Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_2215

Experiment: Gentamicin 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gentamicin 0.005 mg/ml
2,319,053	-				+1.0
2,319,053	-				+0.1
2,319,070	-				+1.0
2,319,070	-				-0.3
2,319,070	-				-1.5
2,319,070	-				+0.4
2,319,070	-				-1.8
2,319,070	-				-0.8
2,319,070	-				-0.4
2,319,070	-				+0.3
2,319,072	-				+0.1
2,319,072	-				+0.7
2,319,072	-				+0.1
2,319,072	-				+1.3
2,319,072	-				-0.7
2,319,072	-				+0.7
2,319,072	-				+0.4
2,319,072	-				+0.3
2,319,072	-				+0.2
2,319,072	-				+0.1
2,319,127	+				+0.4
2,319,127	+				+0.1
2,319,127	+				-0.5
2,319,127	+				-0.1
2,319,128	-				+1.0
2,319,128	-				+1.0
2,319,128	-				+0.1
2,319,128	-				-0.1
2,319,197	+				+0.8
2,319,197	+				+0.7
2,319,197	+				-0.0
2,319,197	+				-0.6
2,319,214	+				+0.2
2,319,214	+				-0.1
2,319,592	-		Ga0059261_2214	0.51	+1.0
2,319,592	-		Ga0059261_2214	0.51	+0.4
2,319,592	-		Ga0059261_2214	0.51	+0.4
2,319,592	-		Ga0059261_2214	0.51	-0.1
2,319,593	+		Ga0059261_2214	0.51	-0.4
2,319,593	+		Ga0059261_2214	0.51	-0.3
2,319,705	+		Ga0059261_2214	0.66	+1.0
2,319,705	+		Ga0059261_2214	0.66	-0.1
2,319,705	+		Ga0059261_2214	0.66	+0.3
2,319,705	+		Ga0059261_2214	0.66	+0.6
2,319,705	+		Ga0059261_2214	0.66	+0.4
2,319,705	+		Ga0059261_2214	0.66	-1.0
2,319,706	-		Ga0059261_2214	0.66	+0.4
2,319,706	-		Ga0059261_2214	0.66	+0.2
2,319,706	-		Ga0059261_2214	0.66	-0.2
2,319,706	-		Ga0059261_2214	0.66	-0.6
2,319,706	-		Ga0059261_2214	0.66	-0.3
2,319,706	-		Ga0059261_2214	0.66	-0.6
2,319,706	-		Ga0059261_2214	0.66	-0.0
2,319,708	-		Ga0059261_2214	0.67	+0.6
2,319,795	+		Ga0059261_2214	0.79	+0.2
2,319,796	-		Ga0059261_2214	0.79	+0.1
2,319,796	-		Ga0059261_2214	0.79	-0.6
2,319,796	-		Ga0059261_2214	0.79	-0.0
2,319,796	-		Ga0059261_2214	0.79	+0.1
2,319,819	+		Ga0059261_2214	0.82	+0.1
2,319,819	+		Ga0059261_2214	0.82	+1.0
2,319,819	+		Ga0059261_2214	0.82	-0.0
2,319,820	-		Ga0059261_2214	0.82	-0.0
2,319,820	-		Ga0059261_2214	0.82	+0.7
2,319,861	+		Ga0059261_2214	0.88	+0.1
2,319,861	+		Ga0059261_2214	0.88	-0.0
2,319,862	-		Ga0059261_2214	0.88	-0.4
2,319,924	+				+0.6
2,319,924	+				+0.5
2,319,924	+				+0.1
2,319,924	+				+0.7
2,319,924	+				+0.0
2,319,924	+				-0.6
2,319,925	-				+0.5
2,319,981	+				-0.0
2,319,981	+				+0.3
2,319,981	+				-0.7
2,319,981	+				-0.3
2,319,982	-				-0.2
2,319,982	-				+1.5
2,319,982	-				+0.5
2,319,982	-				-0.6
2,319,982	-				+0.2
2,319,983	+				-0.2
2,319,983	+				+1.0
2,319,983	+				-1.0
2,319,983	+				+0.6
2,319,983	+				+0.5
2,319,983	+				-0.3
2,319,983	+				+0.5
2,319,983	+				+0.3
2,319,983	+				+0.8
2,319,983	+				-0.4
2,319,983	+				-0.1
2,319,983	+				-0.3
2,319,984	-				+0.5
2,319,984	-				+0.4
2,319,984	-				-0.6
2,319,984	-				+0.1
2,319,984	-				+0.7
2,319,984	-				+0.2
2,319,984	-				-0.1
2,319,984	-				+1.0
2,319,984	-				-0.1
2,319,984	-				-0.0
2,319,984	-				-0.3
2,319,984	-				+1.5
2,319,984	-				-0.4
2,319,984	-				+0.7
2,319,984	-				-0.2
2,319,984	-				-0.7
2,319,984	-				+0.1
2,319,989	+				-0.2
2,320,046	+		Ga0059261_2215	0.19	+0.2
2,320,046	+		Ga0059261_2215	0.19	-0.0
2,320,047	-		Ga0059261_2215	0.19	+0.4
2,320,047	-		Ga0059261_2215	0.19	+0.1
2,320,484	+				-0.0
2,320,484	+				+0.2
2,320,484	+				-0.3
2,320,484	+				-1.1
2,320,484	+				+1.5
2,320,484	+				+0.5
2,320,484	+				+0.1
2,320,484	+				-0.3
2,320,484	+				+1.0
2,320,484	+				+0.9
2,320,484	+				+0.4
2,320,484	+				+0.1
2,320,485	-				+0.8
2,320,485	-				+0.4
2,320,485	-				+0.2
2,320,485	-				-0.1
2,320,485	-				-0.2
2,320,485	-				-0.4
2,320,485	-				-0.2
2,320,485	-				+0.4
2,320,485	-				+0.0
2,320,485	-				-0.1
2,320,485	-				+1.2
2,320,487	-				+1.0
2,320,660	+		Ga0059261_2216	0.24	+0.2
2,320,660	+		Ga0059261_2216	0.24	-0.2
2,320,660	+		Ga0059261_2216	0.24	+0.5
2,320,661	-		Ga0059261_2216	0.25	+0.6
2,320,661	-		Ga0059261_2216	0.25	-0.4
2,320,661	-		Ga0059261_2216	0.25	-0.0
2,320,661	-		Ga0059261_2216	0.25	-0.0
2,320,661	-		Ga0059261_2216	0.25	-0.2
2,320,661	-		Ga0059261_2216	0.25	+0.2
2,320,889	+		Ga0059261_2216	0.59	+0.8
2,321,022	+		Ga0059261_2216	0.78	-0.3
2,321,022	+		Ga0059261_2216	0.78	-0.2
2,321,022	+		Ga0059261_2216	0.78	-0.2
2,321,022	+		Ga0059261_2216	0.78	+0.1
2,321,023	-		Ga0059261_2216	0.79	-0.5
2,321,256	-		Ga0059261_2217	0.14	-0.2