Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_2575

Experiment: Gentamicin 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gentamicin 0.005 mg/ml
2,661,068	+		Ga0059261_2574	0.60	+0.5
2,661,068	+		Ga0059261_2574	0.60	+0.9
2,661,225	+		Ga0059261_2574	0.68	+0.0
2,661,225	+		Ga0059261_2574	0.68	+0.0
2,661,225	+		Ga0059261_2574	0.68	+0.6
2,661,225	+		Ga0059261_2574	0.68	-0.0
2,661,226	-		Ga0059261_2574	0.68	-0.8
2,661,226	-		Ga0059261_2574	0.68	+0.4
2,661,226	-		Ga0059261_2574	0.68	-0.1
2,661,227	+		Ga0059261_2574	0.68	-0.2
2,661,227	+		Ga0059261_2574	0.68	+1.0
2,661,228	-		Ga0059261_2574	0.68	-0.6
2,661,228	-		Ga0059261_2574	0.68	+0.4
2,661,228	-		Ga0059261_2574	0.68	-0.9
2,661,260	-		Ga0059261_2574	0.70	-0.1
2,661,260	-		Ga0059261_2574	0.70	-1.0
2,661,404	+		Ga0059261_2574	0.77	-0.0
2,661,404	+		Ga0059261_2574	0.77	+0.1
2,661,404	+		Ga0059261_2574	0.77	+0.1
2,661,404	+		Ga0059261_2574	0.77	+0.4
2,661,404	+		Ga0059261_2574	0.77	-0.7
2,661,405	-		Ga0059261_2574	0.77	-1.7
2,661,405	-		Ga0059261_2574	0.77	-0.5
2,661,405	-		Ga0059261_2574	0.77	-0.1
2,661,405	-		Ga0059261_2574	0.77	+0.2
2,661,440	+		Ga0059261_2574	0.79	-0.8
2,661,440	+		Ga0059261_2574	0.79	-0.3
2,661,440	+		Ga0059261_2574	0.79	-0.3
2,661,440	+		Ga0059261_2574	0.79	+1.5
2,661,440	+		Ga0059261_2574	0.79	-0.0
2,661,440	+		Ga0059261_2574	0.79	-0.1
2,661,441	-		Ga0059261_2574	0.79	-0.3
2,661,441	-		Ga0059261_2574	0.79	+0.5
2,661,441	-		Ga0059261_2574	0.79	+0.7
2,661,441	-		Ga0059261_2574	0.79	+0.1
2,661,441	-		Ga0059261_2574	0.79	+0.6
2,661,441	-		Ga0059261_2574	0.79	+0.5
2,661,441	-		Ga0059261_2574	0.79	-0.5
2,661,441	-		Ga0059261_2574	0.79	-0.6
2,661,441	-		Ga0059261_2574	0.79	+0.0
2,661,441	-		Ga0059261_2574	0.79	-0.0
2,661,441	-		Ga0059261_2574	0.79	+0.7
2,661,533	+		Ga0059261_2574	0.84	-0.4
2,661,533	+		Ga0059261_2574	0.84	+0.4
2,661,533	+		Ga0059261_2574	0.84	-0.0
2,661,533	+		Ga0059261_2574	0.84	+0.5
2,661,533	+		Ga0059261_2574	0.84	+0.2
2,661,534	-		Ga0059261_2574	0.84	+0.5
2,661,534	-		Ga0059261_2574	0.84	-1.1
2,661,534	-		Ga0059261_2574	0.84	-0.9
2,661,545	+		Ga0059261_2574	0.84	-0.4
2,661,623	+		Ga0059261_2574	0.88	-0.1
2,661,623	+		Ga0059261_2574	0.88	+0.1
2,661,623	+		Ga0059261_2574	0.88	+0.0
2,661,624	-		Ga0059261_2574	0.88	+0.7
