Experiment: m.b. benzoic 0.16 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_4195 and Dshi_4196 are separated by 3 nucleotides Dshi_4196 and Dshi_4197 overlap by 1 nucleotides
Dshi_4195: Dshi_4195 - protein of unknown function DUF112 transmembrane (RefSeq), at 41,874 to 43,385
_4195
Dshi_4196: Dshi_4196 - hypothetical protein (RefSeq), at 43,389 to 43,895
_4196
Dshi_4197: Dshi_4197 - hypothetical protein (RefSeq), at 43,895 to 44,845
_4197
Position (kb) 43
44 Strain fitness (log2 ratio) -1
0
1 at 42.444 kb on - strand, within Dshi_4195 at 42.529 kb on + strand, within Dshi_4195 at 42.674 kb on - strand, within Dshi_4195 at 42.685 kb on + strand, within Dshi_4195 at 42.809 kb on - strand, within Dshi_4195 at 42.927 kb on + strand, within Dshi_4195 at 42.930 kb on - strand, within Dshi_4195 at 42.940 kb on - strand, within Dshi_4195 at 43.065 kb on - strand, within Dshi_4195 at 43.067 kb on - strand, within Dshi_4195 at 43.082 kb on - strand, within Dshi_4195 at 43.188 kb on + strand, within Dshi_4195 at 43.259 kb on - strand at 43.289 kb on - strand at 43.562 kb on - strand, within Dshi_4196 at 43.723 kb on - strand, within Dshi_4196 at 43.809 kb on + strand, within Dshi_4196 at 43.964 kb on - strand at 44.285 kb on - strand, within Dshi_4197 at 44.411 kb on - strand, within Dshi_4197 at 44.494 kb on + strand, within Dshi_4197 at 44.607 kb on + strand, within Dshi_4197 at 44.701 kb on + strand, within Dshi_4197 at 44.719 kb on - strand, within Dshi_4197 at 44.768 kb on + strand at 44.776 kb on - strand at 44.788 kb on + strand at 44.878 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. benzoic 0.16 mg/ml remove 42,444 - Dshi_4195 0.38 +0.4 42,529 + Dshi_4195 0.43 -1.4 42,674 - Dshi_4195 0.53 -0.3 42,685 + Dshi_4195 0.54 -0.1 42,809 - Dshi_4195 0.62 -0.6 42,927 + Dshi_4195 0.70 +0.8 42,930 - Dshi_4195 0.70 +0.8 42,940 - Dshi_4195 0.71 +0.8 43,065 - Dshi_4195 0.79 -0.9 43,067 - Dshi_4195 0.79 -0.8 43,082 - Dshi_4195 0.80 +0.6 43,188 + Dshi_4195 0.87 -0.6 43,259 - -0.5 43,289 - +0.7 43,562 - Dshi_4196 0.34 -0.5 43,723 - Dshi_4196 0.66 +1.3 43,809 + Dshi_4196 0.83 +1.4 43,964 - -0.9 44,285 - Dshi_4197 0.41 +0.6 44,411 - Dshi_4197 0.54 -0.6 44,494 + Dshi_4197 0.63 -0.2 44,607 + Dshi_4197 0.75 -0.6 44,701 + Dshi_4197 0.85 -1.2 44,719 - Dshi_4197 0.87 -0.8 44,768 + -1.2 44,776 - +0.6 44,788 + -0.5 44,878 + +0.1
Or see this region's nucleotide sequence