Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_3807

Experiment: Gentamicin 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gentamicin 0.005 mg/ml
3,909,341	+				+1.7
3,909,341	+				+0.3
3,909,341	+				+1.7
3,909,341	+				+1.7
3,909,341	+				-0.6
3,909,342	-				+0.1
3,909,342	-				+0.6
3,909,463	+		Ga0059261_3805	0.23	+0.4
3,909,463	+				+1.7
3,909,464	-		Ga0059261_3805	0.24	-0.2
3,909,464	-		Ga0059261_3805	0.24	-0.5
3,909,532	+		Ga0059261_3805	0.36	-0.3
3,909,532	+		Ga0059261_3805	0.36	+0.4
3,909,532	+		Ga0059261_3805	0.36	-1.3
3,909,532	+		Ga0059261_3805	0.36	-0.7
3,909,532	+		Ga0059261_3805	0.36	+0.5
3,909,532	+		Ga0059261_3805	0.36	+0.2
3,909,532	+		Ga0059261_3805	0.36	-0.5
3,909,533	-		Ga0059261_3805	0.36	-0.6
3,909,533	-		Ga0059261_3805	0.36	+0.3
3,909,533	-		Ga0059261_3805	0.36	-0.3
3,909,533	-		Ga0059261_3805	0.36	-0.6
3,909,533	-		Ga0059261_3805	0.36	+0.6
3,909,662	-		Ga0059261_3805	0.59	-0.4
3,909,662	-		Ga0059261_3805	0.59	+0.3
3,909,765	-		Ga0059261_3805	0.78	+0.5
3,909,775	+		Ga0059261_3805	0.80	+0.2
3,909,776	-		Ga0059261_3805	0.80	+0.4
3,909,776	-		Ga0059261_3805	0.80	-0.1
3,909,811	+		Ga0059261_3805	0.86	-0.5
3,909,895	+				-0.7
3,909,895	+				-1.6
3,910,220	+				+0.0
3,910,220	+				-0.2
3,910,221	-				-0.3
3,910,221	-				-0.6
3,910,221	-				-0.5
3,910,242	-				+0.3
3,910,245	+				+1.3
3,910,246	-				+0.3
3,910,246	-				+0.2
3,910,251	-				+0.2
3,910,252	+				+0.7
3,910,252	+				+0.6
3,910,252	+				+0.4
3,910,252	+				+0.6
3,910,253	-				+1.3
3,910,255	+				-0.1
3,910,255	+				-0.4
3,910,352	+				+0.7
3,910,352	+				+0.2
3,910,352	+				-0.0
3,910,353	-				-1.5
3,910,394	+		Ga0059261_3807	0.12	+1.6
3,910,394	+		Ga0059261_3807	0.12	-0.4
3,910,395	-		Ga0059261_3807	0.12	+0.6
3,910,395	-		Ga0059261_3807	0.12	+1.2
3,910,395	-				-1.3
3,910,453	-		Ga0059261_3807	0.23	-0.2
3,910,472	+		Ga0059261_3807	0.27	-0.4
3,910,472	+		Ga0059261_3807	0.27	-0.1
3,910,473	-		Ga0059261_3807	0.27	+0.2
3,910,568	+		Ga0059261_3807	0.45	+0.7
3,910,568	+		Ga0059261_3807	0.45	+1.1
3,910,568	+		Ga0059261_3807	0.45	+0.6
3,910,568	+		Ga0059261_3807	0.45	-1.6
3,910,568	+		Ga0059261_3807	0.45	-1.6
3,910,568	+		Ga0059261_3807	0.45	+0.7
3,910,569	-		Ga0059261_3807	0.45	+0.5
3,910,899	+				+0.0
3,910,899	+				+0.1
3,910,900	-				+0.8
3,910,900	-				+0.7
3,910,900	-				+0.2
3,910,962	+				-0.5
3,910,963	-				-0.3
3,910,963	-				+0.3
3,910,963	-				+0.3
3,910,963	-				-1.4
3,910,963	-				+0.3
3,910,963	-				-0.3
3,911,075	+				-0.3
3,911,076	-				-0.0
3,911,152	+				-0.1
3,911,153	-				-0.6
3,911,382	-		Ga0059261_3808	0.34	-0.3