Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT4477

Experiment: BHIS with Cephalothin 0.625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS with Cephalothin 0.625 mg/ml
5,889,667	+		BT4476	0.33	+1.3
5,889,668	-		BT4476	0.33	+1.5
5,889,693	-		BT4476	0.35	+0.7
5,889,722	+		BT4476	0.37	-0.5
5,889,723	-		BT4476	0.37	+1.3
5,889,807	-		BT4476	0.43	-2.5
5,889,930	-		BT4476	0.52	+0.6
5,889,955	-		BT4476	0.53	-0.9
5,889,955	-		BT4476	0.53	-1.1
5,889,989	+		BT4476	0.56	-1.4
5,889,990	-		BT4476	0.56	-1.5
5,889,990	-		BT4476	0.56	-0.6
5,889,990	-		BT4476	0.56	-1.5
5,889,990	-		BT4476	0.56	-0.3
5,890,141	+		BT4476	0.67	+0.1
5,890,201	+		BT4476	0.71	-0.4
5,890,203	+		BT4476	0.71	-1.7
5,890,204	-		BT4476	0.71	-1.6
5,890,204	-		BT4476	0.71	+1.4
5,890,246	+		BT4476	0.74	-0.4
5,890,250	+		BT4476	0.75	-0.7
5,890,265	-		BT4476	0.76	+0.6
5,890,466	+				+0.1
5,890,467	-				-0.9
5,890,470	-				-0.6
5,890,489	+				-0.1
5,890,489	+				-1.7
5,890,561	-				-0.4
5,890,561	-				+2.7
5,890,572	-				+0.9
5,890,572	-				+0.1
5,890,572	-				-2.0
5,890,600	+				-1.1
5,890,600	+				-2.8
5,890,631	+				+0.1
5,890,633	+				-3.7
5,890,634	-				+1.6
5,890,634	-				+1.3
5,890,823	+		BT4477	0.29	+1.1
5,890,893	+		BT4477	0.40	-1.7
5,890,893	+		BT4477	0.40	-4.1
5,890,941	+		BT4477	0.47	-1.7
5,891,014	+		BT4477	0.58	-2.2
5,891,014	+		BT4477	0.58	+1.1
5,891,098	-		BT4477	0.71	+0.5
5,891,250	-				-0.5
5,891,676	-		BT4478	0.71	-0.5
5,891,679	+		BT4478	0.72	-1.8
5,891,682	-		BT4478	0.73	+0.5
5,891,739	-				-0.5
5,891,739	-				-0.5
5,891,847	-				+0.8
5,891,992	+				+1.1
5,892,004	-				-2.6
5,892,118	-				-0.1
5,892,259	+				+0.8