Experiment: MoLS4 with L-Serine (N), without W
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt gltB and DVU1822 are separated by 2 nucleotides DVU1822 and gltB-1 are separated by 14 nucleotides
DVU1821: gltB - glutamate synthase, large subunit (VIMSS_AUTO), at 1,885,906 to 1,886,661
gltB
DVU1822: DVU1822 - glutamate synthase, amidotransferase subunit, putative (TIGR), at 1,886,664 to 1,887,758
DVU1822
DVU1823: gltB-1 - glutamate synthase, iron-sulfur cluster-binding subunit, putative (TIGR), at 1,887,773 to 1,889,296
gltB-1
Position (kb)
1886
1887
1888 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 1885.750 kb on - strand at 1885.750 kb on - strand at 1886.025 kb on - strand, within gltB at 1886.065 kb on + strand, within gltB at 1886.070 kb on + strand, within gltB at 1886.121 kb on - strand, within gltB at 1886.147 kb on + strand, within gltB at 1886.265 kb on - strand, within gltB at 1886.357 kb on - strand, within gltB at 1886.430 kb on - strand, within gltB at 1886.437 kb on - strand, within gltB at 1886.441 kb on + strand, within gltB at 1886.441 kb on + strand, within gltB at 1886.442 kb on - strand, within gltB at 1886.449 kb on - strand, within gltB at 1886.449 kb on - strand, within gltB at 1886.449 kb on - strand, within gltB at 1886.469 kb on + strand, within gltB at 1886.476 kb on + strand, within gltB at 1886.708 kb on + strand at 1886.708 kb on + strand at 1886.716 kb on - strand at 1886.716 kb on - strand at 1886.874 kb on + strand, within DVU1822 at 1886.882 kb on - strand, within DVU1822 at 1886.884 kb on + strand, within DVU1822 at 1887.037 kb on + strand, within DVU1822 at 1887.133 kb on + strand, within DVU1822 at 1887.138 kb on + strand, within DVU1822 at 1887.198 kb on + strand, within DVU1822 at 1887.198 kb on + strand, within DVU1822 at 1887.352 kb on - strand, within DVU1822 at 1887.381 kb on - strand, within DVU1822 at 1887.399 kb on + strand, within DVU1822 at 1887.431 kb on + strand, within DVU1822 at 1887.487 kb on + strand, within DVU1822 at 1887.566 kb on + strand, within DVU1822 at 1887.566 kb on + strand, within DVU1822 at 1887.572 kb on - strand, within DVU1822 at 1887.622 kb on + strand, within DVU1822 at 1887.667 kb on + strand at 1887.681 kb on - strand at 1887.765 kb on + strand at 1887.830 kb on + strand at 1887.831 kb on - strand at 1887.861 kb on + strand at 1887.959 kb on + strand, within gltB-1 at 1887.969 kb on + strand, within gltB-1 at 1887.997 kb on - strand, within gltB-1 at 1888.007 kb on - strand, within gltB-1 at 1888.045 kb on + strand, within gltB-1 at 1888.180 kb on - strand, within gltB-1 at 1888.201 kb on + strand, within gltB-1 at 1888.206 kb on + strand, within gltB-1 at 1888.251 kb on + strand, within gltB-1 at 1888.260 kb on - strand, within gltB-1 at 1888.297 kb on - strand, within gltB-1 at 1888.378 kb on - strand, within