Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2855

Experiment: KB with capsaicin 0.25 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with capsaicin 0.25 mg/ml
3,425,802	+				-0.3
3,425,883	-		Psyr_2854	0.13	-4.3
3,425,885	+		Psyr_2854	0.14	-3.1
3,425,954	+		Psyr_2854	0.21	-0.6
3,425,996	+		Psyr_2854	0.25	-1.1
3,426,109	-		Psyr_2854	0.36	-2.8
3,426,238	-		Psyr_2854	0.49	-1.4
3,426,297	+		Psyr_2854	0.55	-0.9
3,426,297	+		Psyr_2854	0.55	-1.4
3,426,298	-		Psyr_2854	0.56	-0.3
3,426,328	+		Psyr_2854	0.59	-1.7
3,426,373	-		Psyr_2854	0.63	-3.0
3,426,403	-		Psyr_2854	0.66	-1.0
3,426,468	+		Psyr_2854	0.73	-2.8
3,426,469	-		Psyr_2854	0.73	-0.9
3,426,486	-		Psyr_2854	0.75	-3.0
3,426,540	+		Psyr_2854	0.80	-0.8
3,426,540	+		Psyr_2854	0.80	-0.6
3,426,540	+		Psyr_2854	0.80	+1.6
3,426,541	-		Psyr_2854	0.80	-2.9
3,426,541	-		Psyr_2854	0.80	-0.4
3,426,541	-		Psyr_2854	0.80	-2.2
3,426,541	-		Psyr_2854	0.80	-0.2
3,426,618	+		Psyr_2854	0.88	+0.2
3,426,619	-		Psyr_2854	0.88	-2.5
3,426,690	+				-0.3
3,426,690	+				-0.2
3,426,740	+				-0.7
3,426,751	+				-1.0
3,426,751	+				-0.8
3,426,757	+				-0.2
3,426,970	+		Psyr_2855	0.21	-1.4
3,426,970	+		Psyr_2855	0.21	-0.4
3,426,976	+		Psyr_2855	0.21	-0.6
3,426,976	+		Psyr_2855	0.21	+0.3
3,427,021	+		Psyr_2855	0.25	-0.5
3,427,194	-		Psyr_2855	0.42	-0.1
3,427,369	+				-1.4
3,427,390	+		Psyr_2855	0.61	-0.7
3,427,390	+		Psyr_2855	0.61	-0.2
3,427,390	+		Psyr_2855	0.61	-0.0
3,427,391	-		Psyr_2855	0.61	-2.0
3,427,391	-		Psyr_2855	0.61	-2.1
3,427,461	-		Psyr_2855	0.68	-3.3
3,427,799	+				-0.3
3,427,799	+				+1.4
3,427,799	+				-0.0
3,427,799	+				-0.2
3,427,800	-				+2.0
3,427,800	-				+0.0
3,427,800	-				+0.2
3,427,876	+				+0.1
3,427,876	+				-0.4
3,427,876	+				+0.7
3,427,876	+				+0.1
3,427,876	+				-0.3
3,427,876	+				-0.4
3,427,876	+				-0.2
3,427,877	-				+0.8
3,427,941	+				+0.6
3,428,079	+		Psyr_2856	0.18	+0.8
3,428,080	-		Psyr_2856	0.18	+0.1
3,428,080	-		Psyr_2856	0.18	+0.1
3,428,192	+		Psyr_2856	0.33	-1.6
3,428,192	+		Psyr_2856	0.33	-0.2
3,428,193	-		Psyr_2856	0.33	+0.6
3,428,193	-		Psyr_2856	0.33	-0.3
3,428,193	-		Psyr_2856	0.33	+0.4
3,428,193	-		Psyr_2856	0.33	+0.6
3,428,193	-				-0.4
3,428,193	-		Psyr_2856	0.33	+0.6
3,428,256	+		Psyr_2856	0.41	-0.3
3,428,257	-		Psyr_2856	0.42	+1.4
3,428,284	+		Psyr_2856	0.45	+0.7
3,428,284	+		Psyr_2856	0.45	-0.2
3,428,285	-		Psyr_2856	0.45	+0.7
3,428,285	-		Psyr_2856	0.45	-0.2
3,428,285	-		Psyr_2856	0.45	+1.1
3,428,294	+		Psyr_2856	0.47	+0.4
3,428,304	+		Psyr_2856	0.48	-0.4
3,428,304	+		Psyr_2856	0.48	-0.2
3,428,305	-		Psyr_2856	0.48	-0.6
3,428,377	+		Psyr_2856	0.58	+0.8
3,428,446	+		Psyr_2856	0.67	-0.1
3,428,446	+		Psyr_2856	0.67	+0.4
3,428,446	+		Psyr_2856	0.67	-0.2
3,428,446	+		Psyr_2856	0.67	+0.7
3,428,446	+		Psyr_2856	0.67	-0.0
3,428,447	-				+2.6
3,428,447	-		Psyr_2856	0.67	+2.4
3,428,447	-		Psyr_2856	0.67	-0.4
3,428,505	+		Psyr_2856	0.75	-0.2
3,428,508	+		Psyr_2856	0.75	-1.2
3,428,509	-		Psyr_2856	0.75	-0.4
3,428,509	-		Psyr_2856	0.75	+0.4
3,428,624	+				+0.5
3,428,625	-				+0.4
3,428,625	-				-0.4
3,428,625	-				+0.0
3,428,650	+				-1.2
3,428,697	+				-0.5
3,428,698	-				-0.3
3,428,707	+				+2.1
3,428,708	-				-0.8
3,428,767	-				+0.0
3,428,770	+				-1.0
3,428,771	-				+0.8
3,428,771	-				-0.2
3,428,771	-				+0.3