Experiment: BHIS with Cephalothin 0.625 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BT0743 and BT0744 overlap by 131 nucleotides BT0744 and BT0745 overlap by 4 nucleotides BT0745 and BT0746 are separated by 3 nucleotides
BT0743: BT0743 - penicillin-binding protein 1A (PBP-1a) (NCBI ptt file), at 920,582 to 922,921
BT0743
BT0744: BT0744 - 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (NCBI ptt file), at 922,791 to 923,312
BT0744
BT0745: BT0745 - 3-deoxy-manno-octulosonate cytidylyltransferase (NCBI ptt file), at 923,309 to 924,061
BT0745
BT0746: BT0746 - putative zinc protease (NCBI ptt file), at 924,065 to 925,348
BT0746
Position (kb) 923
924
925 Strain fitness (log2 ratio) -2
-1
0
1 at 924.078 kb on + strand at 924.090 kb on + strand at 924.200 kb on - strand, within BT0746 at 924.320 kb on + strand, within BT0746 at 924.367 kb on + strand, within BT0746 at 924.463 kb on + strand, within BT0746 at 924.508 kb on + strand, within BT0746 at 924.645 kb on - strand, within BT0746 at 924.847 kb on + strand, within BT0746 at 924.847 kb on + strand, within BT0746 at 924.886 kb on - strand, within BT0746 at 924.937 kb on + strand, within BT0746 at 924.961 kb on + strand, within BT0746
Per-strain Table
Position Strand Gene LocusTag Fraction BHIS with Cephalothin 0.625 mg/ml remove 924,078 + +0.5 924,090 + -2.1 924,200 - BT0746 0.11 +0.0 924,320 + BT0746 0.20 -0.3 924,367 + BT0746 0.24 -2.3 924,463 + BT0746 0.31 -1.6 924,508 + BT0746 0.35 -0.8 924,645 - BT0746 0.45 -0.8 924,847 + BT0746 0.61 -1.3 924,847 + BT0746 0.61 +0.7 924,886 - BT0746 0.64 -0.1 924,937 + BT0746 0.68 -0.3 924,961 + BT0746 0.70 -1.8
Or see this region's nucleotide sequence