Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_1188

Experiment: Gentamicin 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gentamicin 0.005 mg/ml
1,231,235	+		Ga0059261_1187	0.89	+0.4
1,231,235	+		Ga0059261_1187	0.89	-2.0
1,231,235	+		Ga0059261_1187	0.89	+0.2
1,231,236	-		Ga0059261_1187	0.89	-0.4
1,231,236	-		Ga0059261_1187	0.89	+0.2
1,231,311	+				-0.2
1,231,311	+				+0.2
1,231,311	+				+0.5
1,231,311	+				-0.4
1,231,311	+				-0.2
1,231,311	+				+0.6
1,231,312	-				+0.8
1,231,312	-				+0.4
1,231,312	-				-0.8
1,231,312	-				+0.8
1,231,312	-				-1.2
1,231,349	+				-0.2
1,231,353	+				-0.1
1,231,353	+				+0.8
1,231,353	+				+0.1
1,231,353	+				-0.1
1,231,354	-				-0.0
1,231,354	-				+0.8
1,231,354	-				+1.2
1,231,354	-				+0.3
1,231,460	+				+0.4
1,231,461	-				+0.6
1,231,461	-				+0.1
1,231,648	+				+0.4
1,231,648	+				+0.8
1,231,648	+				-0.6
1,231,648	+				+0.8
1,231,648	+				+0.1
1,231,648	+				-1.2
1,231,649	-				-0.3
1,231,649	-				-0.6
1,231,649	-				-0.3
1,231,649	-				+0.3
1,231,663	+				+0.3
1,231,663	+				+0.1
1,231,663	+				+0.2
1,231,664	-				-0.2
1,231,664	-				-0.0
1,231,664	-				+0.2
1,231,664	-				+0.3
1,231,664	-				-0.2
1,231,740	+				-0.0
1,231,762	+				-2.0
1,231,763	-				+0.8
1,231,763	-				-0.0
1,231,763	-				-0.2
1,231,763	-				-0.3
1,231,782	+				-0.5
1,231,782	+				+0.4
1,231,783	-				-0.3
1,231,873	+				-0.1
1,231,873	+				-0.0
1,231,873	+				-0.3
1,231,873	+				-0.2
1,231,873	+				+0.2
1,231,873	+				+0.5
1,231,874	-				+0.6
1,231,874	-				+0.4
1,231,874	-				+0.4
1,231,874	-				-0.4
1,231,874	-				-0.3
1,231,874	-				+0.1
1,231,874	-				-1.2
1,231,874	-				-0.6
1,231,874	-				+0.4
1,231,987	+				-0.6
1,231,987	+				+0.4
1,231,988	-				+0.6
1,232,008	+				-0.0
1,232,008	+				+0.1
1,232,008	+				+0.6
1,232,008	+				+0.8
1,232,008	+				-0.0
1,232,008	+				-0.5
1,232,008	+				+0.0
1,232,008	+				-0.3
1,232,009	-				-0.1
1,232,009	-				-0.3
1,232,009	-				-0.2
1,232,009	-				+0.2
1,232,009	-				-0.5
1,232,042	+				-0.3
1,232,042	+				-0.4
1,232,043	-				-0.1
1,232,043	-				-0.2
1,232,043	-				-0.1
1,232,043	-				+2.6
1,232,043	-				-1.0
1,232,043	-				-0.4
1,232,069	+				+0.0
1,232,069	+				+0.3
1,232,069	+				+0.3
1,232,070	-				+0.2
1,232,126	+				+0.4
1,232,126	+				-0.3
1,232,159	+				+0.3
1,232,159	+				+0.1
1,232,159	+				-0.8
1,232,159	+				-0.0
1,232,159	+				+0.2
1,232,160	-				+0.2
1,232,160	-				+0.2
1,232,160	-				+0.1
1,232,160	-				+0.3
1,232,322	+		Ga0059261_1188	0.15	+2.6
1,232,323	-		Ga0059261_1188	0.15	+0.3
1,232,323	-		Ga0059261_1188	0.15	+1.0
1,232,323	-		Ga0059261_1188	0.15	+0.3
1,232,323	-		Ga0059261_1188	0.15	-0.1
1,232,521	+		Ga0059261_1188	0.35	+1.0
1,232,521	+		Ga0059261_1188	0.35	+0.1
1,232,521	+		Ga0059261_1188	0.35	-0.7
1,232,521	+		Ga0059261_1188	0.35	-0.2
1,232,521	+		Ga0059261_1188	0.35	-0.9
1,232,521	+		Ga0059261_1188	0.35	-0.5
1,232,521	+		Ga0059261_1188	0.35	-0.2
1,232,521	+		Ga0059261_1188	0.35	+0.3
1,232,521	+		Ga0059261_1188	0.35	-0.8
1,232,522	-		Ga0059261_1188	0.36	+0.7
1,232,522	-		Ga0059261_1188	0.36	+0.6