2,661,624	-		Ga0059261_2574	0.88	+0.0
2,661,624	-		Ga0059261_2574	0.88	+1.3
2,661,624	-		Ga0059261_2574	0.88	+0.3
2,661,662	+				+0.5
2,661,662	+				-0.4
2,661,663	-				-0.0
2,661,663	-				+0.6
2,661,663	-				+1.0
2,661,663	-				+0.9
2,661,668	+				-0.4
2,661,669	-				+0.1
2,661,669	-				+0.3
2,661,669	-				-0.6
2,661,669	-				+0.9
2,661,669	-				+1.4
2,661,698	+				-0.7
2,661,698	+				-0.0
2,661,698	+				+0.3
2,661,698	+				+0.1
2,661,699	-				+0.6
2,661,699	-				-0.1
2,661,872	+				+0.2
2,661,872	+				-0.1
2,661,873	-				+0.4
2,661,873	-				+0.9
2,661,873	-				+0.3
2,661,950	+				-0.5
2,661,950	+				-0.0
2,661,950	+				+1.2
2,661,950	+				+0.4
2,661,950	+				+0.1
2,661,950	+				+0.1
2,661,950	+				-0.0
2,661,951	-				-0.3
2,661,951	-				-0.2
2,661,951	-				+0.0
2,661,951	-				-0.9
2,661,951	-				+0.6
2,661,951	-				+0.5
2,661,951	-				-0.1
2,661,951	-				-2.8
2,661,951	-				+0.4
2,661,951	-				-0.5
2,662,130	+		Ga0059261_2575	0.10	-1.9
2,662,130	+		Ga0059261_2575	0.10	-0.6
2,662,130	+		Ga0059261_2575	0.10	-0.3
2,662,131	-		Ga0059261_2575	0.11	+1.2
2,662,228	+		Ga0059261_2575	0.16	-0.4
2,662,229	-		Ga0059261_2575	0.16	+0.5
2,662,229	-		Ga0059261_2575	0.16	+0.0
2,662,229	-		Ga0059261_2575	0.16	-0.5
2,662,229	-		Ga0059261_2575	0.16	+0.2
2,662,417	-		Ga0059261_2575	0.27	+0.4
2,662,417	-		Ga0059261_2575	0.27	-0.1
2,662,867	+		Ga0059261_2575	0.53	+0.5
2,662,867	+				+2.2
2,663,035	-		Ga0059261_2575	0.63	-1.5
2,663,035	-		Ga0059261_2575	0.63	+0.1
2,663,035	-		Ga0059261_2575	0.63	-0.8
2,663,075	+		Ga0059261_2575	0.65	-1.5
2,663,075	+		Ga0059261_2575	0.65	+0.1
2,663,076	-		Ga0059261_2575	0.65	-0.3
2,663,076	-		Ga0059261_2575	0.65	-0.1
2,663,076	-		Ga0059261_2575	0.65	+0.4
2,663,086	+		Ga0059261_2575	0.66	+0.5
2,663,087	-		Ga0059261_2575	0.66	+0.3
2,663,152	-		Ga0059261_2575	0.69	-0.3
2,663,152	-		Ga0059261_2575	0.69	+0.0
2,663,329	+		Ga0059261_2575	0.80	+0.1
2,663,329	+		Ga0059261_2575	0.80	-0.2
2,663,329	+		Ga0059261_2575	0.80	-0.6
2,663,329	+		Ga0059261_2575	0.80	-0.6
2,663,329	+		Ga0059261_2575	0.80	+0.1
2,663,329	+		Ga0059261_2575	0.80	-0.1
2,663,329	+		Ga0059261_2575	0.80	-0.8
2,663,329	+		Ga0059261_2575	0.80	-0.6
2,663,330	-		Ga0059261_2575	0.80	+0.4
2,663,330	-		Ga0059261_2575	0.80	-0.0
2,663,330	-		Ga0059261_2575	0.80	+1.0
