Experiment: MoLS4 with L-Serine (N), without W
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt rluC and DVU3192 overlap by 4 nucleotides DVU3192 and DVU3193 are separated by 249 nucleotides
DVU3191: rluC - ribosomal large subunit pseudouridine synthase C (TIGR), at 3,351,436 to 3,352,608
rluC
DVU3192: DVU3192 - glycosyl transferase, group 1 family protein (TIGR), at 3,352,605 to 3,353,765
DVU3192
DVU3193: DVU3193 - DNA-binding domain, excisionase family (TIGR), at 3,354,015 to 3,354,926
DVU3193
Position (kb)
3352
3353
3354 Strain fitness (log2 ratio)
-2
-1
0
1 at 3351.782 kb on + strand, within rluC at 3351.911 kb on + strand, within rluC at 3351.917 kb on + strand, within rluC at 3351.960 kb on - strand, within rluC at 3352.140 kb on + strand, within rluC at 3352.140 kb on + strand, within rluC at 3352.281 kb on + strand, within rluC at 3352.454 kb on + strand, within rluC at 3352.502 kb on + strand at 3352.530 kb on + strand at 3353.757 kb on + strand at 3353.776 kb on + strand at 3353.811 kb on + strand at 3353.824 kb on - strand at 3353.827 kb on + strand at 3353.887 kb on - strand at 3353.935 kb on + strand at 3353.944 kb on - strand at 3353.958 kb on - strand at 3353.965 kb on - strand at 3354.057 kb on - strand at 3354.057 kb on - strand at 3354.067 kb on - strand at 3354.067 kb on - strand at 3354.082 kb on - strand at 3354.191 kb on - strand, within DVU3193 at 3354.240 kb on - strand, within DVU3193 at 3354.336 kb on - strand, within DVU3193 at 3354.355 kb on + strand, within DVU3193 at 3354.376 kb on - strand, within DVU3193 at 3354.524 kb on - strand, within DVU3193 at 3354.679 kb on + strand, within DVU3193 at 3354.684 kb on + strand, within DVU3193 at 3354.684 kb on + strand, within DVU3193 at 3354.687 kb on - strand, within DVU3193 at 3354.757 kb on - strand, within DVU3193 at 3354.757 kb on - strand, within DVU3193 at 3354.759 kb on + strand, within DVU3193
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with L-Serine (N), without W remove 3,351,782 + rluC DVU3191 0.29 -1.3 3,351,911 + rluC DVU3191 0.40 +0.1 3,351,917 + rluC DVU3191 0.41 -2.0 3,351,960 - rluC DVU3191 0.45 -1.1 3,352,140 + rluC DVU3191 0.60 -0.3 3,352,140 + rluC DVU3191 0.60 +0.1 3,352,281 + rluC DVU3191 0.72 -0.0 3,352,454 + rluC DVU3191 0.87 +0.1 3,352,502 + +0.6 3,352,530 + -0.5 3,353,757 + -1.5 3,353,776 + -0.1 3,353,811 + +0.0 3,353,824 - +0.3 3,353,827 + -0.2 3,353,887 - +0.2 3,353,935 + +1.7 3,353,944 - +0.4 3,353,958 - +0.2 3,353,965 - +0.1 3,354,057 - +0.1 3,354,057 - -0.3 3,354,067 - +0.7 3,354,067 - -0.7 3,354,082 - +1.7 3,354,191 - DVU3193 0.19 +0.5 3,354,240 - DVU3193 0.25 -0.8 3,354,336 - DVU3193 0.35 -0.3 3,354,355 + DVU3193 0.37 -0.4 3,354,376 - DVU3193 0.40 -0.4 3,354,524 - DVU3193 0.56 -0.3 3,354,679 + DVU3193 0.73 -1.0 3,354,684 + DVU3193 0.73 +1.3 3,354,684 + DVU3193 0.73 -0.6 3,354,687 - DVU3193 0.74 -0.1 3,354,757 - DVU3193 0.81 -0.7 3,354,757 - DVU3193 0.81 +0.7 3,354,759 + DVU3193 0.82 -0.0
Or see this region's nucleotide sequence