Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2287

Experiment: KB with capsaicin 0.25 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with capsaicin 0.25 mg/ml
2,656,321	+				-0.2
2,656,321	+				-0.5
2,656,321	+				-1.2
2,656,321	+				+1.0
2,656,322	-				+2.9
2,656,850	-				-0.8
2,656,861	-				+0.1
2,656,985	+				-1.3
2,656,985	+				+0.9
2,656,986	-				+0.2
2,656,986	-				-0.8
2,657,108	-				-3.2
2,657,172	-				-0.5
2,657,317	-				-1.2
2,657,522	+		Psyr_2287	0.24	-0.7
2,657,523	-		Psyr_2287	0.24	-1.1
2,657,772	+		Psyr_2287	0.54	+0.8
2,657,773	-		Psyr_2287	0.54	-2.3
2,657,976	+		Psyr_2287	0.79	+0.5
2,657,976	+		Psyr_2287	0.79	-0.6
2,657,976	+		Psyr_2287	0.79	-0.6
2,657,976	+		Psyr_2287	0.79	-0.9
2,657,977	-		Psyr_2287	0.79	+0.5
2,657,982	+		Psyr_2287	0.79	-0.0
2,657,982	+		Psyr_2287	0.79	+1.1
2,657,982	+		Psyr_2287	0.79	-0.7
2,657,982	+		Psyr_2287	0.79	+2.4
2,657,982	+		Psyr_2287	0.79	+0.8
2,657,983	-		Psyr_2287	0.79	+0.2
2,657,983	-		Psyr_2287	0.79	+1.5
2,657,983	-		Psyr_2287	0.79	+0.4
2,657,983	-		Psyr_2287	0.79	+0.7
2,657,983	-		Psyr_2287	0.79	+2.4
2,657,983	-		Psyr_2287	0.79	+0.3
2,657,983	-		Psyr_2287	0.79	-1.3
2,657,983	-		Psyr_2287	0.79	+0.7
2,658,015	+		Psyr_2287	0.83	-0.8
2,658,170	+				+0.2
2,658,170	+				-0.3
2,658,216	-				-0.7
2,658,216	-				-0.7
2,658,845	+		Psyr_2288	0.78	-0.7
2,658,845	+		Psyr_2288	0.78	-0.0
2,658,845	+		Psyr_2288	0.78	+0.5
2,658,846	-		Psyr_2288	0.78	-0.9
2,658,846	-		Psyr_2288	0.78	-0.8
2,658,851	+		Psyr_2288	0.79	-0.0
2,658,851	+		Psyr_2288	0.79	+0.2
2,658,851	+		Psyr_2288	0.79	-0.7
2,658,852	-		Psyr_2288	0.79	+0.2
2,658,852	-		Psyr_2288	0.79	-0.1
2,658,911	+		Psyr_2288	0.86	-1.3
2,658,911	+		Psyr_2288	0.86	-0.5
2,658,911	+		Psyr_2288	0.86	+0.1
2,658,911	+		Psyr_2288	0.86	+0.4
2,658,911	+		Psyr_2288	0.86	+0.9
2,658,911	+		Psyr_2288	0.86	-1.5
2,658,911	+		Psyr_2288	0.86	-1.8
2,658,912	-		Psyr_2288	0.86	-0.0
2,658,912	-		Psyr_2288	0.86	-0.5
2,658,912	-		Psyr_2288	0.86	-0.1
2,658,912	-		Psyr_2288	0.86	-0.4
2,658,912	-		Psyr_2288	0.86	+0.8
2,659,079	-		Psyr_2289	0.15	-0.5