Experiment: MoLS4 with L-Serine (N), without W
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt recR and DVU3201 are separated by 402 nucleotides DVU3201 and DVU3202 are separated by 237 nucleotides
DVU3200: recR - recombination protein RecR (TIGR), at 3,362,805 to 3,363,410
recR
DVU3201: DVU3201 - hypothetical protein (TIGR), at 3,363,813 to 3,364,874
DVU3201
DVU3202: DVU3202 - hydrolase, TatD family (TIGR), at 3,365,112 to 3,365,948
DVU3202
Position (kb)
3363
3364
3365 Strain fitness (log2 ratio)
-1
0
1 at 3362.831 kb on - strand at 3362.875 kb on + strand, within recR at 3362.947 kb on + strand, within recR at 3362.955 kb on - strand, within recR at 3362.965 kb on + strand, within recR at 3362.973 kb on - strand, within recR at 3362.981 kb on + strand, within recR at 3363.107 kb on - strand, within recR at 3363.111 kb on + strand, within recR at 3363.228 kb on - strand, within recR at 3363.236 kb on + strand, within recR at 3363.329 kb on + strand, within recR at 3363.355 kb on + strand at 3363.365 kb on + strand at 3363.390 kb on - strand at 3363.395 kb on - strand at 3363.424 kb on + strand at 3363.437 kb on - strand at 3363.747 kb on - strand at 3363.882 kb on + strand at 3363.883 kb on + strand at 3363.883 kb on + strand at 3363.931 kb on + strand, within DVU3201 at 3363.931 kb on + strand, within DVU3201 at 3364.038 kb on - strand, within DVU3201 at 3364.091 kb on + strand, within DVU3201 at 3364.242 kb on + strand, within DVU3201 at 3364.242 kb on + strand, within DVU3201 at 3364.242 kb on + strand, within DVU3201 at 3364.242 kb on + strand, within DVU3201 at 3364.243 kb on - strand, within DVU3201 at 3364.250 kb on - strand, within DVU3201 at 3364.250 kb on - strand, within DVU3201 at 3364.346 kb on + strand, within DVU3201 at 3364.383 kb on - strand, within DVU3201 at 3364.443 kb on - strand, within DVU3201 at 3364.466 kb on + strand, within DVU3201 at 3364.478 kb on + strand, within DVU3201 at 3364.508 kb on - strand, within DVU3201 at 3364.543 kb on - strand, within DVU3201 at 3364.609 kb on + strand, within DVU3201 at 3364.621 kb on + strand, within DVU3201 at 3364.677 kb on + strand, within DVU3201 at 3364.708 kb on + strand, within DVU3201 at 3364.729 kb on + strand, within DVU3201 at 3364.759 kb on + strand, within DVU3201 at 3364.762 kb on - strand, within DVU3201 at 3364.790 kb on - strand at 3364.875 kb on + strand at 3364.877 kb on - strand at 3364.886 kb on + strand at 3364.888 kb on - strand at 3364.888 kb on - strand at 3364.996 kb on + strand at 3365.125 kb on + strand at 3365.170 kb on + strand at 3365.204 kb on - strand, within DVU3202 at 3365.302 kb on + strand, within DVU3202 at 3365.354 kb on + strand, within DVU3202 at 3365.406 kb on + strand, within DVU3202 at 3365.414 kb on - strand, within DVU3202 at 3365.541 kb on + strand, within DVU3202 at 3365.549 kb on - strand, within DVU3202 at 3365.585 kb on + strand, within DVU3202 at 3365.586 kb on - strand, within DVU3202 at 3365.702 kb on + strand, within DVU3202 at 3365.705 kb on - strand, within DVU3202 at 3365.726 kb on + strand, within DVU3202 at 3365.734 kb on - strand, within DVU3202 at 3365.734 kb on - strand, within DVU3202 at 3365.779 kb on + strand, within DVU3202 at 3365.867 kb on + strand at 3365.868 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with L-Serine (N), without W remove 3,362,831 - +0.1 3,362,875 + recR DVU3200 0.12 -0.4 3,362,947 + recR DVU3200 0.23 +0.7 3,362,955 - recR DVU3200 0.25 -0.0 3,362,965 + recR DVU3200 0.26 +0.3 3,362,973 - recR DVU3200 0.28 -0.5 3,362,981 + recR DVU3200 0.29 -1.3 3,363,107 - recR DVU3200 0.50 -0.2 3,363,111 + recR DVU3200 0.50 -0.8 3,363,228 - recR DVU3200 0.70 -0.8 3,363,236 + recR DVU3200 0.71 -0.1 3,363,329 + recR DVU3200 0.86 -0.7 3,363,355 + -0.2 3,363,365 + -0.4 3,363,390 - -0.4 3,363,395 - +0.1 3,363,424 + -1.1 3,363,437 - -0.3 3,363,747 - +0.3 3,363,882 + -0.1 3,363,883 + -0.0 3,363,883 + -0.1 3,363,931 + DVU3201 0.11 +0.8 3,363,931 + DVU3201 0.11 -0.5 3,364,038 - DVU3201 0.21 -0.5 3,364,091 + DVU3201 0.26 +0.4 3,364,242 + DVU3201 0.40 -0.1 3,364,242 + DVU3201 0.40 -0.7 3,364,242 + DVU3201 0.40 -0.0 3,364,242 + DVU3201 0.40 +0.7 3,364,243 - DVU3201 0.40 -0.2 3,364,250 - DVU3201 0.41 +0.4 3,364,250 - DVU3201 0.41 +0.4 3,364,346 + DVU3201 0.50 -0.1 3,364,383 - DVU3201 0.54 +0.5 3,364,443 - DVU3201 0.59 +0.2 3,364,466 + DVU3201 0.61 -0.2 3,364,478 + DVU3201 0.63 +0.1 3,364,508 - DVU3201 0.65 -0.0 3,364,543 - DVU3201 0.69 +0.9 3,364,609 + DVU3201 0.75 +0.2 3,364,621 + DVU3201 0.76 +0.4 3,364,677 + DVU3201 0.81 -0.5 3,364,708 + DVU3201 0.84 +0.5 3,364,729 + DVU3201 0.86 +0.2 3,364,759 + DVU3201 0.89 +0.4 3,364,762 - DVU3201 0.89 +1.7 3,364,790 - +0.1 3,364,875 + +0.5 3,364,877 - +0.1 3,364,886 + -0.7 3,364,888 - -0.4 3,364,888 - -0.1 3,364,996 + +0.2 3,365,125 + -0.1 3,365,170 + +0.2 3,365,204 - DVU3202 0.11 -0.5 3,365,302 + DVU3202 0.23 -0.4 3,365,354 + DVU3202 0.29 -0.1 3,365,406 + DVU3202 0.35 -0.1 3,365,414 - DVU3202 0.36 -0.2 3,365,541 + DVU3202 0.51 -0.2 3,365,549 - DVU3202 0.52 +1.2 3,365,585 + DVU3202 0.57 +0.3 3,365,586 - DVU3202 0.57 -0.5 3,365,702 + DVU3202 0.70 -0.8 3,365,705 - DVU3202 0.71 -0.3 3,365,726 + DVU3202 0.73 -0.3 3,365,734 - DVU3202 0.74 -1.4 3,365,734 - DVU3202 0.74 -1.5 3,365,779 + DVU3202 0.80 +0.1 3,365,867 + -0.1 3,365,868 + -0.2
Or see this region's nucleotide sequence