2,663,330	-		Ga0059261_2575	0.80	-0.6
2,663,330	-				-0.1
2,663,330	-		Ga0059261_2575	0.80	-0.8
2,663,330	-		Ga0059261_2575	0.80	-0.5
2,663,330	-		Ga0059261_2575	0.80	-0.1
2,663,330	-				+0.9
2,663,330	-		Ga0059261_2575	0.80	-1.2
2,663,330	-		Ga0059261_2575	0.80	+0.2
2,663,330	-		Ga0059261_2575	0.80	+0.9
2,663,399	+		Ga0059261_2575	0.84	+0.3
2,663,399	+		Ga0059261_2575	0.84	-0.2
2,663,400	-		Ga0059261_2575	0.84	+0.9
2,663,400	-		Ga0059261_2575	0.84	+0.2
2,663,400	-		Ga0059261_2575	0.84	-1.3
2,663,738	+				-0.4
2,663,822	+				-0.4
2,663,822	+				+0.8
2,663,822	+				-0.8
2,663,822	+				+0.6
2,663,822	+				+0.6
2,663,823	-				-0.4
2,663,823	-				-0.2
2,663,856	+				+1.5
2,663,856	+				-0.9
2,663,856	+				+0.1
2,663,856	+				+1.9
2,663,857	-				-0.1
2,663,884	+				+0.7
2,663,885	-				+0.1
2,663,885	-				-1.1
2,663,943	-				-0.3
2,663,943	-				+1.3
2,664,026	+		Ga0059261_2576	0.13	-1.7
2,664,026	+		Ga0059261_2576	0.13	-1.2
2,664,026	+		Ga0059261_2576	0.13	+0.9
2,664,026	+				-0.1
2,664,026	+		Ga0059261_2576	0.13	-0.4
2,664,026	+		Ga0059261_2576	0.13	-1.0
2,664,027	-		Ga0059261_2576	0.13	+0.1
2,664,027	-		Ga0059261_2576	0.13	+0.1
2,664,027	-		Ga0059261_2576	0.13	+0.6
2,664,027	-		Ga0059261_2576	0.13	-0.1
2,664,031	+		Ga0059261_2576	0.14	+0.5
2,664,031	+		Ga0059261_2576	0.14	-0.3
2,664,031	+		Ga0059261_2576	0.14	-0.2
2,664,032	-		Ga0059261_2576	0.14	-0.1
2,664,032	-		Ga0059261_2576	0.14	+0.2
2,664,032	-		Ga0059261_2576	0.14	-0.5
2,664,032	-				+0.9
2,664,207	+		Ga0059261_2576	0.35	-1.5
2,664,207	+		Ga0059261_2576	0.35	-0.7
2,664,207	+		Ga0059261_2576	0.35	+0.6
2,664,207	+		Ga0059261_2576	0.35	-0.5
2,664,207	+		Ga0059261_2576	0.35	+0.4
2,664,207	+		Ga0059261_2576	0.35	+0.1
2,664,207	+		Ga0059261_2576	0.35	-1.1
2,664,208	-		Ga0059261_2576	0.35	+0.7
2,664,208	-				+0.9
2,664,208	-		Ga0059261_2576	0.35	-0.4
2,664,208	-		Ga0059261_2576	0.35	+0.2
2,664,208	-		Ga0059261_2576	0.35	-0.5
2,664,243	+		Ga0059261_2576	0.39	+0.0
2,664,243	+		Ga0059261_2576	0.39	+0.7
2,664,244	-		Ga0059261_2576	0.40	+0.6
2,664,244	-		Ga0059261_2576	0.40	+0.1
2,664,244	-		Ga0059261_2576	0.40	-0.0
2,664,249	+		Ga0059261_2576	0.40	+0.9
2,664,249	+		Ga0059261_2576	0.40	-0.1
2,664,249	+		Ga0059261_2576	0.40	+1.2
2,664,250	-		Ga0059261_2576	0.40	-0.6
2,664,250	-		Ga0059261_2576	0.40	-0.2
