Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT3224

Experiment: BHIS with Cephalothin 0.625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS with Cephalothin 0.625 mg/ml
4,114,826	+		BT3222	0.84	-2.7
4,114,915	+				-1.9
4,114,974	+				+1.2
4,114,998	+				+0.4
4,114,998	+				-0.0
4,114,999	-				-2.1
4,115,040	-				-1.5
4,115,084	-				+1.0
4,115,087	-				-0.6
4,115,208	+		BT3223	0.25	-1.6
4,115,211	-		BT3223	0.25	-0.7
4,115,220	+		BT3223	0.27	-0.1
4,115,221	-		BT3223	0.27	+0.6
4,115,232	+		BT3223	0.29	-0.6
4,115,247	+		BT3223	0.31	-1.4
4,115,340	+		BT3223	0.47	-1.4
4,115,340	+		BT3223	0.47	+0.7
4,115,341	-		BT3223	0.48	-0.8
4,115,341	-		BT3223	0.48	-1.4
4,115,359	-		BT3223	0.51	-1.6
4,115,460	-		BT3223	0.68	+1.4
4,115,490	-		BT3223	0.73	+0.4
4,115,496	-		BT3223	0.74	-0.6
4,115,536	+		BT3223	0.81	-1.6
4,115,542	+		BT3223	0.82	+0.2
4,115,548	-		BT3223	0.83	-0.0
4,115,643	+				+0.4
4,115,668	+				-1.9
4,115,668	+				-1.2
4,115,669	-				+0.2
4,115,683	+				+1.3
4,115,683	+				-2.5
4,115,746	+				-2.0
4,115,771	+				-0.9
4,115,771	+				-2.4
4,115,836	+				-2.6
4,115,851	+				-0.9
4,115,875	+				+0.2
4,115,933	+		BT3224	0.18	-2.4
4,115,933	+		BT3224	0.18	-0.7
4,116,238	+		BT3224	0.70	-3.9
4,116,238	+		BT3224	0.70	-4.1
4,116,283	+		BT3224	0.78	-1.3
4,116,317	+		BT3224	0.84	-2.1
4,116,317	+		BT3224	0.84	-0.1
4,116,319	+		BT3224	0.84	-1.7