Experiment: m.b. benzoic 0.16 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_2439 and Dshi_2440 overlap by 4 nucleotides Dshi_2440 and Dshi_2441 are separated by 60 nucleotides
Dshi_2439: Dshi_2439 - protein of unknown function DUF112 transmembrane (RefSeq), at 2,581,868 to 2,583,352
_2439
Dshi_2440: Dshi_2440 - hypothetical protein (RefSeq), at 2,583,349 to 2,583,807
_2440
Dshi_2441: Dshi_2441 - hypothetical protein (RefSeq), at 2,583,868 to 2,584,830
_2441
Position (kb)
2583
2584 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2582.352 kb on - strand, within Dshi_2439 at 2582.410 kb on - strand, within Dshi_2439 at 2582.429 kb on - strand, within Dshi_2439 at 2582.429 kb on - strand, within Dshi_2439 at 2582.613 kb on - strand, within Dshi_2439 at 2582.624 kb on - strand, within Dshi_2439 at 2582.653 kb on + strand, within Dshi_2439 at 2582.803 kb on - strand, within Dshi_2439 at 2582.806 kb on + strand, within Dshi_2439 at 2582.842 kb on + strand, within Dshi_2439 at 2582.897 kb on - strand, within Dshi_2439 at 2583.000 kb on + strand, within Dshi_2439 at 2583.018 kb on + strand, within Dshi_2439 at 2583.026 kb on - strand, within Dshi_2439 at 2583.037 kb on - strand, within Dshi_2439 at 2583.102 kb on + strand, within Dshi_2439 at 2583.333 kb on - strand at 2583.333 kb on - strand at 2583.333 kb on - strand at 2583.333 kb on - strand at 2583.336 kb on + strand at 2583.421 kb on - strand, within Dshi_2440 at 2583.436 kb on - strand, within Dshi_2440 at 2583.533 kb on - strand, within Dshi_2440 at 2583.656 kb on + strand, within Dshi_2440 at 2583.669 kb on + strand, within Dshi_2440 at 2583.672 kb on - strand, within Dshi_2440 at 2583.779 kb on + strand at 2583.817 kb on + strand at 2583.841 kb on + strand at 2583.869 kb on - strand at 2583.873 kb on + strand at 2583.879 kb on + strand at 2583.968 kb on + strand, within Dshi_2441 at 2583.968 kb on + strand, within Dshi_2441 at 2584.015 kb on - strand, within Dshi_2441 at 2584.077 kb on + strand, within Dshi_2441 at 2584.124 kb on - strand, within Dshi_2441 at 2584.139 kb on - strand, within Dshi_2441 at 2584.200 kb on + strand, within Dshi_2441 at 2584.263 kb on - strand, within Dshi_2441 at 2584.294 kb on - strand, within Dshi_2441 at 2584.309 kb on - strand, within Dshi_2441 at 2584.309 kb on - strand, within Dshi_2441 at 2584.358 kb on - strand, within Dshi_2441 at 2584.360 kb on + strand, within Dshi_2441 at 2584.365 kb on + strand, within Dshi_2441 at 2584.460 kb on + strand, within Dshi_2441 at 2584.468 kb on - strand, within Dshi_2441 at 2584.550 kb on - strand, within Dshi_2441 at 2584.555 kb on - strand, within Dshi_2441 at 2584.571 kb on - strand, within Dshi_2441 at 2584.652 kb on + strand at 2584.659 kb on - strand, within Dshi_2441 at 2584.660 kb on - strand, within Dshi_2441 at 2584.793 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. benzoic 0.16 mg/ml remove 2,582,352 - Dshi_2439 0.33 -0.5 2,582,410 - Dshi_2439 0.36 +2.4 2,582,429 - Dshi_2439 0.38 -0.5 2,582,429 - Dshi_2439 0.38 +1.3 2,582,613 - Dshi_2439 0.50 +0.3 2,582,624 - Dshi_2439 0.51 +0.0 2,582,653 + Dshi_2439 0.53 -2.2 2,582,803 - Dshi_2439 0.63 +0.4 2,582,806 + Dshi_2439 0.63 +0.1 2,582,842 + Dshi_2439 0.66 +0.1 2,582,897 - Dshi_2439 0.69 +0.7 2,583,000 + Dshi_2439 0.76 -0.6 2,583,018 + Dshi_2439 0.77 -0.5 2,583,026 - Dshi_2439 0.78 +0.2 2,583,037 - Dshi_2439 0.79 -0.9 2,583,102 + Dshi_2439 0.83 +0.3 2,583,333 - -0.1 2,583,333 - -2.2 2,583,333 - -0.0 2,583,333 - -0.4 2,583,336 + -0.2 2,583,421 - Dshi_2440 0.16 +0.6 2,583,436 - Dshi_2440 0.19 +0.5 2,583,533 - Dshi_2440 0.40 +1.3 2,583,656 + Dshi_2440 0.67 +0.1 2,583,669 + Dshi_2440 0.70 +0.0 2,583,672 - Dshi_2440 0.70 +1.1 2,583,779 + -1.3 2,583,817 + -0.5 2,583,841 + -0.5 2,583,869 - +0.2 2,583,873 + -0.0 2,583,879 + -0.9 2,583,968 + Dshi_2441 0.10 +0.4 2,583,968 + Dshi_2441 0.10 -0.2 2,584,015 - Dshi_2441 0.15 +0.1 2,584,077 + Dshi_2441 0.22 -0.2 2,584,124 - Dshi_2441 0.27 +0.8 2,584,139 - Dshi_2441 0.28 +0.5 2,584,200 + Dshi_2441 0.34 +0.2 2,584,263 - Dshi_2441 0.41 -0.1 2,584,294 - Dshi_2441 0.44 +0.7 2,584,309 - Dshi_2441 0.46 +0.0 2,584,309 - Dshi_2441 0.46 +0.1 2,584,358 - Dshi_2441 0.51 -0.7 2,584,360 + Dshi_2441 0.51 +0.3 2,584,365 + Dshi_2441 0.52 +0.3 2,584,460 + Dshi_2441 0.61 +0.4 2,584,468 - Dshi_2441 0.62 +0.6 2,584,550 - Dshi_2441 0.71 -0.6 2,584,555 - Dshi_2441 0.71 +1.0 2,584,571 - Dshi_2441 0.73 -0.8 2,584,652 + +0.3 2,584,659 - Dshi_2441 0.82 -0.0 2,584,660 - Dshi_2441 0.82 +0.0 2,584,793 + +0.6
Or see this region's nucleotide sequence