Experiment: m.b. benzoic 0.16 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_2886 and Dshi_2887 are separated by 94 nucleotides Dshi_2887 and Dshi_2888 are separated by 74 nucleotides Dshi_2888 and Dshi_2889 overlap by 4 nucleotides
Dshi_2886: Dshi_2886 - dihydrolipoamide dehydrogenase (RefSeq), at 3,041,719 to 3,043,113
_2886
Dshi_2887: Dshi_2887 - succinic semialdehyde dehydrogenase (RefSeq), at 3,043,208 to 3,044,686
_2887
Dshi_2888: Dshi_2888 - putative esterase/lipase/thioesterase (RefSeq), at 3,044,761 to 3,045,534
_2888
Dshi_2889: Dshi_2889 - peptidase S58 DmpA (RefSeq), at 3,045,531 to 3,046,514
_2889
Position (kb)
3043
3044
3045 Strain fitness (log2 ratio)
-2
-1
0
1 at 3043.166 kb on + strand at 3043.166 kb on + strand at 3043.166 kb on + strand at 3043.174 kb on - strand at 3043.286 kb on - strand at 3043.370 kb on - strand, within Dshi_2887 at 3043.581 kb on - strand, within Dshi_2887 at 3043.621 kb on + strand, within Dshi_2887 at 3043.684 kb on - strand, within Dshi_2887 at 3043.712 kb on - strand, within Dshi_2887 at 3043.793 kb on + strand, within Dshi_2887 at 3043.796 kb on - strand, within Dshi_2887 at 3043.944 kb on - strand, within Dshi_2887 at 3043.949 kb on - strand, within Dshi_2887 at 3043.981 kb on + strand, within Dshi_2887 at 3043.991 kb on - strand, within Dshi_2887 at 3044.075 kb on - strand, within Dshi_2887 at 3044.277 kb on + strand, within Dshi_2887 at 3044.401 kb on - strand, within Dshi_2887 at 3044.721 kb on + strand at 3044.896 kb on - strand, within Dshi_2888 at 3045.000 kb on - strand, within Dshi_2888 at 3045.027 kb on + strand, within Dshi_2888 at 3045.070 kb on - strand, within Dshi_2888 at 3045.296 kb on + strand, within Dshi_2888 at 3045.296 kb on - strand, within Dshi_2888 at 3045.383 kb on - strand, within Dshi_2888 at 3045.388 kb on - strand, within Dshi_2888 at 3045.424 kb on + strand, within Dshi_2888 at 3045.429 kb on + strand, within Dshi_2888 at 3045.437 kb on - strand, within Dshi_2888 at 3045.556 kb on + strand at 3045.673 kb on - strand, within Dshi_2889
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. benzoic 0.16 mg/ml remove 3,043,166 + +0.0 3,043,166 + +0.2 3,043,166 + +0.9 3,043,174 - +0.1 3,043,286 - +1.3 3,043,370 - Dshi_2887 0.11 -0.4 3,043,581 - Dshi_2887 0.25 -0.1 3,043,621 + Dshi_2887 0.28 -0.4 3,043,684 - Dshi_2887 0.32 -0.1 3,043,712 - Dshi_2887 0.34 -0.5 3,043,793 + Dshi_2887 0.40 -0.7 3,043,796 - Dshi_2887 0.40 +0.7 3,043,944 - Dshi_2887 0.50 -0.4 3,043,949 - Dshi_2887 0.50 -0.6 3,043,981 + Dshi_2887 0.52 -2.0 3,043,991 - Dshi_2887 0.53 +0.5 3,044,075 - Dshi_2887 0.59 -0.1 3,044,277 + Dshi_2887 0.72 +0.3 3,044,401 - Dshi_2887 0.81 -0.8 3,044,721 + +0.1 3,044,896 - Dshi_2888 0.17 -0.7 3,045,000 - Dshi_2888 0.31 -1.7 3,045,027 + Dshi_2888 0.34 -0.9 3,045,070 - Dshi_2888 0.40 -1.1 3,045,296 + Dshi_2888 0.69 +0.6 3,045,296 - Dshi_2888 0.69 -0.9 3,045,383 - Dshi_2888 0.80 -0.1 3,045,388 - Dshi_2888 0.81 -0.5 3,045,424 + Dshi_2888 0.86 +0.2 3,045,429 + Dshi_2888 0.86 -0.9 3,045,437 - Dshi_2888 0.87 -0.3 3,045,556 + +1.3 3,045,673 - Dshi_2889 0.14 +0.2
Or see this region's nucleotide sequence