Experiment: D-Cycloserine 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_03290 and AO356_03295 are separated by 117 nucleotides AO356_03295 and AO356_03300 are separated by 64 nucleotides AO356_03300 and AO356_03305 are separated by 191 nucleotides AO356_03305 and AO356_03310 are separated by 204 nucleotides
AO356_03290: AO356_03290 - alpha/beta hydrolase, at 728,506 to 729,543
_03290
AO356_03295: AO356_03295 - transcriptional regulator, at 729,661 to 730,359
_03295
AO356_03300: AO356_03300 - histidine kinase, at 730,424 to 733,075
_03300
AO356_03305: AO356_03305 - ATPase, at 733,267 to 733,812
_03305
AO356_03310: AO356_03310 - potassium-transporting ATPase subunit B, at 734,017 to 736,071
_03310
Position (kb) 730
731
732
733
734 Strain fitness (log2 ratio) -1
0
1
2 at 729.463 kb on + strand at 729.464 kb on - strand at 729.464 kb on - strand at 729.524 kb on - strand at 729.541 kb on + strand at 729.541 kb on + strand at 729.542 kb on - strand at 729.542 kb on - strand at 729.542 kb on - strand at 729.542 kb on - strand at 729.656 kb on + strand at 729.656 kb on + strand at 729.656 kb on + strand at 729.656 kb on + strand at 729.656 kb on + strand at 729.656 kb on + strand at 729.657 kb on - strand at 729.657 kb on - strand at 729.657 kb on - strand at 729.657 kb on - strand at 729.657 kb on - strand at 729.657 kb on - strand at 729.663 kb on - strand at 729.663 kb on - strand at 729.663 kb on - strand at 729.663 kb on - strand at 729.663 kb on - strand at 729.663 kb on - strand at 729.779 kb on + strand, within AO356_03295 at 729.779 kb on + strand, within AO356_03295 at 729.780 kb on - strand, within AO356_03295 at 729.881 kb on + strand, within AO356_03295 at 729.881 kb on + strand, within AO356_03295 at 729.881 kb on + strand, within AO356_03295 at 729.881 kb on + strand, within AO356_03295 at 729.882 kb on - strand, within AO356_03295 at 730.059 kb on - strand, within AO356_03295 at 730.274 kb on + strand, within AO356_03295 at 730.274 kb on + strand, within AO356_03295 at 730.275 kb on - strand, within AO356_03295 at 730.410 kb on + strand at 730.410 kb on + strand at 730.410 kb on + strand at 730.410 kb on + strand at 730.411 kb on - strand at 730.411 kb on - strand at 730.605 kb on + strand at 730.605 kb on + strand at 730.605 kb on + strand at 730.605 kb on + strand at 730.605 kb on + strand at 730.605 kb on + strand at 730.606 kb on - strand at 730.606 kb on - strand at 730.612 kb on + strand at 730.613 kb on - strand at 730.791 kb on + strand, within AO356_03300 at 730.791 kb on + strand, within AO356_03300 at 730.791 kb on + strand, within AO356_03300 at 730.791 kb on + strand, within AO356_03300 at 730.791 kb on + strand, within AO356_03300 at 730.791 kb on + strand, within AO356_03300 at 730.791 kb on + strand, within AO356_03300 at 730.791 kb on + strand, within AO356_03300 at 730.792 kb on - strand, within AO356_03300 at 730.792 kb on - strand, within AO356_03300 at 730.792 kb on - strand, within