gltB-1 at 1888.378 kb on - strand, within gltB-1 at 1888.401 kb on + strand, within gltB-1 at 1888.422 kb on + strand, within gltB-1 at 1888.463 kb on - strand, within gltB-1 at 1888.522 kb on - strand, within gltB-1 at 1888.578 kb on + strand, within gltB-1 at 1888.586 kb on - strand, within gltB-1 at 1888.647 kb on + strand, within gltB-1 at 1888.647 kb on + strand, within gltB-1 at 1888.655 kb on - strand, within gltB-1 at 1888.659 kb on + strand, within gltB-1 at 1888.669 kb on - strand, within gltB-1
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with L-Serine (N), without W remove 1,885,750 - -0.2 1,885,750 - +0.2 1,886,025 - gltB DVU1821 0.16 -2.2 1,886,065 + gltB DVU1821 0.21 -3.6 1,886,070 + gltB DVU1821 0.22 -1.2 1,886,121 - gltB DVU1821 0.28 -2.1 1,886,147 + gltB DVU1821 0.32 -2.3 1,886,265 - gltB DVU1821 0.47 -1.6 1,886,357 - gltB DVU1821 0.60 -3.0 1,886,430 - gltB DVU1821 0.69 -2.4 1,886,437 - gltB DVU1821 0.70 -2.0 1,886,441 + gltB DVU1821 0.71 -3.6 1,886,441 + gltB DVU1821 0.71 -3.4 1,886,442 - gltB DVU1821 0.71 -1.2 1,886,449 - gltB DVU1821 0.72 -2.3 1,886,449 - gltB DVU1821 0.72 -1.4 1,886,449 - gltB DVU1821 0.72 -2.4 1,886,469 + gltB DVU1821 0.74 -1.5 1,886,476 + gltB DVU1821 0.75 -2.2 1,886,708 + -2.7 1,886,708 + -2.4 1,886,716 - -1.3 1,886,716 - -2.6 1,886,874 + DVU1822 0.19 -1.6 1,886,882 - DVU1822 0.20 -1.8 1,886,884 + DVU1822 0.20 -2.8 1,887,037 + DVU1822 0.34 -2.9 1,887,133 + DVU1822 0.43 -2.9 1,887,138 + DVU1822 0.43 -3.1 1,887,198 + DVU1822 0.49 -2.6 1,887,198 + DVU1822 0.49 -1.2 1,887,352 - DVU1822 0.63 -2.7 1,887,381 - DVU1822 0.65 -2.8 1,887,399 + DVU1822 0.67 -2.4 1,887,431 + DVU1822 0.70 -2.8 1,887,487 + DVU1822 0.75 -2.3 1,887,566 + DVU1822 0.82 -2.6 1,887,566 + DVU1822 0.82 -2.7 1,887,572 - DVU1822 0.83 -2.2 1,887,622 + DVU1822 0.87 -3.3 1,887,667 + -3.0 1,887,681 - -3.8 1,887,765 + -2.1 1,887,830 + -2.3 1,887,831 - -1.9 1,887,861 + -2.8 1,887,959 + gltB-1 DVU1823 0.12 -3.7 1,887,969 + gltB-1 DVU1823 0.13 -2.2 1,887,997 - gltB-1 DVU1823 0.15 -2.3 1,888,007 - gltB-1 DVU1823 0.15 -2.0 1,888,045 + gltB-1 DVU1823 0.18 -1.7 1,888,180 - gltB-1 DVU1823 0.27 -2.9 1,888,201 + gltB-1 DVU1823 0.28 -2.4 1,888,206 + gltB-1 DVU1823 0.28 -3.1 1,888,251 + gltB-1 DVU1823 0.31 -2.8 1,888,260 - gltB-1 DVU1823 0.32 -1.9 1,888,297 - gltB-1 DVU1823 0.34 -2.7 1,888,378 - gltB-1 DVU1823 0.40 -0.7 1,888,378 - gltB-1 DVU1823 0.40 -2.6 1,888,401 + gltB-1 DVU1823 0.41 -4.0 1,888,422 + gltB-1 DVU1823 0.43 -2.6 1,888,463 - gltB-1 DVU1823 0.45 -3.1 1,888,522 - gltB-1 DVU1823 0.49 -3.6 1,888,578 + gltB-1 DVU1823 0.53 -1.0 1,888,586 - gltB-1 DVU1823 0.53 -2.7 1,888,647 + gltB-1 DVU1823 0.57 -3.4 1,888,647 + gltB-1 DVU1823 0.57 -2.6 1,888,655 - gltB-1 DVU1823 0.58 -1.8 1,888,659 + gltB-1 DVU1823 0.58 -1.6 1,888,669 - gltB-1 DVU1823 0.59 -2.4
Or see this region's nucleotide sequence