Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2620

Experiment: KB with capsaicin 0.25 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with capsaicin 0.25 mg/ml
3,176,490	+		Psyr_2619	0.56	-0.4
3,176,503	+		Psyr_2619	0.57	-1.1
3,176,503	+		Psyr_2619	0.57	-0.1
3,176,525	+		Psyr_2619	0.59	+0.2
3,176,526	-		Psyr_2619	0.59	-0.6
3,176,953	+				-1.0
3,176,953	+				+0.5
3,177,025	+				+0.4
3,177,075	-				-0.9
3,177,247	-				+0.1
3,177,350	+				+0.8
3,177,350	+				-0.1
3,177,350	+				+2.2
3,177,350	+				-0.1
3,177,350	+				-0.4
3,177,351	-				+1.3
3,177,351	-				-0.7
3,177,351	-				-0.9
3,177,356	+				+1.9
3,177,419	+				-0.5
3,177,419	+				+0.7
3,177,419	+				+0.8
3,177,420	-				+1.4
3,177,420	-				-0.7
3,177,424	+				-0.1
3,178,031	+		Psyr_2620	0.48	-1.5
3,178,184	-		Psyr_2620	0.58	-0.1
3,178,429	-		Psyr_2620	0.75	-0.2
3,178,705	-				+1.2
3,178,788	+				-1.3
3,178,788	+				+0.7
3,179,182	-		Psyr_2621	0.37	+0.9
3,179,568	-		Psyr_2621	0.72	+0.9
3,179,568	-		Psyr_2621	0.72	+0.6
3,179,568	-		Psyr_2621	0.72	+1.1
3,179,609	+		Psyr_2621	0.75	+2.6
3,179,609	+		Psyr_2621	0.75	+0.3
3,179,609	+		Psyr_2621	0.75	+0.1
3,179,610	-		Psyr_2621	0.75	+2.6
3,179,610	-		Psyr_2621	0.75	+2.3
3,179,610	-		Psyr_2621	0.75	-1.0
3,179,693	+		Psyr_2621	0.83	-0.3
3,179,693	+		Psyr_2621	0.83	-0.7
3,179,693	+		Psyr_2621	0.83	-0.5
3,179,693	+		Psyr_2621	0.83	+0.2
3,179,694	-		Psyr_2621	0.83	+1.2