Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_3251

Experiment: Gentamicin 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gentamicin 0.005 mg/ml
3,383,499	+		Ga0059261_3250	0.30	-0.1
3,383,499	+		Ga0059261_3250	0.30	-1.1
3,383,499	+		Ga0059261_3250	0.30	+0.1
3,383,499	+		Ga0059261_3250	0.30	-0.2
3,383,499	+		Ga0059261_3250	0.30	-0.0
3,383,499	+		Ga0059261_3250	0.30	-0.1
3,383,499	+		Ga0059261_3250	0.30	+0.6
3,383,499	+		Ga0059261_3250	0.30	+0.6
3,383,499	+		Ga0059261_3250	0.30	+0.1
3,383,499	+		Ga0059261_3250	0.30	+0.5
3,383,500	-		Ga0059261_3250	0.30	+0.4
3,383,500	-				+0.8
3,383,500	-				-0.2
3,383,685	-		Ga0059261_3250	0.52	+0.8
3,383,780	+		Ga0059261_3250	0.63	-0.1
3,383,781	-		Ga0059261_3250	0.63	+0.1
3,383,781	-		Ga0059261_3250	0.63	+0.4
3,383,781	-		Ga0059261_3250	0.63	+0.4
3,383,781	-		Ga0059261_3250	0.63	-0.1
3,383,885	+		Ga0059261_3250	0.75	+0.1
3,383,886	-		Ga0059261_3250	0.75	+0.4
3,383,961	+		Ga0059261_3250	0.84	-0.8
3,383,961	+		Ga0059261_3250	0.84	-0.3
3,383,962	-		Ga0059261_3250	0.84	+0.3
3,383,962	-		Ga0059261_3250	0.84	+0.1
3,383,963	+		Ga0059261_3250	0.84	+0.8
3,383,963	+		Ga0059261_3250	0.84	-0.1
3,383,964	-		Ga0059261_3250	0.84	+0.8
3,383,964	-		Ga0059261_3250	0.84	-1.6
3,383,964	-		Ga0059261_3250	0.84	+0.4
3,383,976	-		Ga0059261_3250	0.85	-0.6
3,383,976	-		Ga0059261_3250	0.85	-0.4
3,384,020	+				-0.4
3,384,020	+				+0.9
3,384,020	+				-0.4
3,384,021	-				-0.0
3,384,080	+				-0.4
3,384,080	+				-0.5
3,384,080	+				+0.8
3,384,080	+				+0.4
3,384,080	+				-0.5
3,384,080	+				-0.5
3,384,081	-				+0.6
3,384,081	-				+0.1
3,384,081	-				+0.7
3,384,081	-				+0.1
3,384,081	-				+0.0
3,384,126	-				-0.3
3,384,126	-				+1.3
3,384,155	-				-0.5
3,384,155	-				+0.4
3,384,238	+				-0.7
3,384,238	+				-0.3
3,384,238	+				-0.4
3,384,238	+				+0.1
3,384,238	+				-0.8
3,384,238	+				-0.4
3,384,238	+				+0.2
3,384,238	+				+0.9
3,384,239	-				-0.5
3,384,239	-				+0.5
3,384,239	-				+0.3
3,384,239	-				-0.4
3,384,239	-				+0.4
3,384,239	-				+0.5
3,384,239	-				-0.5
3,384,409	+		Ga0059261_3251	0.21	+0.2
3,384,879	-		Ga0059261_3251	0.71	-0.3
3,384,889	-		Ga0059261_3251	0.72	+1.0
3,385,031	+		Ga0059261_3251	0.88	+0.4
3,385,032	-		Ga0059261_3251	0.88	+1.0
3,385,032	-		Ga0059261_3251	0.88	+0.3
3,385,141	+				-0.0
3,385,141	+				+0.5
3,385,141	+				-0.8
3,385,141	+				-0.2
3,385,141	+				-0.5
3,385,611	+				-2.0
3,385,612	-				+0.3
3,385,612	-				-0.8
3,385,612	-				+0.4
3,385,612	-				-0.3
3,385,612	-				+1.5
3,385,632	+				-1.5
3,385,632	+				-0.2
3,385,633	-				+0.8
3,385,633	-				-0.7
3,385,715	-		Ga0059261_3253	0.14	+0.2
3,385,782	+		Ga0059261_3253	0.21	-1.8
3,385,783	-		Ga0059261_3253	0.21	+1.0
3,385,818	+		Ga0059261_3253	0.25	-0.4
3,385,819	-		Ga0059261_3253	0.25	+0.6
3,385,819	-		Ga0059261_3253	0.25	+0.1
3,385,819	-		Ga0059261_3253	0.25	+1.1
3,385,819	-		Ga0059261_3253	0.25	-0.1
3,385,819	-		Ga0059261_3253	0.25	+1.5
3,385,873	-		Ga0059261_3253	0.31	+0.5
3,385,873	-		Ga0059261_3253	0.31	+0.1
3,385,900	-		Ga0059261_3253	0.33	-0.2
3,385,900	-		Ga0059261_3253	0.33	+0.5
3,386,041	-		Ga0059261_3253	0.48	+0.9
3,386,041	-		Ga0059261_3253	0.48	+0.5