Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_1968

Experiment: KB with capsaicin 0.25 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with capsaicin 0.25 mg/ml
2,280,113	+		Psyr_1967	0.61	-0.4
2,280,113	+		Psyr_1967	0.61	+0.5
2,280,114	-		Psyr_1967	0.61	+0.8
2,281,139	+				+0.1
2,281,140	-				-1.1
2,281,140	-				+0.2
2,281,202	+				-0.1
2,281,202	+				+0.5
2,281,395	-		Psyr_1968	0.21	-1.3
2,282,090	+		Psyr_1968	0.71	-1.3
2,282,090	+		Psyr_1968	0.71	-0.2
2,282,091	-		Psyr_1968	0.71	+2.1
2,282,091	-		Psyr_1968	0.71	-2.5
2,282,638	+				-1.1
2,282,638	+				-1.1
2,282,937	+		Psyr_1969	0.22	+0.4
2,283,033	+		Psyr_1969	0.27	-1.8
2,283,034	-		Psyr_1969	0.27	-1.1
2,283,180	+		Psyr_1969	0.34	-2.3
2,283,180	+		Psyr_1969	0.34	+0.2
2,283,180	+		Psyr_1969	0.34	+0.5
2,283,180	+		Psyr_1969	0.34	-0.9
2,283,181	-		Psyr_1969	0.34	+0.5
2,283,231	+		Psyr_1969	0.37	+0.3
2,283,232	-		Psyr_1969	0.37	+1.1
2,283,282	+		Psyr_1969	0.40	-0.0
2,283,282	+		Psyr_1969	0.40	+1.4
2,283,283	-		Psyr_1969	0.40	+0.3
2,283,283	-		Psyr_1969	0.40	+0.1
2,283,345	+		Psyr_1969	0.43	-0.3