Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT1984

Experiment: BHIS with Cephalothin 0.625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS with Cephalothin 0.625 mg/ml
2,492,604	+		BT1982	0.18	+1.1
2,492,607	+		BT1982	0.18	+0.3
2,492,724	+		BT1982	0.54	-0.9
2,492,726	+		BT1982	0.55	-0.8
2,492,727	-		BT1982	0.55	-1.7
2,492,937	+				-0.7
2,492,937	+				-1.6
2,492,938	-				-1.7
2,492,979	+		BT1983	0.15	-1.7
2,492,982	-		BT1983	0.15	-1.3
2,493,062	+		BT1983	0.27	-1.1
2,493,094	+		BT1983	0.31	+1.1
2,493,113	-		BT1983	0.34	+0.2
2,493,171	+		BT1983	0.42	-0.9
2,493,176	-		BT1983	0.43	+1.1
2,493,176	-		BT1983	0.43	+0.5
2,493,196	+		BT1983	0.46	+2.1
2,493,340	+		BT1983	0.67	-1.9
2,493,343	-		BT1983	0.67	-2.3
2,493,344	+		BT1983	0.68	+0.9
2,493,348	+		BT1983	0.68	+0.1
2,493,349	-		BT1983	0.68	-0.9
2,493,349	-		BT1983	0.68	-1.0
2,493,451	+		BT1983	0.83	-0.7
2,493,454	-		BT1983	0.83	+2.6
2,493,473	-		BT1983	0.86	+0.2
2,493,490	+		BT1983	0.89	+0.1
2,493,490	+		BT1983	0.89	-3.0
2,493,492	+		BT1983	0.89	-2.4
2,493,492	+		BT1983	0.89	+1.1
2,493,492	+		BT1983	0.89	-0.4
2,493,493	-		BT1983	0.89	+0.6
2,493,493	-		BT1983	0.89	+0.5
2,493,493	-		BT1983	0.89	-1.5
2,493,493	-		BT1983	0.89	+0.2
2,493,493	-				+1.1
2,493,534	-				-0.5
2,493,541	-				-0.3
2,493,560	+				+0.3
2,493,560	+				+0.1
2,493,657	-		BT1984	0.25	-2.1
2,493,665	-		BT1984	0.29	-1.3
2,493,684	+		BT1984	0.37	-2.6
2,493,694	-		BT1984	0.42	-1.8
2,493,794	-		BT1984	0.87	-2.8
2,493,826	+				-0.8
2,493,827	-				-3.5
2,493,827	-				-2.9
2,493,837	+				-1.3
2,493,855	-				-0.0
2,493,875	+		BT1985	0.14	-2.3
2,493,876	-		BT1985	0.14	+1.3
2,493,876	-		BT1985	0.14	+2.5
2,493,876	-		BT1985	0.14	+0.1
2,493,901	+		BT1985	0.19	-1.1
2,493,901	+		BT1985	0.19	-0.2
2,493,902	-		BT1985	0.20	-0.6
2,493,941	+		BT1985	0.28	-0.5
2,493,967	-		BT1985	0.34	-0.1
2,493,988	+		BT1985	0.38	-0.1
2,494,008	-		BT1985	0.43	+0.5
2,494,019	+		BT1985	0.45	+0.6
2,494,019	+		BT1985	0.45	+0.1
2,494,019	+		BT1985	0.45	-0.2
2,494,019	+		BT1985	0.45	-1.3
2,494,082	+		BT1985	0.59	+0.4
2,494,093	-		BT1985	0.61	-1.2
2,494,116	-		BT1985	0.66	-1.8
2,494,116	-		BT1985	0.66	-0.7
2,494,116	-		BT1985	0.66	-0.5
2,494,118	-		BT1985	0.67	-0.8
2,494,119	+		BT1985	0.67	-0.5
2,494,120	-		BT1985	0.67	-0.9
2,494,179	-		BT1985	0.80	-0.5
2,494,182	-		BT1985	0.81	-2.5
2,494,238	-				-0.3
2,494,259	-				-0.0
2,494,363	+				-0.3
2,494,660	+		BT1986	0.27	+0.5
2,494,660	+		BT1986	0.27	-1.3
2,494,708	+		BT1986	0.34	+1.0
2,494,709	-		BT1986	0.34	-0.4
2,494,709	-		BT1986	0.34	-0.1
2,494,781	-		BT1986	0.44	-0.3