Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT1008

Experiment: BHIS with Cephalothin 0.625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS with Cephalothin 0.625 mg/ml
1,254,060	+				-2.2
1,254,078	-				+1.2
1,254,092	+				-1.5
1,254,152	+				-1.0
1,254,191	-				+0.4
1,254,228	+				+0.6
1,254,248	+				+0.4
1,254,257	+				-0.3
1,254,302	-		BT1007	0.14	+0.1
1,254,306	+		BT1007	0.15	-1.4
1,254,307	-		BT1007	0.15	-2.1
1,254,310	-		BT1007	0.15	-0.6
1,254,332	+		BT1007	0.18	-1.3
1,254,345	-		BT1007	0.20	+2.0
1,254,368	+		BT1007	0.23	-3.5
1,254,369	-		BT1007	0.23	-0.5
1,254,420	-		BT1007	0.29	-0.6
1,254,424	+		BT1007	0.30	-0.8
1,254,427	-		BT1007	0.30	-2.1
1,254,516	+		BT1007	0.41	+0.7
1,254,517	-		BT1007	0.41	+0.4
1,254,525	-		BT1007	0.42	-0.7
1,254,607	+		BT1007	0.53	+1.5
1,254,609	+		BT1007	0.53	-1.8
1,254,630	-		BT1007	0.56	-0.8
1,254,630	-		BT1007	0.56	+0.1
1,254,634	-		BT1007	0.56	-0.5
1,254,778	-		BT1007	0.74	+0.1
1,254,780	-		BT1007	0.75	-1.3
1,254,803	+		BT1007	0.78	-2.4
1,254,919	-				-2.4
1,254,956	+				+1.3
1,254,956	+				-2.1
1,255,013	+				+0.7
1,255,013	+				-0.2
1,255,022	+				-3.1
1,255,097	-				-1.3
1,255,164	-		BT1008	0.15	-2.1
1,255,193	+		BT1008	0.19	-0.4
1,255,194	-		BT1008	0.19	-1.4
1,255,237	-		BT1008	0.24	-0.2
1,255,268	+		BT1008	0.28	-0.5
1,255,285	+		BT1008	0.30	-0.6
1,255,309	+		BT1008	0.33	-1.8
1,255,585	+		BT1008	0.68	-2.4
1,255,586	-		BT1008	0.68	-1.6
1,255,586	-		BT1008	0.68	-3.4
1,255,589	+		BT1008	0.69	-0.9
1,255,590	-		BT1008	0.69	-1.3
1,255,674	-		BT1008	0.79	-2.4
1,255,783	+				-0.3
1,255,784	-				-2.7
1,255,807	+				-0.5
1,255,815	-				+0.1
1,255,818	-				+0.5
1,255,895	-				+0.2
1,256,016	+		BT1009	0.19	+0.0
1,256,016	+		BT1009	0.19	-0.1
1,256,333	+		BT1009	0.52	+2.1
1,256,334	-		BT1009	0.53	-0.8
1,256,468	+		BT1009	0.67	-2.4
1,256,562	+		BT1009	0.77	-2.7
1,256,754	+				+1.3
1,256,787	-				-0.3