Experiment: m.b. benzoic 0.16 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_3513 and Dshi_3514 are separated by 98 nucleotides Dshi_3514 and Dshi_3515 are separated by 3 nucleotides
Dshi_3513: Dshi_3513 - Zeta-phytoene desaturase (RefSeq), at 3,691,944 to 3,693,542
_3513
Dshi_3514: Dshi_3514 - Polyprenyl synthetase (RefSeq), at 3,693,641 to 3,694,519
_3514
Dshi_3515: Dshi_3515 - O-methyltransferase family 2 (RefSeq), at 3,694,523 to 3,695,653
_3515
Position (kb)
3693
3694
3695 Strain fitness (log2 ratio)
-1
0
1
2 at 3692.795 kb on - strand, within Dshi_3513 at 3692.809 kb on + strand, within Dshi_3513 at 3692.903 kb on - strand, within Dshi_3513 at 3693.042 kb on - strand, within Dshi_3513 at 3693.161 kb on + strand, within Dshi_3513 at 3693.203 kb on + strand, within Dshi_3513 at 3693.211 kb on - strand, within Dshi_3513 at 3693.278 kb on + strand, within Dshi_3513 at 3693.278 kb on + strand, within Dshi_3513 at 3693.364 kb on - strand, within Dshi_3513 at 3693.448 kb on + strand at 3693.456 kb on - strand at 3693.493 kb on - strand at 3693.513 kb on - strand at 3693.513 kb on - strand at 3693.579 kb on + strand at 3693.637 kb on + strand at 3693.680 kb on + strand at 3693.729 kb on - strand, within Dshi_3514 at 3693.748 kb on + strand, within Dshi_3514 at 3693.756 kb on - strand, within Dshi_3514 at 3693.799 kb on - strand, within Dshi_3514 at 3693.827 kb on + strand, within Dshi_3514 at 3693.831 kb on - strand, within Dshi_3514 at 3693.899 kb on - strand, within Dshi_3514 at 3693.942 kb on + strand, within Dshi_3514 at 3693.950 kb on - strand, within Dshi_3514 at 3693.950 kb on - strand, within Dshi_3514 at 3693.959 kb on + strand, within Dshi_3514 at 3693.985 kb on - strand, within Dshi_3514 at 3694.008 kb on - strand, within Dshi_3514 at 3694.100 kb on + strand, within Dshi_3514 at 3694.133 kb on + strand, within Dshi_3514 at 3694.141 kb on - strand, within Dshi_3514 at 3694.145 kb on - strand, within Dshi_3514 at 3694.170 kb on - strand, within Dshi_3514 at 3694.188 kb on - strand, within Dshi_3514 at 3694.463 kb on + strand at 3694.488 kb on + strand at 3694.632 kb on - strand at 3694.745 kb on - strand, within Dshi_3515 at 3694.811 kb on - strand, within Dshi_3515 at 3694.839 kb on - strand, within Dshi_3515 at 3694.858 kb on + strand, within Dshi_3515 at 3694.931 kb on + strand, within Dshi_3515 at 3695.077 kb on + strand, within Dshi_3515 at 3695.265 kb on - strand, within Dshi_3515 at 3695.316 kb on + strand, within Dshi_3515 at 3695.326 kb on + strand, within Dshi_3515 at 3695.326 kb on + strand, within Dshi_3515 at 3695.326 kb on + strand, within Dshi_3515 at 3695.334 kb on - strand, within Dshi_3515 at 3695.334 kb on - strand, within Dshi_3515 at 3695.334 kb on - strand, within Dshi_3515 at 3695.395 kb on - strand, within Dshi_3515 at 3695.425 kb on - strand, within Dshi_3515
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. benzoic 0.16 mg/ml remove 3,692,795 - Dshi_3513 0.53 +0.5 3,692,809 + Dshi_3513 0.54 -0.3 3,692,903 - Dshi_3513 0.60 -0.0 3,693,042 - Dshi_3513 0.69 +0.1 3,693,161 + Dshi_3513 0.76 +0.3 3,693,203 + Dshi_3513 0.79 -1.0 3,693,211 - Dshi_3513 0.79 +0.5 3,693,278 + Dshi_3513 0.83 +0.5 3,693,278 + Dshi_3513 0.83 +0.4 3,693,364 - Dshi_3513 0.89 +1.7 3,693,448 + +2.3 3,693,456 - +0.4 3,693,493 - +0.6 3,693,513 - +0.2 3,693,513 - -0.7 3,693,579 + -0.0 3,693,637 + -1.0 3,693,680 + +0.2 3,693,729 - Dshi_3514 0.10 -1.4 3,693,748 + Dshi_3514 0.12 -0.2 3,693,756 - Dshi_3514 0.13 +0.9 3,693,799 - Dshi_3514 0.18 +0.6 3,693,827 + Dshi_3514 0.21 +0.2 3,693,831 - Dshi_3514 0.22 -0.2 3,693,899 - Dshi_3514 0.29 +0.1 3,693,942 + Dshi_3514 0.34 +0.1 3,693,950 - Dshi_3514 0.35 -0.5 3,693,950 - Dshi_3514 0.35 -0.0 3,693,959 + Dshi_3514 0.36 -0.2 3,693,985 - Dshi_3514 0.39 +0.2 3,694,008 - Dshi_3514 0.42 +1.5 3,694,100 + Dshi_3514 0.52 +0.5 3,694,133 + Dshi_3514 0.56 +0.6 3,694,141 - Dshi_3514 0.57 -0.0 3,694,145 - Dshi_3514 0.57 +1.0 3,694,170 - Dshi_3514 0.60 +0.5 3,694,188 - Dshi_3514 0.62 +0.2 3,694,463 + -0.5 3,694,488 + -0.3 3,694,632 - +0.2 3,694,745 - Dshi_3515 0.20 +0.3 3,694,811 - Dshi_3515 0.25 -0.9 3,694,839 - Dshi_3515 0.28 -0.4 3,694,858 + Dshi_3515 0.30 -0.4 3,694,931 + Dshi_3515 0.36 -0.0 3,695,077 + Dshi_3515 0.49 -0.2 3,695,265 - Dshi_3515 0.66 +0.7 3,695,316 + Dshi_3515 0.70 +0.3 3,695,326 + Dshi_3515 0.71 +0.7 3,695,326 + Dshi_3515 0.71 -0.7 3,695,326 + Dshi_3515 0.71 +0.5 3,695,334 - Dshi_3515 0.72 -0.0 3,695,334 - Dshi_3515 0.72 +0.7 3,695,334 - Dshi_3515 0.72 +0.0 3,695,395 - Dshi_3515 0.77 -0.8 3,695,425 - Dshi_3515 0.80 +0.2
Or see this region's nucleotide sequence