Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_06945

Experiment: D-Cycloserine 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cycloserine 0.1 mg/ml
1,535,162	+		AO356_06940	0.29	+0.4
1,535,162	+		AO356_06940	0.29	+0.1
1,535,162	+		AO356_06940	0.29	-2.1
1,535,163	-		AO356_06940	0.30	-0.6
1,535,163	-		AO356_06940	0.30	+0.1
1,535,163	-		AO356_06940	0.30	+0.3
1,535,325	-		AO356_06940	0.46	+0.7
1,535,325	-		AO356_06940	0.46	+0.3
1,535,535	+		AO356_06940	0.67	+0.7
1,535,535	+		AO356_06940	0.67	+0.5
1,535,846	+				+0.0
1,535,847	-				+0.1
1,535,847	-				+0.3
1,535,875	-				+0.8
1,535,884	+				-0.3
1,535,884	+				-0.8
1,535,885	-				+0.5
1,535,885	-				+0.3
1,535,885	-				+0.6
1,535,907	-				-0.2
1,535,928	-				-0.4
1,535,935	+				+0.9
1,535,935	+				-0.3
1,535,935	+				-0.9
1,535,936	-				+0.9
1,535,936	-				-0.1
1,535,936	-				+0.1
1,535,967	+				-1.5
1,535,967	+				+0.6
1,535,968	-				+1.5
1,535,968	-				-0.1
1,535,968	-				-0.1
1,535,977	+				+0.1
1,535,977	+				+0.4
1,535,977	+				-0.9
1,535,977	+				-1.5
1,535,977	+				+0.0
1,535,977	+				-0.1
1,535,978	-				+0.6
1,535,978	-				+0.3
1,535,978	-				+0.1
1,535,978	-				+0.4
1,535,978	-				-1.0
1,535,978	-				+0.9
1,535,978	-				+0.1
1,535,978	-				+0.3
1,535,978	-				-1.0
1,535,978	-				+0.2
1,536,001	-				+0.8
1,536,048	+				-1.0
1,536,049	-				+1.3
1,536,049	-				+0.4
1,536,049	-				+1.5
1,536,049	-				+0.4
1,536,084	+				-0.7
1,536,084	+				-0.2
1,536,084	+				-0.2
1,536,084	+				+0.8
1,536,084	+				-0.6
1,536,085	-				+0.1
1,536,085	-				-1.0
1,536,094	-				-0.5
1,536,147	+				+0.8
1,536,147	+				-0.1
1,536,148	-				-0.2
1,536,151	+				+0.7
1,536,151	+				-0.3
1,536,151	+				+0.7
1,536,152	-				+0.1
1,536,152	-				-0.4
1,536,152	-				+0.2
1,536,680	+				-0.7
1,536,680	+				+1.2
1,536,681	-				-0.3
1,536,681	-				+0.1
1,536,697	+				+0.6
1,536,698	-				+0.2
1,536,698	-				+0.3
1,536,698	-				+0.4
1,536,698	-				-0.5
1,536,740	-				-0.5
1,536,753	+				-0.0
1,536,753	+				-0.5
1,536,753	+				+0.0
1,536,753	+				+0.4
1,536,753	+				+0.2
1,536,753	+				-2.5
1,536,753	+				+0.9
1,536,753	+				+0.8
1,536,753	+				-0.4
1,536,753	+				+0.3
1,536,753	+				+0.2
1,536,753	+				+0.6
1,536,753	+				+0.2
1,536,753	+				+0.2
1,536,753	+				+0.9
1,536,753	+				+0.2
1,536,754	-				+0.5
1,536,754	-				+0.4
1,536,754	-				+0.3
1,536,754	-				-0.5
1,536,754	-				-0.1
1,536,840	+				-0.4
1,536,840	+				-0.1
1,536,840	+				-0.0
1,536,840	+				-0.8
1,536,840	+				-0.4
1,536,840	+				+0.3
1,536,840	+				+0.4
1,536,841	-				+0.8
1,536,841	-				+0.5
1,536,841	-				+0.4
1,536,858	+				+0.1
1,536,859	-				+0.5
1,536,859	-				+0.9
1,536,859	-				+0.3
1,537,003	-		AO356_06950	0.20	+0.0
1,537,084	-		AO356_06950	0.30	+1.1
1,537,084	-		AO356_06950	0.30	-0.1
1,537,084	-		AO356_06950	0.30	+0.9
1,537,170	+		AO356_06950	0.41	+0.4
1,537,171	-		AO356_06950	0.41	-0.2
1,537,171	-		AO356_06950	0.41	+1.4
1,537,283	-		AO356_06950	0.54	-0.1
1,537,284	+		AO356_06950	0.55	+1.0
1,537,284	+		AO356_06950	0.55	+0.1
1,537,284	+		AO356_06950	0.55	+0.6
1,537,284	+		AO356_06950	0.55	+0.1
1,537,285	-		AO356_06950	0.55	-0.2
1,537,285	-		AO356_06950	0.55	-1.9
1,537,503	+		AO356_06950	0.81	+0.4
1,537,503	+		AO356_06950	0.81	-0.2
1,537,504	-		AO356_06950	0.81	+0.4
1,537,504	-		AO356_06950	0.81	-0.2
1,537,504	-		AO356_06950	0.81	-0.0
1,537,504	-		AO356_06950	0.81	+0.0
1,537,545	+		AO356_06950	0.87	+1.0
1,537,545	+		AO356_06950	0.87	+0.8
1,537,545	+		AO356_06950	0.87	+0.4
1,537,545	+		AO356_06950	0.87	-0.1
1,537,545	+		AO356_06950	0.87	+0.2
1,537,545	+		AO356_06950	0.87	+0.5
1,537,545	+		AO356_06950	0.87	+0.0
1,537,546	-		AO356_06950	0.87	-0.4
1,537,546	-		AO356_06950	0.87	+0.9
1,537,546	-		AO356_06950	0.87	+1.5
1,537,546	-		AO356_06950	0.87	-0.8
1,537,546	-		AO356_06950	0.87	-0.4
1,537,546	-		AO356_06950	0.87	+0.7
1,537,546	-		AO356_06950	0.87	-0.1
1,537,657	-				-1.6
1,537,657	-				+0.4
1,537,657	-				+0.6
1,537,685	-				+0.5
1,537,689	+				-0.5
1,537,690	-				-1.6
1,537,703	+				+0.4
1,537,704	-				+0.1