AO356_03300 at 730.792 kb on - strand, within AO356_03300 at 730.792 kb on - strand, within AO356_03300 at 730.792 kb on - strand, within AO356_03300 at 730.792 kb on - strand, within AO356_03300 at 730.792 kb on - strand, within AO356_03300 at 730.792 kb on - strand, within AO356_03300 at 730.792 kb on - strand, within AO356_03300 at 730.792 kb on - strand, within AO356_03300 at 730.792 kb on - strand, within AO356_03300 at 730.792 kb on - strand, within AO356_03300 at 730.792 kb on - strand, within AO356_03300 at 730.792 kb on - strand, within AO356_03300 at 730.959 kb on + strand, within AO356_03300 at 730.959 kb on + strand, within AO356_03300 at 730.959 kb on + strand, within AO356_03300 at 730.960 kb on - strand, within AO356_03300 at 731.471 kb on + strand, within AO356_03300 at 731.471 kb on + strand, within AO356_03300 at 731.471 kb on + strand, within AO356_03300 at 731.472 kb on - strand, within AO356_03300 at 731.472 kb on - strand, within AO356_03300 at 731.472 kb on - strand, within AO356_03300 at 731.472 kb on - strand, within AO356_03300 at 731.830 kb on + strand, within AO356_03300 at 731.830 kb on + strand, within AO356_03300 at 731.831 kb on - strand, within AO356_03300 at 731.831 kb on - strand, within AO356_03300 at 731.831 kb on - strand, within AO356_03300 at 731.907 kb on + strand, within AO356_03300 at 731.907 kb on + strand, within AO356_03300 at 731.907 kb on + strand, within AO356_03300 at 731.907 kb on + strand, within AO356_03300 at 731.907 kb on + strand, within AO356_03300 at 731.908 kb on - strand, within AO356_03300 at 732.495 kb on + strand, within AO356_03300 at 732.495 kb on + strand, within AO356_03300 at 732.495 kb on + strand, within AO356_03300 at 732.495 kb on + strand, within AO356_03300 at 732.495 kb on + strand, within AO356_03300 at 732.496 kb on - strand, within AO356_03300 at 732.496 kb on - strand, within AO356_03300 at 732.623 kb on + strand, within AO356_03300 at 732.669 kb on + strand, within AO356_03300 at 732.670 kb on - strand, within AO356_03300 at 732.969 kb on + strand at 732.969 kb on + strand at 732.969 kb on + strand at 732.970 kb on - strand at 732.970 kb on - strand at 732.970 kb on - strand at 733.097 kb on + strand at 733.098 kb on - strand at 733.098 kb on - strand at 733.143 kb on + strand at 733.144 kb on - strand at 733.144 kb on - strand at 733.269 kb on - strand at 733.561 kb on - strand, within AO356_03305 at 733.745 kb on + strand, within AO356_03305 at 733.777 kb on + strand at 733.778 kb on - strand at 733.778 kb on - strand at 734.046 kb on + strand at 734.046 kb on + strand at 734.047 kb on - strand at 734.047 kb on - strand at 734.047 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Cycloserine 0.1 mg/ml remove 729,463 + -0.7 729,464 - -1.3 729,464 - +0.3 729,524 - +0.5 729,541 + +0.1 729,541 + +1.8 729,542 - +1.0 729,542 - -0.1 729,542 - +0.7 729,542 - -0.1 729,656 + -1.4 729,656 + +0.4 729,656 + +0.5 729,656 + +0.4 729,656 + -0.2 729,656 + +0.8 