817,552 + +1.5 2,817,552 + +0.1 2,817,552 + +0.1 2,817,553 - +0.2 2,817,553 - +0.7 2,817,553 - -0.2 2,817,553 - -0.6 2,817,553 - +0.6 2,817,553 - +0.6 2,817,553 - +0.3 2,817,553 - +0.6 2,817,553 - -0.6 2,817,553 - -0.5 2,817,553 - -0.2 2,817,621 + -2.0 2,817,622 - +0.7 2,817,622 - +0.5 2,817,811 - +0.6 2,817,811 - -0.6 2,817,811 - +0.7 2,817,890 + +0.7 2,817,890 + -0.3 2,817,891 - -0.2 2,817,970 + AO356_12335 0.18 -0.8 2,817,970 + AO356_12335 0.18 -0.3 2,817,970 + AO356_12335 0.18 +0.3 2,817,970 + AO356_12335 0.18 +0.6 2,817,970 + AO356_12335 0.18 +0.1 2,817,970 + AO356_12335 0.18 +1.2 2,817,971 - AO356_12335 0.18 +0.2 2,817,971 - AO356_12335 0.18 +0.0 2,817,971 - AO356_12335 0.18 +0.7 2,817,971 - AO356_12335 0.18 -0.4 2,817,971 - AO356_12335 0.18 -0.4 2,818,113 - AO356_12335 0.38 +0.3 2,818,121 + AO356_12335 0.39 -0.1 2,818,121 + AO356_12335 0.39 +0.6 2,818,121 + AO356_12335 0.39 +0.5 2,818,121 + AO356_12335 0.39 +0.6 2,818,122 - AO356_12335 0.39 -0.7 2,818,122 - AO356_12335 0.39 -0.4 2,818,122 - AO356_12335 0.39 +1.1 2,818,122 - AO356_12335 0.39 +0.7 2,818,122 - AO356_12335 0.39 +1.1 2,818,278 + AO356_12335 0.61 +0.0 2,818,278 + AO356_12335 0.61 -0.1 2,818,278 + AO356_12335 0.61 +0.4 2,818,279 - AO356_12335 0.61 -0.8 2,819,069 + AO356_12340 0.43 +0.3 2,819,069 + AO356_12340 0.43 +1.1 2,819,069 + AO356_12340 0.43 +1.4 2,819,069 + AO356_12340 0.43 -0.5 2,819,070 - AO356_12340 0.43 +0.4 2,819,070 - AO356_12340 0.43 +0.5 2,819,070 - AO356_12340 0.43 +0.3 2,819,070 - AO356_12340 0.43 +0.3 2,819,222 - AO356_12340 0.56 -1.5 2,819,239 + AO356_12340 0.57 +0.6 2,819,239 + AO356_12340 0.57 +0.2 2,819,239 + AO356_12340 0.57 +0.7 2,819,239 + AO356_12340 0.57 +0.0 2,819,240 - AO356_12340 0.57 +0.3 2,819,240 - AO356_12340 0.57 +0.2 2,819,240 - AO356_12340 0.57 -1.2 2,819,240 - AO356_12340 0.57 +0.6 2,819,240 - AO356_12340 0.57 -0.2 2,819,278 + AO356_12340 0.60 -0.8 2,819,278 + AO356_12340 0.60 +0.1 2,819,279 - AO356_12340 0.60 -0.5 2,819,279 - AO356_12340 0.60 +2.0 2,819,524 + AO356_12340 0.81 -0.3 2,819,524 + AO356_12340 0.81 +0.1 2,819,524 + AO356_12340 0.81 +1.6 2,819,525 - AO356_12340 0.81 +0.1 2,819,525 - AO356_12340 0.81 +0.2 2,819,525 - AO356_12340 0.81 +0.8
Or see this region's nucleotide sequence