Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_4015

Experiment: Gentamicin 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gentamicin 0.005 mg/ml
4,128,870	+				-0.0
4,128,870	+				+0.7
4,128,880	+				-0.0
4,128,880	+				+0.4
4,128,881	-				-0.0
4,128,919	+		Ga0059261_4013	0.17	+0.3
4,128,920	-		Ga0059261_4013	0.17	+0.5
4,128,920	-		Ga0059261_4013	0.17	-0.3
4,129,243	+				+0.1
4,129,244	-				+0.5
4,129,664	-				+0.8
4,129,798	+				-0.4
4,129,799	-				-0.2
4,129,799	-				-0.6
4,129,812	-				+0.3
4,129,812	-				-0.7
4,129,827	+				+0.2
4,129,827	+				+0.3
4,129,827	+				-0.9
4,129,828	-				+0.6
4,129,828	-				-0.1
4,129,828	-				-0.6
4,130,196	+		Ga0059261_4015	0.68	-0.3
4,130,196	+		Ga0059261_4015	0.68	-0.3
4,130,196	+		Ga0059261_4015	0.68	+0.7
4,130,196	+		Ga0059261_4015	0.68	-0.6
4,130,196	+		Ga0059261_4015	0.68	+0.3
4,130,197	-		Ga0059261_4015	0.69	+0.9
4,130,197	-		Ga0059261_4015	0.69	+1.1
4,130,197	-		Ga0059261_4015	0.69	-0.3
4,130,197	-		Ga0059261_4015	0.69	+0.3
4,130,280	+		Ga0059261_4015	0.83	+0.4
4,130,280	+		Ga0059261_4015	0.83	+0.2
4,130,280	+		Ga0059261_4015	0.83	-0.3
4,130,280	+		Ga0059261_4015	0.83	+1.2
4,130,281	-		Ga0059261_4015	0.84	+1.2
4,130,281	-		Ga0059261_4015	0.84	-1.1
4,130,296	-		Ga0059261_4015	0.86	+0.4
4,130,370	+				-0.6
4,130,370	+				+0.1
4,130,370	+				-0.5
4,130,370	+				+0.5
4,130,370	+				-0.3
4,130,371	-				-0.9
4,130,371	-				+1.0
4,130,637	+		Ga0059261_4016	0.28	-0.1
4,130,637	+		Ga0059261_4016	0.28	+0.3
4,130,637	+		Ga0059261_4016	0.28	-0.7
4,130,637	+		Ga0059261_4016	0.28	-0.6
4,130,638	-		Ga0059261_4016	0.28	+0.1
4,130,638	-		Ga0059261_4016	0.28	-0.3
4,130,755	-		Ga0059261_4016	0.40	+1.2
4,130,755	-		Ga0059261_4016	0.40	-3.2
4,130,790	+		Ga0059261_4016	0.44	-0.2
4,130,791	-		Ga0059261_4016	0.44	-0.2
4,130,862	+		Ga0059261_4016	0.51	-1.0
4,130,862	+				+1.3
4,130,862	+		Ga0059261_4016	0.51	+0.4
4,130,862	+		Ga0059261_4016	0.51	-0.3
4,130,863	-		Ga0059261_4016	0.51	-2.1
4,130,863	-				+1.3
4,130,892	-		Ga0059261_4016	0.54	+0.2
4,130,940	+		Ga0059261_4016	0.59	+0.6
4,130,941	-		Ga0059261_4016	0.59	-0.9
4,131,139	+		Ga0059261_4016	0.80	+0.0
4,131,139	+		Ga0059261_4016	0.80	+1.0
4,131,139	+		Ga0059261_4016	0.80	+0.9
4,131,139	+		Ga0059261_4016	0.80	-2.1
4,131,139	+		Ga0059261_4016	0.80	+0.9
4,131,140	-		Ga0059261_4016	0.80	-0.1
4,131,140	-		Ga0059261_4016	0.80	+0.7
4,131,140	-		Ga0059261_4016	0.80	+0.5
4,131,140	-		Ga0059261_4016	0.80	+0.6
4,131,141	+		Ga0059261_4016	0.80	-0.9
4,131,141	+		Ga0059261_4016	0.80	+0.7
4,131,142	-		Ga0059261_4016	0.80	+0.2
4,131,186	+		Ga0059261_4016	0.85	-0.1
4,131,186	+		Ga0059261_4016	0.85	-0.2
4,131,187	-		Ga0059261_4016	0.85	-1.3
4,131,187	-		Ga0059261_4016	0.85	+0.3
4,131,228	+		Ga0059261_4016	0.89	+0.7
4,131,228	+		Ga0059261_4016	0.89	-0.1
4,131,228	+		Ga0059261_4016	0.89	-1.3
4,131,228	+		Ga0059261_4016	0.89	+0.3
4,131,228	+		Ga0059261_4016	0.89	+0.4
4,131,229	-		Ga0059261_4016	0.89	-0.3
4,131,345	+				+0.6
4,131,345	+				+0.4
4,131,345	+				-0.3
4,131,346	-				-1.9
4,131,346	-				+0.5
4,131,346	-				+1.0
4,131,354	+				+3.0
4,131,354	+				-0.2
4,131,355	-				+0.3
4,131,355	-				-0.4