Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_3265

Experiment: KB with capsaicin 0.25 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with capsaicin 0.25 mg/ml
3,909,260	+		Psyr_3264	0.53	-0.1
3,909,261	-		Psyr_3264	0.53	-0.3
3,909,329	+		Psyr_3264	0.57	-0.8
3,909,329	+		Psyr_3264	0.57	-1.1
3,909,329	+		Psyr_3264	0.57	+0.3
3,909,329	+		Psyr_3264	0.57	+0.4
3,909,329	+		Psyr_3264	0.57	+0.7
3,909,329	+		Psyr_3264	0.57	-1.3
3,909,329	+		Psyr_3264	0.57	+0.8
3,909,329	+		Psyr_3264	0.57	-0.5
3,909,329	+		Psyr_3264	0.57	+1.3
3,909,329	+		Psyr_3264	0.57	+0.5
3,909,329	+		Psyr_3264	0.57	+1.1
3,909,329	+		Psyr_3264	0.57	+0.1
3,909,329	+		Psyr_3264	0.57	+0.3
3,909,329	+		Psyr_3264	0.57	+1.8
3,909,329	+		Psyr_3264	0.57	-0.8
3,909,329	+		Psyr_3264	0.57	-1.3
3,909,330	-		Psyr_3264	0.58	-0.2
3,909,330	-		Psyr_3264	0.58	+0.4
3,909,330	-		Psyr_3264	0.58	-1.1
3,909,330	-		Psyr_3264	0.58	+1.0
3,909,330	-		Psyr_3264	0.58	+1.5
3,909,330	-		Psyr_3264	0.58	+0.9
3,909,330	-		Psyr_3264	0.58	+0.1
3,909,330	-		Psyr_3264	0.58	-0.4
3,909,330	-		Psyr_3264	0.58	-2.5
3,909,444	-		Psyr_3264	0.65	-0.9
3,909,756	-		Psyr_3264	0.85	-0.3
3,909,756	-		Psyr_3264	0.85	+0.4
3,909,756	-		Psyr_3264	0.85	+1.5
3,910,005	+				+0.5
3,910,005	+				+1.6
3,910,006	-				+0.5
3,910,006	-				-1.3
3,910,006	-				-0.5
3,910,006	-				+1.4
3,910,006	-				+0.5
3,910,070	+				-0.2
3,910,071	-				-1.6
3,910,421	+		Psyr_3265	0.38	+0.6
3,910,421	+		Psyr_3265	0.38	+0.5
3,910,421	+		Psyr_3265	0.38	+0.4
3,910,421	+		Psyr_3265	0.38	+2.8
3,910,422	-		Psyr_3265	0.38	+0.2
3,910,422	-		Psyr_3265	0.38	+1.5
3,910,444	+		Psyr_3265	0.40	+1.5
3,910,444	+		Psyr_3265	0.40	+1.5
3,910,444	+		Psyr_3265	0.40	-0.8
3,910,444	+		Psyr_3265	0.40	+0.5
3,910,444	+		Psyr_3265	0.40	+0.6
3,910,444	+		Psyr_3265	0.40	-0.2
3,910,445	-		Psyr_3265	0.40	-0.1
3,910,460	+		Psyr_3265	0.42	+0.3
3,910,571	+		Psyr_3265	0.54	+1.4
3,910,571	+		Psyr_3265	0.54	+1.2
3,910,571	+		Psyr_3265	0.54	-0.7
3,910,572	-		Psyr_3265	0.54	+1.7
3,910,572	-		Psyr_3265	0.54	+1.8
3,910,664	+		Psyr_3265	0.64	-0.3
3,910,664	+		Psyr_3265	0.64	+2.1
3,910,664	+		Psyr_3265	0.64	+1.2
3,910,665	-		Psyr_3265	0.64	+0.6
3,910,869	+		Psyr_3265	0.85	-0.1
3,910,869	+		Psyr_3265	0.85	-0.3
3,910,883	+		Psyr_3265	0.87	+0.1
3,910,883	+		Psyr_3265	0.87	-1.5
3,910,883	+		Psyr_3265	0.87	+2.2
3,910,932	+				-2.1
3,911,023	+				+0.2
3,911,024	-				-0.5
3,911,035	-				+2.3
3,911,226	+				+0.3
3,911,226	+				-1.1
3,911,226	+				-1.4
3,911,227	-				-0.5
3,911,227	-				-0.7
3,911,227	-				-0.8
3,911,230	+				-1.1
3,911,230	+				-0.3
3,911,231	-				+0.2
3,911,231	-				+0.5
3,911,231	-				-0.2
3,911,473	-				-0.4
3,911,925	+		Psyr_3266	0.45	+0.6
3,911,926	-		Psyr_3266	0.45	+0.2
3,911,926	-		Psyr_3266	0.45	+3.5
3,911,951	+		Psyr_3266	0.47	+0.1
3,911,951	+		Psyr_3266	0.47	+0.5