Experiment: m.b. benzoic 0.16 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_3033 and Dshi_3034 are separated by 103 nucleotides Dshi_3034 and Dshi_3035 are separated by 18 nucleotides Dshi_3035 and Dshi_3036 are separated by 102 nucleotides
Dshi_3033: Dshi_3033 - Fmu (Sun) domain protein (RefSeq), at 3,201,216 to 3,202,547
_3033
Dshi_3034: Dshi_3034 - protein of unknown function DUF1674 (RefSeq), at 3,202,651 to 3,202,875
_3034
Dshi_3035: Dshi_3035 - hypothetical protein (RefSeq), at 3,202,894 to 3,203,289
_3035
Dshi_3036: Dshi_3036 - acriflavin resistance protein (RefSeq), at 3,203,392 to 3,206,619
_3036
Position (kb)
3202
3203
3204 Strain fitness (log2 ratio)
-2
-1
0
1 at 3202.085 kb on - strand, within Dshi_3033 at 3202.170 kb on + strand, within Dshi_3033 at 3202.175 kb on + strand, within Dshi_3033 at 3202.188 kb on - strand, within Dshi_3033 at 3202.296 kb on - strand, within Dshi_3033 at 3202.527 kb on + strand at 3202.592 kb on + strand at 3202.600 kb on - strand at 3202.699 kb on - strand, within Dshi_3034 at 3202.712 kb on + strand, within Dshi_3034 at 3202.883 kb on + strand at 3202.932 kb on + strand at 3202.937 kb on + strand, within Dshi_3035 at 3203.003 kb on + strand, within Dshi_3035 at 3203.011 kb on - strand, within Dshi_3035 at 3203.065 kb on + strand, within Dshi_3035 at 3203.068 kb on - strand, within Dshi_3035 at 3203.073 kb on - strand, within Dshi_3035 at 3203.096 kb on + strand, within Dshi_3035 at 3203.096 kb on - strand, within Dshi_3035 at 3203.104 kb on - strand, within Dshi_3035 at 3203.111 kb on - strand, within Dshi_3035 at 3203.196 kb on - strand, within Dshi_3035 at 3203.228 kb on - strand, within Dshi_3035 at 3203.266 kb on + strand at 3203.302 kb on + strand at 3203.313 kb on - strand at 3203.339 kb on - strand at 3203.429 kb on + strand at 3203.583 kb on + strand at 3203.600 kb on + strand at 3203.629 kb on - strand at 3203.704 kb on - strand at 3203.783 kb on + strand, within Dshi_3036 at 3203.961 kb on - strand, within Dshi_3036 at 3203.971 kb on + strand, within Dshi_3036 at 3203.971 kb on + strand, within Dshi_3036 at 3203.979 kb on - strand, within Dshi_3036 at 3203.979 kb on - strand, within Dshi_3036 at 3204.061 kb on - strand, within Dshi_3036 at 3204.071 kb on - strand, within Dshi_3036 at 3204.098 kb on - strand, within Dshi_3036 at 3204.171 kb on + strand, within Dshi_3036 at 3204.171 kb on + strand, within Dshi_3036
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. benzoic 0.16 mg/ml remove 3,202,085 - Dshi_3033 0.65 +1.3 3,202,170 + Dshi_3033 0.72 +0.2 3,202,175 + Dshi_3033 0.72 -0.4 3,202,188 - Dshi_3033 0.73 -0.0 3,202,296 - Dshi_3033 0.81 -0.5 3,202,527 + -0.3 3,202,592 + -0.1 3,202,600 - +1.1 3,202,699 - Dshi_3034 0.21 -2.4 3,202,712 + Dshi_3034 0.27 -0.7 3,202,883 + -0.0 3,202,932 + +0.5 3,202,937 + Dshi_3035 0.11 +0.2 3,203,003 + Dshi_3035 0.28 +0.2 3,203,011 - Dshi_3035 0.30 +0.1 3,203,065 + Dshi_3035 0.43 +0.8 3,203,068 - Dshi_3035 0.44 +1.4 3,203,073 - Dshi_3035 0.45 +0.5 3,203,096 + Dshi_3035 0.51 +0.3 3,203,096 - Dshi_3035 0.51 +0.4 3,203,104 - Dshi_3035 0.53 +1.2 3,203,111 - Dshi_3035 0.55 +0.0 3,203,196 - Dshi_3035 0.76 +0.4 3,203,228 - Dshi_3035 0.84 +0.4 3,203,266 + -0.5 3,203,302 + +0.5 3,203,313 - -0.2 3,203,339 - +0.4 3,203,429 + -0.7 3,203,583 + -0.2 3,203,600 + -1.5 3,203,629 - -0.1 3,203,704 - +0.7 3,203,783 + Dshi_3036 0.12 -0.6 3,203,961 - Dshi_3036 0.18 -0.4 3,203,971 + Dshi_3036 0.18 +0.1 3,203,971 + Dshi_3036 0.18 +0.2 3,203,979 - Dshi_3036 0.18 -1.1 3,203,979 - Dshi_3036 0.18 +0.2 3,204,061 - Dshi_3036 0.21 +1.0 3,204,071 - Dshi_3036 0.21 +1.2 3,204,098 - Dshi_3036 0.22 -0.6 3,204,171 + Dshi_3036 0.24 +0.4 3,204,171 + Dshi_3036 0.24 -0.2
Or see this region's nucleotide sequence