Experiment: m.b. Cobalt chloride 0.1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_1621 and Dshi_1622 are separated by 92 nucleotides Dshi_1622 and Dshi_R0029 are separated by 280 nucleotides Dshi_R0029 and Dshi_1623 are separated by 159 nucleotides
Dshi_1621: Dshi_1621 - PfkB domain protein (RefSeq), at 1,685,849 to 1,686,799
_1621
Dshi_1622: Dshi_1622 - hypothetical protein (RefSeq), at 1,686,892 to 1,688,406
_1622
Dshi_R0029: Dshi_R0029 - tRNA-Arg (RefSeq), at 1,688,687 to 1,688,763
_R0029
Dshi_1623: Dshi_1623 - cysteine desulfurase, SufS subfamily (RefSeq), at 1,688,923 to 1,690,143
_1623
Position (kb)
1686
1687
1688
1689 Strain fitness (log2 ratio)
-1
0
1 at 1685.984 kb on - strand, within Dshi_1621 at 1686.060 kb on - strand, within Dshi_1621 at 1686.069 kb on + strand, within Dshi_1621 at 1686.077 kb on - strand, within Dshi_1621 at 1686.077 kb on - strand, within Dshi_1621 at 1686.162 kb on + strand, within Dshi_1621 at 1686.222 kb on + strand, within Dshi_1621 at 1686.278 kb on - strand, within Dshi_1621 at 1686.306 kb on - strand, within Dshi_1621 at 1686.369 kb on - strand, within Dshi_1621 at 1686.408 kb on + strand, within Dshi_1621 at 1686.485 kb on + strand, within Dshi_1621 at 1686.587 kb on - strand, within Dshi_1621 at 1686.609 kb on - strand, within Dshi_1621 at 1686.609 kb on - strand, within Dshi_1621 at 1686.609 kb on - strand, within Dshi_1621 at 1686.653 kb on + strand, within Dshi_1621 at 1686.686 kb on - strand, within Dshi_1621 at 1686.703 kb on + strand, within Dshi_1621 at 1686.745 kb on - strand at 1686.758 kb on + strand at 1686.819 kb on - strand at 1686.824 kb on - strand at 1686.824 kb on - strand at 1686.909 kb on - strand at 1687.100 kb on - strand, within Dshi_1622 at 1687.142 kb on - strand, within Dshi_1622 at 1687.158 kb on + strand, within Dshi_1622 at 1687.317 kb on + strand, within Dshi_1622 at 1687.379 kb on + strand, within Dshi_1622 at 1687.569 kb on + strand, within Dshi_1622 at 1687.710 kb on + strand, within Dshi_1622 at 1687.906 kb on + strand, within Dshi_1622 at 1688.042 kb on - strand, within Dshi_1622 at 1688.043 kb on - strand, within Dshi_1622 at 1688.048 kb on - strand, within Dshi_1622 at 1688.093 kb on + strand, within Dshi_1622 at 1688.093 kb on + strand, within Dshi_1622 at 1688.189 kb on - strand, within Dshi_1622 at 1688.343 kb on - strand at 1688.449 kb on - strand at 1688.471 kb on - strand at 1688.481 kb on + strand at 1688.499 kb on - strand at 1688.530 kb on + strand at 1688.620 kb on - strand at 1688.659 kb on - strand at 1688.815 kb on + strand at 1688.823 kb on - strand at 1688.923 kb on - strand at 1688.923 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.1 mM remove 1,685,984 - Dshi_1621 0.14 -1.2 1,686,060 - Dshi_1621 0.22 +0.4 1,686,069 + Dshi_1621 0.23 -0.1 1,686,077 - Dshi_1621 0.24 +0.2 1,686,077 - Dshi_1621 0.24 -0.2 1,686,162 + Dshi_1621 0.33 -0.4 1,686,222 + Dshi_1621 0.39 -0.2 1,686,278 - Dshi_1621 0.45 -0.6 1,686,306 - Dshi_1621 0.48 -0.3 1,686,369 - Dshi_1621 0.55 -0.6 1,686,408 + Dshi_1621 0.59 +0.4 1,686,485 + Dshi_1621 0.67 +1.5 1,686,587 - Dshi_1621 0.78 -0.0 1,686,609 - Dshi_1621 0.80 -1.2 1,686,609 - Dshi_1621 0.80 +0.4 1,686,609 - Dshi_1621 0.80 +0.2 1,686,653 + Dshi_1621 0.85 -0.2 1,686,686 - Dshi_1621 0.88 -0.2 1,686,703 + Dshi_1621 0.90 +0.6 1,686,745 - -0.7 1,686,758 + -0.4 1,686,819 - -0.3 1,686,824 - -0.9 1,686,824 - -0.0 1,686,909 - -0.8 1,687,100 - Dshi_1622 0.14 -0.2 1,687,142 - Dshi_1622 0.17 +0.1 1,687,158 + Dshi_1622 0.18 -0.8 1,687,317 + Dshi_1622 0.28 +0.2 1,687,379 + Dshi_1622 0.32 -0.7 1,687,569 + Dshi_1622 0.45 +0.2 1,687,710 + Dshi_1622 0.54 +0.6 1,687,906 + Dshi_1622 0.67 -0.6 1,688,042 - Dshi_1622 0.76 -0.2 1,688,043 - Dshi_1622 0.76 +0.4 1,688,048 - Dshi_1622 0.76 -1.4 1,688,093 + Dshi_1622 0.79 +0.8 1,688,093 + Dshi_1622 0.79 -1.5 1,688,189 - Dshi_1622 0.86 -0.1 1,688,343 - -1.0 1,688,449 - +0.3 1,688,471 - -0.1 1,688,481 + +0.3 1,688,499 - +0.2 1,688,530 + -0.2 1,688,620 - +0.2 1,688,659 - +1.4 1,688,815 + -0.7 1,688,823 - -1.2 1,688,923 - -0.4 1,688,923 - -1.2
Or see this region's nucleotide sequence