729,657 - -0.2 729,657 - -0.5 729,657 - +0.3 729,657 - +0.4 729,657 - +0.8 729,657 - +0.4 729,663 - -0.4 729,663 - +0.3 729,663 - +0.3 729,663 - +0.3 729,663 - +0.8 729,663 - -1.7 729,779 + AO356_03295 0.17 +0.0 729,779 + AO356_03295 0.17 -0.7 729,780 - AO356_03295 0.17 +0.1 729,881 + AO356_03295 0.31 +0.8 729,881 + AO356_03295 0.31 +0.2 729,881 + AO356_03295 0.31 +1.2 729,881 + AO356_03295 0.31 -1.7 729,882 - AO356_03295 0.32 +1.2 730,059 - AO356_03295 0.57 -0.3 730,274 + AO356_03295 0.88 +0.5 730,274 + AO356_03295 0.88 -0.4 730,275 - AO356_03295 0.88 -0.3 730,410 + +0.3 730,410 + -0.2 730,410 + -0.4 730,410 + +0.3 730,411 - -0.1 730,411 - -0.9 730,605 + +0.0 730,605 + -0.4 730,605 + -0.3 730,605 + -0.2 730,605 + -0.4 730,605 + +0.3 730,606 - -0.0 730,606 - +0.3 730,612 + +0.6 730,613 - -0.2 730,791 + AO356_03300 0.14 +0.3 730,791 + AO356_03300 0.14 +0.6 730,791 + AO356_03300 0.14 +1.0 730,791 + AO356_03300 0.14 +0.0 730,791 + AO356_03300 0.14 +0.3 730,791 + AO356_03300 0.14 +2.1 730,791 + AO356_03300 0.14 +0.8 730,791 + AO356_03300 0.14 -0.2 730,792 - AO356_03300 0.14 +1.8 730,792 - AO356_03300 0.14 -0.3 730,792 - AO356_03300 0.14 +0.4 730,792 - AO356_03300 0.14 +0.6 730,792 - AO356_03300 0.14 -0.1 730,792 - AO356_03300 0.14 +0.1 730,792 - AO356_03300 0.14 -0.5 730,792 - AO356_03300 0.14 +0.2 730,792 - AO356_03300 0.14 -0.1 730,792 - AO356_03300 0.14 +0.3 730,792 - AO356_03300 0.14 +0.5 730,792 - AO356_03300 0.14 +0.2 730,792 - AO356_03300 0.14 +0.6 730,792 - AO356_03300 0.14 -0.2 730,792 - AO356_03300 0.14 +0.1 730,959 + AO356_03300 0.20 -0.7 730,959 + AO356_03300 0.20 -0.6 730,959 + AO356_03300 0.20 -0.0 730,960 - AO356_03300 0.20 +0.5 731,471 + AO356_03300 0.39 -1.2 731,471 + AO356_03300 0.39 +0.4 731,471 + AO356_03300 0.39 -0.4 731,472 - AO356_03300 0.40 +1.0 731,472 - AO356_03300 0.40 +0.1 731,472 - AO356_03300 0.40 +0.9 731,472 - AO356_03300 0.40 +0.5 731,830 + AO356_03300 0.53 +0.0 731,830 + AO356_03300 0.53 -0.4 731,831 - AO356_03300 0.53 +0.3 731,831 - AO356_03300 0.53 +0.3 731,831 - AO356_03300 0.53 -0.5 731,907 + AO356_03300 0.56 +0.1 731,907 + AO356_03300 0.56 +0.5 731,907 + AO356_03300 0.56 +0.9 731,907 + AO356_03300 0.56 -0.3 731,907 + AO356_03300 0.56 +0.0 731,908 - AO356_03300 0.56 +0.5 732,495 + AO356_03300 0.78 +0.7 732,495 + AO356_03300 0.78 +0.6 732,495 + AO356_03300 0.78 -0.7 732,495 + AO356_03300 0.78 +0.1 732,495 + AO356_03300 0.78 +0.1 732,496 - AO356_03300 0.78 -0.8 732,496 - AO356_03300 0.78 -1.1 732,623 + AO356_03300 0.83 +0.4 732,669 + AO356_03300 0.85 -1.0 732,670 - AO356_03300 0.85 +0.4 732,969 + +1.0 732,969 + -0.4 732,969 + +0.7 732,970 - +1.8 732,970 - -0.7 732,970 - +0.5 733,097 + +0.2 733,098 - +0.9 733,098 - +0.0 733,143 + -0.2 733,144 - +1.2 733,144 - +0.7 733,269 - -0.5 733,561 - AO356_03305 0.54 -0.1 733,745 + AO356_03305 0.88 -1.6 733,777 + -0.2 733,778 - +0.9 733,778 - +0.7 734,046 + +0.3 734,046 + -0.0 734,047 - +1.1 734,047 - -1.0 734,047 - +0.0
Or see this region's nucleotide sequence