Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_0831

Experiment: KB with capsaicin 0.25 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with capsaicin 0.25 mg/ml
940,565	-				-3.2
940,565	-				-0.6
940,565	-				-0.3
940,565	-				+1.0
940,688	+				-2.2
940,689	-				+0.9
940,689	-				+0.9
940,695	+				+0.0
940,696	-				+0.3
940,711	+				-0.7
940,711	+				+0.7
940,712	-				-0.2
940,712	-				-0.2
940,712	-				+1.0
940,763	+				+1.0
940,763	+				+0.7
940,764	-				-1.1
940,802	+				-1.4
940,805	+				-0.3
940,806	-				+2.7
940,957	+				-1.2
940,957	+				-0.3
940,957	+				+0.1
940,957	+				-2.0
940,957	+				+0.6
940,957	+				-0.2
940,957	+				+0.1
940,957	+				-0.7
940,958	-				+1.7
940,958	-				+1.7
940,958	-				-1.3
940,963	+				-0.6
940,963	+				-0.5
940,964	-				+0.3
941,006	+				+0.3
941,006	+				-0.1
941,006	+				+1.0
941,006	+				-0.9
941,006	+				+0.4
941,006	+				-1.3
941,006	+				+0.7
941,006	+				-0.1
941,007	-				+1.1
941,007	-				+0.3
941,033	-				-0.5
941,033	-				-0.2
941,049	+				-0.4
941,049	+				-0.4
941,088	+				+0.1
941,089	-				-0.3
941,103	-				-1.2
941,124	-				+0.7
941,124	-				-0.7
941,132	+				-0.3
941,132	+				+1.7
941,132	+				+1.3
941,132	+				-1.2
941,132	+				-0.3
941,133	-				+0.6
941,133	-				+0.3
941,133	-				-0.2
941,135	-				+0.6
941,135	-				-0.3
941,135	-				-0.5
941,135	-				-0.7
941,234	+				-0.2
941,234	+				+1.1
941,270	-				+0.9
941,321	+				+0.4
941,321	+				+0.3
941,322	-				-0.0
941,322	-				+0.9
941,322	-				+1.9
941,322	-				-0.0
941,544	-		Psyr_0831	0.15	-1.2
941,657	-		Psyr_0831	0.23	-3.1
941,657	-		Psyr_0831	0.23	+0.7
941,676	-		Psyr_0831	0.24	-0.9
941,831	+		Psyr_0831	0.34	-2.1
941,831	+		Psyr_0831	0.34	-1.0
941,832	-		Psyr_0831	0.34	-2.1
942,903	+				-0.9
942,904	-				+0.7
943,170	+		Psyr_0832	0.13	+0.7
943,171	-		Psyr_0832	0.13	-0.0
943,178	+		Psyr_0832	0.14	-0.3
943,178	+		Psyr_0832	0.14	+0.7
943,179	-		Psyr_0832	0.14	+0.7
943,179	-		Psyr_0832	0.14	+0.3
943,216	+		Psyr_0832	0.15	-1.7
943,217	-		Psyr_0832	0.15	-0.9
943,424	-		Psyr_0832	0.22	-2.3