1,232,522	-		Ga0059261_1188	0.36	+0.3
1,232,598	+		Ga0059261_1188	0.43	+0.0
1,232,603	-		Ga0059261_1188	0.44	+0.5
1,232,714	+		Ga0059261_1188	0.56	-0.1
1,232,714	+		Ga0059261_1188	0.56	+0.5
1,232,714	+		Ga0059261_1188	0.56	-0.0
1,232,714	+		Ga0059261_1188	0.56	+0.3
1,232,714	+		Ga0059261_1188	0.56	+0.1
1,232,715	-		Ga0059261_1188	0.56	+0.8
1,232,715	-		Ga0059261_1188	0.56	-0.0
1,232,715	-		Ga0059261_1188	0.56	+0.2
1,232,715	-		Ga0059261_1188	0.56	-0.0
1,232,715	-		Ga0059261_1188	0.56	-0.4
1,232,729	+		Ga0059261_1188	0.57	+0.6
1,232,730	-		Ga0059261_1188	0.57	-0.6
1,232,730	-		Ga0059261_1188	0.57	+1.8
1,232,741	+		Ga0059261_1188	0.58	-0.2
1,232,741	+		Ga0059261_1188	0.58	+0.0
1,232,741	+		Ga0059261_1188	0.58	+0.5
1,232,742	-		Ga0059261_1188	0.59	+0.1
1,232,742	-		Ga0059261_1188	0.59	+0.5
1,232,804	+		Ga0059261_1188	0.65	+0.2
1,232,805	-		Ga0059261_1188	0.65	+2.3
1,232,805	-		Ga0059261_1188	0.65	+0.2
1,232,805	-		Ga0059261_1188	0.65	-0.7
1,232,816	-		Ga0059261_1188	0.66	+0.4
1,232,819	-		Ga0059261_1188	0.67	+0.8
1,232,924	+		Ga0059261_1188	0.78	-0.0
1,232,924	+		Ga0059261_1188	0.78	-0.3
1,232,925	-		Ga0059261_1188	0.78	-0.0
1,233,151	+				-0.9
1,233,151	+				+1.0
1,233,151	+				+0.8
1,233,151	+				+0.3
1,233,152	-				+0.6
1,233,152	-				+0.2
1,233,207	+		Ga0059261_1189	0.49	-0.4
1,233,210	+		Ga0059261_1189	0.51	+0.3
1,233,211	-		Ga0059261_1189	0.51	+0.2
1,233,211	-		Ga0059261_1189	0.51	+0.3
1,233,211	-		Ga0059261_1189	0.51	+0.7
1,233,212	+		Ga0059261_1189	0.52	+0.4
1,233,212	+		Ga0059261_1189	0.52	-0.6
1,233,212	+		Ga0059261_1189	0.52	-0.6
1,233,212	+		Ga0059261_1189	0.52	-0.1
1,233,212	+		Ga0059261_1189	0.52	+0.2
1,233,212	+		Ga0059261_1189	0.52	+0.8
1,233,212	+		Ga0059261_1189	0.52	-0.5
1,233,212	+		Ga0059261_1189	0.52	+0.0
1,233,213	-		Ga0059261_1189	0.53	+0.3
1,233,213	-		Ga0059261_1189	0.53	-0.4
1,233,213	-		Ga0059261_1189	0.53	+0.2
1,233,213	-		Ga0059261_1189	0.53	-0.4
1,233,222	+		Ga0059261_1189	0.59	+0.8
1,233,222	+		Ga0059261_1189	0.59	+0.0
1,233,250	+		Ga0059261_1189	0.79	-1.0
1,233,250	+		Ga0059261_1189	0.79	-1.1
1,233,259	+		Ga0059261_1189	0.86	+0.4
1,233,260	-		Ga0059261_1189	0.86	+0.2
1,233,260	-		Ga0059261_1189	0.86	-2.7
1,233,320	+				+0.8
1,233,320	+				-0.0
1,233,321	-				-1.8
1,233,359	+				-0.8
1,233,360	-				-0.1
1,233,374	+				-0.4
1,233,391	+				-0.6
1,233,392	-				-0.2
1,233,527	+		Ga0059261_1190	0.20	+0.2
1,233,527	+		Ga0059261_1190	0.20	-0.8
1,233,528	-		Ga0059261_1190	0.20	-0.1
1,233,528	-		Ga0059261_1190	0.20	-0.2
1,233,528	-		Ga0059261_1190	0.20	+0.3
1,233,528	-		Ga0059261_1190	0.20	-0.1
1,233,528	-		Ga0059261_1190	0.20	-0.3
1,233,535	+		Ga0059261_1190	0.21	+0.3
1,233,535	+		Ga0059261_1190	0.21	+0.3
1,233,535	+		Ga0059261_1190	0.21	-0.6
1,233,535	+		Ga0059261_1190	0.21	+0.1
1,233,536	-		Ga0059261_1190	0.21	+0.3
1,233,536	-		Ga0059261_1190	0.21	-1.5
1,233,536	-		Ga0059261_1190	0.21	-0.2
1,233,613	+		Ga0059261_1190	0.32	-0.8
1,233,956	+		Ga0059261_1190	0.81	-0.8
1,233,956	+		Ga0059261_1190	0.81	+0.8
1,234,057	+				+0.2
1,234,057	+				-2.7
1,234,058	-				+0.2