2,664,250	-				+0.9
2,664,280	-		Ga0059261_2576	0.44	-0.0
2,664,280	-				+2.5
2,664,280	-		Ga0059261_2576	0.44	+0.2
2,664,280	-		Ga0059261_2576	0.44	-0.3
2,664,307	-		Ga0059261_2576	0.47	-0.2
2,664,330	+		Ga0059261_2576	0.50	+0.1
2,664,330	+		Ga0059261_2576	0.50	-1.1
2,664,330	+		Ga0059261_2576	0.50	-0.1
2,664,330	+		Ga0059261_2576	0.50	-0.2
2,664,330	+				+1.9
2,664,330	+		Ga0059261_2576	0.50	-0.0
2,664,331	-		Ga0059261_2576	0.50	+0.6
2,664,331	-		Ga0059261_2576	0.50	-0.1
2,664,331	-		Ga0059261_2576	0.50	+0.2
2,664,331	-		Ga0059261_2576	0.50	+0.3
2,664,331	-		Ga0059261_2576	0.50	-0.6
2,664,331	-		Ga0059261_2576	0.50	-0.0
2,664,331	-		Ga0059261_2576	0.50	+0.5
2,664,331	-		Ga0059261_2576	0.50	-0.2
2,664,331	-		Ga0059261_2576	0.50	-0.6
2,664,331	-		Ga0059261_2576	0.50	+0.0
2,664,331	-		Ga0059261_2576	0.50	+0.2
2,664,331	-		Ga0059261_2576	0.50	-0.5
2,664,331	-		Ga0059261_2576	0.50	+1.7
2,664,366	+		Ga0059261_2576	0.54	+0.5
2,664,366	+		Ga0059261_2576	0.54	-1.9
2,664,366	+		Ga0059261_2576	0.54	-0.9
2,664,366	+		Ga0059261_2576	0.54	+0.5
2,664,367	-		Ga0059261_2576	0.54	+0.5
2,664,367	-		Ga0059261_2576	0.54	+0.4
2,664,367	-		Ga0059261_2576	0.54	-0.2
2,664,387	+		Ga0059261_2576	0.57	-0.3
2,664,387	+		Ga0059261_2576	0.57	-0.3
2,664,387	+		Ga0059261_2576	0.57	+1.5
2,664,408	+		Ga0059261_2576	0.59	+0.6
2,664,408	+		Ga0059261_2576	0.59	-1.5
2,664,408	+		Ga0059261_2576	0.59	-0.7
2,664,408	+		Ga0059261_2576	0.59	-0.5
2,664,408	+		Ga0059261_2576	0.59	+0.2
2,664,408	+		Ga0059261_2576	0.59	+0.0
2,664,408	+		Ga0059261_2576	0.59	+0.1
2,664,408	+		Ga0059261_2576	0.59	+0.9
2,664,408	+		Ga0059261_2576	0.59	+0.1
2,664,408	+		Ga0059261_2576	0.59	+0.9
2,664,408	+		Ga0059261_2576	0.59	+0.0
2,664,409	-		Ga0059261_2576	0.60	-1.4
2,664,409	-		Ga0059261_2576	0.60	-0.7
2,664,409	-		Ga0059261_2576	0.60	-0.0
2,664,409	-		Ga0059261_2576	0.60	-0.9
2,664,430	+		Ga0059261_2576	0.62	-0.5
2,664,430	+		Ga0059261_2576	0.62	+0.0
2,664,430	+		Ga0059261_2576	0.62	+0.5
2,664,430	+		Ga0059261_2576	0.62	+0.1
2,664,430	+				+0.1
2,664,430	+				+1.9
2,664,431	-		Ga0059261_2576	0.62	+0.2
2,664,431	-		Ga0059261_2576	0.62	+0.9
2,664,431	-		Ga0059261_2576	0.62	-0.6
2,664,431	-		Ga0059261_2576	0.62	+0.1
2,664,431	-		Ga0059261_2576	0.62	+0.2
2,664,431	-		Ga0059261_2576	0.62	-0.0