Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_3343

Experiment: m.b. benzoic 0.16 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. benzoic 0.16 mg/ml
3,508,483	-		Dshi_3341	0.62	+0.4
3,508,563	+		Dshi_3341	0.68	-0.0
3,508,633	+		Dshi_3341	0.73	-0.7
3,508,643	+		Dshi_3341	0.74	-0.0
3,508,709	-		Dshi_3341	0.78	-0.0
3,508,802	-		Dshi_3341	0.85	+1.1
3,508,919	+				+0.2
3,508,962	-				+1.0
3,508,974	+				+0.0
3,509,095	+				-0.1
3,509,095	+				+1.0
3,509,204	-		Dshi_3342	0.34	+0.2
3,509,269	-		Dshi_3342	0.49	+0.9
3,509,363	-		Dshi_3342	0.71	+1.1
3,509,444	+				-0.0
3,509,444	+				-0.8
3,509,452	-				+0.3
3,509,452	-				+0.3
3,509,452	-				+0.3
3,509,466	+				+0.1
3,509,507	+				-0.1
3,509,571	-				+0.6
3,509,823	-		Dshi_3343	0.28	-1.3
3,509,847	-		Dshi_3343	0.30	-0.5
3,509,848	-		Dshi_3343	0.30	+0.2
3,509,918	-		Dshi_3343	0.35	+1.2
3,509,929	+		Dshi_3343	0.36	-0.1
3,510,083	+		Dshi_3343	0.49	-0.3
3,510,088	+		Dshi_3343	0.49	-0.3
3,510,105	+		Dshi_3343	0.50	-0.0
3,510,199	+		Dshi_3343	0.58	+0.1
3,510,199	+		Dshi_3343	0.58	-1.0
3,510,283	-		Dshi_3343	0.65	-0.3
3,510,309	-		Dshi_3343	0.67	-0.3
3,510,454	+		Dshi_3343	0.78	-0.3
3,510,454	+		Dshi_3343	0.78	+0.2
3,510,521	-		Dshi_3343	0.84	-2.0
3,510,521	-		Dshi_3343	0.84	-0.0
3,510,720	+				+0.5
3,510,728	-				+0.1
3,510,742	+				+1.0
3,510,742	+				+0.7
3,510,750	-				+1.2
3,510,819	+		Dshi_3344	0.11	+0.0
3,510,819	+		Dshi_3344	0.11	-0.3
3,510,824	+		Dshi_3344	0.12	+1.7
3,510,827	-		Dshi_3344	0.12	+0.1
3,510,906	-		Dshi_3344	0.21	-0.2
3,510,906	-		Dshi_3344	0.21	+1.1
3,510,913	+		Dshi_3344	0.21	-1.9
3,510,934	+		Dshi_3344	0.24	+1.3
3,511,119	-		Dshi_3344	0.43	+0.6
3,511,166	+		Dshi_3344	0.48	-0.6
3,511,207	-		Dshi_3344	0.52	+0.3
3,511,216	+		Dshi_3344	0.53	+1.0
3,511,220	+		Dshi_3344	0.53	-1.0
3,511,272	+				+1.6
3,511,280	-		Dshi_3344	0.60	-0.2
3,511,308	-		Dshi_3344	0.63	-0.9
3,511,415	-		Dshi_3344	0.74	+0.4
3,511,469	+		Dshi_3344	0.79	+3.0
3,511,472	+		Dshi_3344	0.80	+1.0
3,511,541	+		Dshi_3344	0.87	+1.0
3,511,541	+		Dshi_3344	0.87	+1.0
3,511,554	-		Dshi_3344	0.88	+0.3
3,511,599	+				-0.1
3,511,599	+				+0.2
3,511,605	+				-0.4