Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_2298

Experiment: m.b. Cobalt chloride 0.1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Cobalt chloride 0.1 mM
2,428,179	+		Dshi_2296	0.42	+0.2
2,428,190	+		Dshi_2296	0.45	-0.0
2,428,215	+		Dshi_2296	0.50	+1.3
2,428,255	+		Dshi_2296	0.60	-0.8
2,428,262	-		Dshi_2296	0.61	+1.1
2,428,322	-		Dshi_2296	0.75	+0.7
2,428,341	-		Dshi_2296	0.80	+0.2
2,428,343	+		Dshi_2296	0.80	+1.4
2,428,382	+		Dshi_2296	0.89	-0.7
2,428,383	-		Dshi_2296	0.90	+0.2
2,428,390	-				+0.2
2,428,418	-				+0.5
2,428,418	-				+0.2
2,428,455	+				-0.2
2,428,456	+				+0.3
2,428,456	+				+0.4
2,428,464	-				-0.2
2,428,491	+				+0.1
2,428,503	+				+0.4
2,428,510	+				-0.0
2,428,510	+				+0.7
2,428,510	+				+0.1
2,428,510	+				-0.2
2,428,518	-				+0.4
2,428,518	-				-0.2
2,428,518	-				+0.1
2,428,561	-		Dshi_2297	0.16	-1.0
2,428,631	+		Dshi_2297	0.39	+0.4
2,428,641	+		Dshi_2297	0.43	+0.4
2,428,658	+		Dshi_2297	0.48	+0.4
2,428,658	+		Dshi_2297	0.48	+0.2
2,428,658	+		Dshi_2297	0.48	+1.4
2,428,664	-		Dshi_2297	0.51	-0.4
2,428,666	-		Dshi_2297	0.51	+1.0
2,428,678	+		Dshi_2297	0.55	-0.1
2,428,678	+		Dshi_2297	0.55	-0.2
2,428,694	-		Dshi_2297	0.61	-0.3
2,428,704	-		Dshi_2297	0.64	+0.5
2,428,706	+		Dshi_2297	0.65	+0.0
2,428,706	+		Dshi_2297	0.65	-1.7
2,428,706	+		Dshi_2297	0.65	+0.7
2,428,706	+		Dshi_2297	0.65	+0.1
2,428,706	+		Dshi_2297	0.65	-0.6
2,428,706	+		Dshi_2297	0.65	-0.7
2,428,713	-		Dshi_2297	0.67	-0.2
2,428,714	-		Dshi_2297	0.67	+0.8
2,428,729	+		Dshi_2297	0.72	-0.2
2,428,737	-		Dshi_2297	0.75	+0.4
2,428,761	+		Dshi_2297	0.83	+1.7
2,428,761	+		Dshi_2297	0.83	+1.3
2,428,769	-		Dshi_2297	0.86	+0.5
2,428,793	-				+0.7
2,428,817	-				-0.6
2,428,823	+				+0.3
2,428,841	-				+0.8
2,428,882	-				-0.2
2,428,897	+				-0.2
2,428,903	+				-0.2
2,428,912	-				+0.1
2,428,920	-				+0.2
2,428,930	-				-0.4
2,428,930	-				-0.3
2,428,969	-				-0.0
2,428,969	-				-0.6
2,428,973	+				+1.7
2,428,974	-				-0.2
2,428,988	+				+0.1
2,429,060	+				+0.2
2,429,084	+				+0.1
2,429,096	+				-0.5
2,429,131	+				-0.5
2,429,138	-				-0.8
2,429,141	+				+0.5
2,429,141	+				-0.2
2,429,149	-				+0.2
2,429,149	-				+0.3
2,429,149	-				+0.4
2,429,149	-				-0.4
2,429,171	+				+1.0
2,429,171	+				-0.8
2,429,171	+				+0.1
2,429,171	+				-0.6
2,429,171	+				-0.2
2,429,171	+				-0.2
2,429,179	-				+0.8
2,429,179	-				+0.5
2,429,179	-				-1.5
2,429,179	-				+0.3
2,429,189	+				+1.2
2,429,189	+				+0.0
2,429,189	+				+0.4
2,429,197	-				-0.3
2,429,215	+				+0.2
2,429,221	+				-0.5
2,429,221	+				-0.7
2,429,221	+				+0.2
2,429,221	+				+0.7
2,429,229	-				+0.8
2,429,231	+				-1.0
2,429,239	+				-0.7
2,429,239	-				+0.1
