Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_3833

Experiment: Gentamicin 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gentamicin 0.005 mg/ml
3,932,952	+		Ga0059261_3832	0.71	-1.8
3,932,952	+		Ga0059261_3832	0.71	+0.3
3,932,953	-		Ga0059261_3832	0.71	+0.3
3,932,974	+		Ga0059261_3832	0.72	-0.9
3,932,974	+				+0.8
3,932,975	-		Ga0059261_3832	0.72	-0.1
3,933,088	+		Ga0059261_3832	0.76	-0.2
3,933,088	+		Ga0059261_3832	0.76	-0.4
3,933,089	-		Ga0059261_3832	0.76	-0.5
3,933,099	+		Ga0059261_3832	0.76	-0.6
3,933,099	+		Ga0059261_3832	0.76	-0.4
3,933,099	+		Ga0059261_3832	0.76	+0.1
3,933,099	+		Ga0059261_3832	0.76	-0.0
3,933,099	+		Ga0059261_3832	0.76	-0.4
3,933,100	-		Ga0059261_3832	0.76	-0.4
3,933,100	-		Ga0059261_3832	0.76	+0.6
3,933,186	-		Ga0059261_3832	0.80	+0.8
3,933,625	+				+0.2
3,933,625	+				+0.1
3,933,625	+				+0.3
3,933,625	+				-0.3
3,933,626	-				+0.3
3,933,626	-				+0.5
3,933,626	-				-0.4
3,933,801	+				+0.5
3,933,801	+				-1.0
3,933,801	+				-0.7
3,933,801	+				-0.2
3,933,801	+				-0.1
3,933,802	-				+0.4
3,933,802	-				+0.7
3,933,802	-				+0.1
3,933,802	-				-0.4
3,933,802	-				-2.8
3,933,802	-				+0.2
3,933,822	+				+0.5
3,933,822	+				-0.3
3,933,822	+				-0.3
3,933,829	+				+1.3
3,933,829	+				-0.3
3,933,851	+				-0.8
3,933,852	-				-0.7
3,933,852	-				+0.4
3,933,938	+		Ga0059261_3833	0.27	+0.2
3,933,938	+		Ga0059261_3833	0.27	+1.1
3,933,938	+		Ga0059261_3833	0.27	+0.2
3,934,011	-		Ga0059261_3833	0.62	-0.3
3,934,011	-				+2.7
3,934,131	+				-0.6
3,934,131	+				-0.5
3,934,131	+				+0.6
3,934,131	+				+0.1
3,934,131	+				+1.3
3,934,131	+				-0.1
3,934,132	-				+0.5
3,934,132	-				-0.3
3,934,132	-				+0.0
3,934,132	-				+0.0
3,934,132	-				+1.1
3,934,132	-				+0.0
3,934,132	-				-0.7
3,934,132	-				+1.0
3,934,132	-				+0.6
3,934,247	+		Ga0059261_3834	0.27	-0.1
3,934,248	-		Ga0059261_3834	0.27	-1.3
3,934,248	-		Ga0059261_3834	0.27	-0.4
3,934,248	-		Ga0059261_3834	0.27	-1.7
3,934,248	-		Ga0059261_3834	0.27	-0.1
3,934,283	+		Ga0059261_3834	0.34	+0.0
3,934,283	+		Ga0059261_3834	0.34	+0.1
3,934,283	+		Ga0059261_3834	0.34	-0.1
3,934,284	-		Ga0059261_3834	0.34	-0.2
3,934,303	+		Ga0059261_3834	0.38	+0.1
3,934,304	-		Ga0059261_3834	0.39	-1.5
3,934,304	-		Ga0059261_3834	0.39	+0.3
3,934,304	-		Ga0059261_3834	0.39	+0.0
3,934,304	-		Ga0059261_3834	0.39	-0.3
3,934,444	+		Ga0059261_3834	0.68	-0.0
3,934,444	+		Ga0059261_3834	0.68	-0.8
3,934,445	-		Ga0059261_3834	0.68	+0.0
3,934,445	-		Ga0059261_3834	0.68	+0.3
3,934,445	-		Ga0059261_3834	0.68	-0.1
3,934,673	+				-0.1
3,934,673	+				+0.0
3,934,715	+				+0.7
3,934,716	-				-0.3
3,934,866	+		Ga0059261_3835	0.20	+0.5
3,934,866	+				-0.8
3,934,866	+		Ga0059261_3835	0.20	+0.1
3,934,866	+		Ga0059261_3835	0.20	-0.1
3,934,866	+		Ga0059261_3835	0.20	+0.0
3,934,867	-		Ga0059261_3835	0.20	+0.4
3,934,867	-		Ga0059261_3835	0.20	+0.2
3,934,867	-		Ga0059261_3835	0.20	-0.5
3,934,867	-		Ga0059261_3835	0.20	-0.2
3,934,968	+		Ga0059261_3835	0.32	-0.5
3,934,968	+		Ga0059261_3835	0.32	-0.7
3,934,969	-		Ga0059261_3835	0.32	-1.3
3,934,969	-		Ga0059261_3835	0.32	-0.0
3,934,969	-		Ga0059261_3835	0.32	+0.0