Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT4159

Experiment: BHIS with Cephalothin 0.625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS with Cephalothin 0.625 mg/ml
5,463,672	+				-1.6
5,463,690	+				-0.2
5,463,771	+		BT4158	0.11	-0.8
5,463,815	+		BT4158	0.17	+1.0
5,463,869	-		BT4158	0.25	+0.5
5,463,925	-		BT4158	0.33	-0.7
5,463,929	+		BT4158	0.33	-2.6
5,463,965	-		BT4158	0.39	+0.4
5,464,024	-		BT4158	0.47	-0.9
5,464,057	-		BT4158	0.52	-0.9
5,464,057	-		BT4158	0.52	-1.7
5,464,057	-		BT4158	0.52	+0.1
5,464,062	+		BT4158	0.53	-0.1
5,464,185	-		BT4158	0.70	-0.9
5,464,217	-		BT4158	0.75	-1.7
5,464,221	+		BT4158	0.76	-1.4
5,464,258	+		BT4158	0.81	-2.2
5,464,259	-		BT4158	0.81	+0.2
5,464,272	+		BT4158	0.83	-1.4
5,464,273	-		BT4158	0.83	+1.3
5,464,318	-		BT4158	0.90	+1.1
5,464,335	+				+0.8
5,464,387	+				-1.0
5,464,413	-				+0.1
5,464,413	-				-0.2
5,464,454	-				-0.0
5,464,474	-				-0.3
5,464,515	+				-0.3
5,464,516	-				+1.1
5,464,549	-				-0.6
5,464,549	-				-2.2
5,464,582	-				+1.1
5,464,582	-				-1.1
5,464,585	-				-0.2
5,464,673	+				+0.6
5,464,759	-				-2.4
5,464,835	-		BT4159	0.11	-3.0
5,464,849	-		BT4159	0.12	-0.5
5,464,860	+		BT4159	0.12	+0.5
5,464,861	-		BT4159	0.12	-1.9
5,464,910	-		BT4159	0.15	-1.9
5,464,986	+		BT4159	0.20	+0.8
5,465,025	+		BT4159	0.22	+0.1
5,465,029	-		BT4159	0.23	+0.1
5,465,029	-		BT4159	0.23	+0.1
5,465,081	-		BT4159	0.26	-0.3
5,465,081	-		BT4159	0.26	+1.1
5,465,122	-		BT4159	0.28	-0.5
5,465,122	-		BT4159	0.28	+1.1
5,465,227	+		BT4159	0.35	-2.1
5,465,228	-		BT4159	0.35	-0.9
5,465,232	-		BT4159	0.35	-1.7
5,465,232	-		BT4159	0.35	-2.0
5,465,232	-		BT4159	0.35	-0.6
5,465,232	-		BT4159	0.35	+0.1
5,465,361	+		BT4159	0.43	-1.1
5,465,369	-		BT4159	0.43	+1.1
5,465,401	-		BT4159	0.45	-1.4
5,465,410	+		BT4159	0.46	-2.2
5,465,462	-		BT4159	0.49	-1.0
5,465,546	-		BT4159	0.54	-1.7
5,465,632	-		BT4159	0.60	-1.2
5,465,638	-		BT4159	0.60	-2.2
5,465,657	+		BT4159	0.61	-1.2
5,465,657	+		BT4159	0.61	-0.7
5,465,679	+		BT4159	0.62	+0.2
5,465,721	-		BT4159	0.65	-1.0
5,465,814	+		BT4159	0.71	-2.1
5,466,093	-		BT4159	0.88	+0.1
5,466,093	-		BT4159	0.88	-0.6
5,466,098	-		BT4159	0.88	-2.0
5,466,098	-		BT4159	0.88	-0.1
5,466,141	-				-1.8
5,466,215	-				+1.1
5,466,282	-				-2.8
5,466,469	+				-2.0
5,466,571	+		BT4160	0.12	-0.9
5,466,571	+		BT4160	0.12	-3.4
5,466,572	-		BT4160	0.12	-0.8
5,466,575	+		BT4160	0.12	+0.6
5,466,575	+		BT4160	0.12	+0.1
5,466,578	-		BT4160	0.12	-0.7
5,466,635	-		BT4160	0.15	-1.1
5,466,744	+		BT4160	0.20	+0.1
5,466,770	-		BT4160	0.21	+1.1
5,466,770	-		BT4160	0.21	-0.0
5,466,773	+		BT4160	0.22	+0.6
5,466,773	+		BT4160	0.22	+0.3
5,466,775	+		BT4160	0.22	-1.4
5,466,780	+		BT4160	0.22	-1.8
5,466,780	+		BT4160	0.22	-0.2
5,466,824	+		BT4160	0.24	-2.5
5,466,832	+		BT4160	0.24	-1.2
5,466,833	-		BT4160	0.24	+0.5
5,467,097	+		BT4160	0.37	-1.4
5,467,109	+		BT4160	0.38	-4.1
5,467,115	-		BT4160	0.38	-0.9
5,467,130	-		BT4160	0.39	+0.1
5,467,130	-		BT4160	0.39	-1.7
5,467,130	-				+1.1
5,467,136	-		BT4160	0.39	-1.4
5,467,162	+		BT4160	0.40	+2.0
5,467,212	-		BT4160	0.43	+0.1
5,467,212	-		BT4160	0.43	-0.5