Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2364

Experiment: KB with capsaicin 0.25 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with capsaicin 0.25 mg/ml
2,740,994	+		Psyr_2363	0.23	+0.1
2,741,126	+		Psyr_2363	0.38	-1.2
2,741,398	+		Psyr_2363	0.71	-0.2
2,741,398	+		Psyr_2363	0.71	-0.3
2,741,398	+				+0.5
2,741,398	+		Psyr_2363	0.71	-3.2
2,741,398	+		Psyr_2363	0.71	-1.5
2,741,398	+		Psyr_2363	0.71	+0.3
2,741,398	+		Psyr_2363	0.71	-0.7
2,741,398	+		Psyr_2363	0.71	-0.6
2,741,399	-		Psyr_2363	0.71	-0.3
2,741,399	-		Psyr_2363	0.71	-0.8
2,741,399	-		Psyr_2363	0.71	-0.8
2,741,399	-		Psyr_2363	0.71	+0.3
2,741,399	-		Psyr_2363	0.71	+0.5
2,741,399	-		Psyr_2363	0.71	+1.2
2,741,399	-		Psyr_2363	0.71	-2.0
2,741,441	+		Psyr_2363	0.76	+0.9
2,741,524	-		Psyr_2363	0.86	-1.2
2,741,524	-		Psyr_2363	0.86	-1.2
2,741,677	+				+2.5
2,741,677	+				+0.7
2,741,698	-				-0.3
2,741,698	-				-2.3
2,741,716	+				+0.3
2,741,801	+				+0.2
2,741,801	+				-2.5
2,741,801	+				-2.1
2,741,802	-				-2.4
2,741,802	-				-0.3
2,741,802	-				-0.8
2,741,802	-				-1.8
2,742,010	+		Psyr_2364	0.23	+0.1
2,742,010	+		Psyr_2364	0.23	+1.9
2,742,013	+		Psyr_2364	0.24	-0.5
2,742,014	-		Psyr_2364	0.24	-0.2
2,742,112	+		Psyr_2364	0.35	-0.7
2,742,113	-		Psyr_2364	0.36	+0.3
2,742,115	+		Psyr_2364	0.36	-0.0
2,742,116	-		Psyr_2364	0.36	+1.0
2,742,116	-		Psyr_2364	0.36	+1.3
2,742,116	-		Psyr_2364	0.36	+1.3
2,742,226	+		Psyr_2364	0.49	-0.5
2,742,409	+		Psyr_2364	0.71	-0.3
2,743,015	-		Psyr_2365	0.30	-0.2
2,743,041	+		Psyr_2365	0.32	-0.5
2,743,041	+		Psyr_2365	0.32	+2.3
2,743,041	+		Psyr_2365	0.32	+0.9
2,743,041	+		Psyr_2365	0.32	-1.4
2,743,042	-		Psyr_2365	0.32	-0.3
2,743,042	-		Psyr_2365	0.32	+0.0
2,743,122	+		Psyr_2365	0.39	+0.2
2,743,122	+		Psyr_2365	0.39	+0.0
2,743,122	+		Psyr_2365	0.39	-0.6
2,743,122	+		Psyr_2365	0.39	-0.2
2,743,123	-		Psyr_2365	0.39	-1.3
2,743,123	-		Psyr_2365	0.39	-0.5
2,743,123	-		Psyr_2365	0.39	-0.6
2,743,123	-		Psyr_2365	0.39	+0.0
2,743,125	+		Psyr_2365	0.39	+0.2
2,743,126	-		Psyr_2365	0.39	-0.6
2,743,152	+		Psyr_2365	0.41	+0.1
2,743,152	+		Psyr_2365	0.41	-0.1
2,743,284	+		Psyr_2365	0.52	+1.5
2,743,284	+		Psyr_2365	0.52	+0.4
2,743,284	+		Psyr_2365	0.52	+0.3
2,743,452	+		Psyr_2365	0.66	+0.2
2,743,453	-		Psyr_2365	0.66	+0.5
2,743,516	-		Psyr_2365	0.71	+0.2
2,743,575	+		Psyr_2365	0.76	-0.5