2,429,239	-				+1.2
2,429,260	+		Dshi_2298	0.10	-1.6
2,429,260	+		Dshi_2298	0.10	+0.1
2,429,260	+		Dshi_2298	0.10	+1.2
2,429,260	+		Dshi_2298	0.10	-0.2
2,429,260	+		Dshi_2298	0.10	+0.3
2,429,260	+		Dshi_2298	0.10	+0.3
2,429,265	+		Dshi_2298	0.11	-0.2
2,429,268	-		Dshi_2298	0.11	-1.2
2,429,305	+		Dshi_2298	0.14	+0.0
2,429,311	-		Dshi_2298	0.15	+0.4
2,429,313	-		Dshi_2298	0.15	+0.7
2,429,317	+		Dshi_2298	0.16	-0.2
2,429,325	-		Dshi_2298	0.16	-0.2
2,429,330	-		Dshi_2298	0.17	+1.8
2,429,362	+		Dshi_2298	0.20	+0.3
2,429,362	+		Dshi_2298	0.20	+0.1
2,429,362	+		Dshi_2298	0.20	+0.3
2,429,364	-		Dshi_2298	0.20	+0.1
2,429,370	-		Dshi_2298	0.20	+1.6
2,429,375	+		Dshi_2298	0.21	+0.1
2,429,375	+		Dshi_2298	0.21	-0.4
2,429,383	-		Dshi_2298	0.21	-1.3
2,429,397	-		Dshi_2298	0.23	+2.0
2,429,399	-		Dshi_2298	0.23	+1.3
2,429,407	-		Dshi_2298	0.24	-0.3
2,429,409	-		Dshi_2298	0.24	+0.4
2,429,415	+		Dshi_2298	0.24	+0.1
2,429,423	-		Dshi_2298	0.25	+1.0
2,429,441	-		Dshi_2298	0.27	-0.1
2,429,443	-		Dshi_2298	0.27	+1.0
2,429,470	+		Dshi_2298	0.29	-0.2
2,429,478	-		Dshi_2298	0.30	+0.1
2,429,529	+		Dshi_2298	0.34	-0.1
2,429,536	-		Dshi_2298	0.35	-0.2
2,429,543	+		Dshi_2298	0.36	-0.5
2,429,585	+		Dshi_2298	0.39	+1.1
2,429,699	-		Dshi_2298	0.50	+0.4
2,429,705	-		Dshi_2298	0.50	+0.6
2,429,722	-		Dshi_2298	0.52	+0.6
2,429,736	+		Dshi_2298	0.53	+0.1
2,429,751	-		Dshi_2298	0.54	-0.6
2,429,779	+		Dshi_2298	0.57	+0.2
2,429,790	+		Dshi_2298	0.58	+0.3
2,429,961	+		Dshi_2298	0.73	-0.4
2,430,041	+		Dshi_2298	0.80	+0.3
2,430,041	+		Dshi_2298	0.80	-0.9
2,430,041	+		Dshi_2298	0.80	+0.1
2,430,046	+		Dshi_2298	0.80	+0.4
2,430,046	+		Dshi_2298	0.80	-0.3
2,430,059	-		Dshi_2298	0.82	-0.5
2,430,121	-		Dshi_2298	0.87	+1.3
2,430,163	-				+0.8
2,430,237	+				-0.2
2,430,237	+				+0.5
2,430,245	-				-0.3
2,430,245	-				-0.2
2,430,288	-				-0.3
2,430,331	+				+0.3
2,430,379	-		Dshi_2299	0.10	+0.6
2,430,584	+		Dshi_2299	0.27	+0.2
2,430,618	-		Dshi_2299	0.30	+0.5
2,430,620	+		Dshi_2299	0.30	-0.2
2,430,623	-		Dshi_2299	0.31	+0.6
2,430,632	-		Dshi_2299	0.31	-0.5
2,430,705	+		Dshi_2299	0.38	+0.1
2,430,733	+		Dshi_2299	0.40	+0.5
2,430,741	-		Dshi_2299	0.41	+0.2
2,430,752	+		Dshi_2299	0.42	-0.4
2,430,752	+		Dshi_2299	0.42	-0.2
2,430,760	-		Dshi_2299	0.42	+0.8
2,430,760	-		Dshi_2299	0.42	+0.7
2,430,765	-		Dshi_2299	0.43	+0.4
2,430,824	-		Dshi_2299	0.48	-0.2
2,430,824	-		Dshi_2299	0.48	+0.4
2,430,861	+		Dshi_2299	0.51	-1.3
2,431,088	+		Dshi_2299	0.70	-0.2
2,431,120	-		Dshi_2299	0.73	-0.5
2,431,170	-		Dshi_2299	0.77	-1.2
2,431,192	-		Dshi_2299	0.79	+0.4
2,431,222	-		Dshi_2299	0.82	+0.2
2,431,247	+		Dshi_2299	0.84	-0.7
2,431,258	+		Dshi_2299	0.85	+1.4