Experiment: L-Arabinose (C); with MOPS
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PFLU_RS04010 and PFLU_RS04015 are separated by 0 nucleotides PFLU_RS04015 and PFLU_RS04020 are separated by 11 nucleotides PFLU_RS04020 and PFLU_RS04025 are separated by 192 nucleotides
PFLU_RS04010: PFLU_RS04010 - phosphoenolpyruvate--protein phosphotransferase, at 905,079 to 907,937
_RS04010
PFLU_RS04015: PFLU_RS04015 - 1-phosphofructokinase, at 907,938 to 908,858
_RS04015
PFLU_RS04020: PFLU_RS04020 - PTS fructose-like transporter subunit IIB, at 908,870 to 910,582
_RS04020
PFLU_RS04025: PFLU_RS04025 - alkaline phosphatase, at 910,775 to 912,316
_RS04025
Position (kb) 908
909
910
911 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 907.922 kb on - strand at 907.935 kb on + strand at 907.935 kb on + strand at 907.935 kb on + strand at 907.935 kb on + strand at 907.935 kb on + strand at 907.935 kb on + strand at 907.936 kb on - strand at 907.936 kb on - strand at 908.213 kb on + strand, within PFLU_RS04015 at 908.213 kb on + strand, within PFLU_RS04015 at 908.214 kb on - strand, within PFLU_RS04015 at 908.214 kb on - strand, within PFLU_RS04015 at 908.607 kb on + strand, within PFLU_RS04015 at 908.607 kb on + strand, within PFLU_RS04015 at 908.607 kb on + strand, within PFLU_RS04015 at 908.608 kb on - strand, within PFLU_RS04015 at 908.642 kb on + strand, within PFLU_RS04015 at 908.856 kb on + strand at 908.856 kb on + strand at 908.856 kb on + strand at 908.856 kb on + strand at 908.856 kb on + strand at 908.856 kb on + strand at 908.856 kb on + strand at 908.856 kb on + strand at 908.856 kb on + strand at 908.857 kb on - strand at 908.857 kb on - strand at 908.857 kb on - strand at 908.857 kb on - strand at 908.857 kb on - strand at 908.857 kb on - strand at 908.857 kb on - strand at 908.857 kb on - strand at 908.857 kb on - strand at 908.857 kb on - strand at 908.857 kb on - strand at 908.857 kb on - strand at 908.877 kb on + strand at 908.877 kb on + strand at 908.878 kb on - strand at 908.888 kb on - strand at 908.968 kb on + strand at 908.969 kb on - strand at 908.969 kb on - strand at 909.073 kb on + strand, within PFLU_RS04020 at 909.073 kb on + strand, within PFLU_RS04020 at 909.074 kb on - strand, within PFLU_RS04020 at 909.074 kb on - strand, within PFLU_RS04020 at 909.144 kb on + strand, within PFLU_RS04020 at 909.145 kb on - strand, within PFLU_RS04020 at 909.176 kb on + strand, within PFLU_RS04020 at 909.176 kb on + strand, within PFLU_RS04020 at 909.176 kb on + strand, within PFLU_RS04020 at 909.176 kb on + strand, within PFLU_RS04020 at 909.176 kb on + strand, within PFLU_RS04020 at 909.176 kb on + strand, within PFLU_RS04020 at 909.176 kb on + strand, within PFLU_RS04020 at 909.176 kb on + strand, within PFLU_RS04020 at 909.176 kb on + strand, within PFLU_RS04020 at 909.176 kb on + strand, within PFLU_RS04020 at 909.176 kb on + strand, within PFLU_RS04020 at 909.176 kb on + strand, within PFLU_RS04020 at 909.176 kb on + strand, within PFLU_RS04020 at 909.176 kb on + strand, within PFLU_RS04020 at 909.177 kb on - strand, within PFLU_RS04020 at 909.177 kb on - strand, within PFLU_RS04020 at 909.177 kb on - strand, within PFLU_RS04020 at 909.177 kb on - strand, within PFLU_RS04020 at 909.177 kb on - strand, within PFLU_RS04020 at 909.177 kb on - strand, within PFLU_RS04020 at 909.177 kb on - strand, within PFLU_RS04020 at 909.177 kb on - strand, within PFLU_RS04020 at 909.177 kb on - strand, within PFLU_RS04020 at 909.177 kb on - strand, within PFLU_RS04020 at 909.177 kb on - strand, within PFLU_RS04020 at 909.302 kb on + strand, within PFLU_RS04020 at 909.303 kb on - strand, within PFLU_RS04020 at 909.343 kb on + strand, within PFLU_RS04020 at 909.343 kb on + strand, within PFLU_RS04020 at 909.440 kb on + strand, within PFLU_RS04020 at 909.563 kb on + strand, within PFLU_RS04020 at 909.563 kb on + strand, within PFLU_RS04020 at 909.564 kb on - strand, within PFLU_RS04020 at 909.564 kb on - strand, within PFLU_RS04020 at 909.565 kb on + strand, within PFLU_RS04020 at 909.565 kb on + strand, within PFLU_RS04020 at 909.566 kb on - strand, within PFLU_RS04020 at 909.566 kb on - strand, within PFLU_RS04020 at 909.566 kb on - strand, within PFLU_RS04020 at 909.743 kb on + strand, within PFLU_RS04020 at 909.743 kb on + strand, within PFLU_RS04020 at 909.839 kb on - strand, within PFLU_RS04020 at 909.958 kb on + strand, within PFLU_RS04020 at 909.977 kb on + strand, within PFLU_RS04020 at 909.977 kb on + strand, within PFLU_RS04020 at 909.977 kb on + strand, within PFLU_RS04020 at 909.977 kb on + strand, within PFLU_RS04020 at 909.978 kb on - strand, within PFLU_RS04020 at 909.978 kb on - strand, within PFLU_RS04020 at 909.978 kb on - strand, within PFLU_RS04020 at 909.978 kb on - strand, within PFLU_RS04020 at 909.978 kb on - strand, within PFLU_RS04020 at 909.978 kb on - strand, within PFLU_RS04020 at 909.978 kb on - strand, within PFLU_RS04020 at 909.978 kb on - strand, within PFLU_RS04020 at 910.059 kb on + strand, within PFLU_RS04020 at 910.060 kb on - strand, within PFLU_RS04020 at 910.125 kb on - strand, within PFLU_RS04020 at 910.143 kb on + strand, within PFLU_RS04020 at 910.300 kb on + strand, within PFLU_RS04020 at 910.300 kb on + strand, within PFLU_RS04020 at 910.300 kb on + strand, within PFLU_RS04020 at 910.300 kb on + strand, within PFLU_RS04020 at 910.300 kb on + strand, within PFLU_RS04020 at 910.301 kb on - strand, within PFLU_RS04020 at 910.301 kb on - strand, within PFLU_RS04020 at 910.301 kb on - strand, within PFLU_RS04020 at 910.301 kb on - strand, within PFLU_RS04020 at 910.301 kb on - strand, within PFLU_RS04020 at 910.301 kb on - strand, within PFLU_RS04020 at 910.301 kb on - strand, within PFLU_RS04020 at 910.301 kb on - strand, within PFLU_RS04020 at 910.301 kb on - strand, within PFLU_RS04020 at 910.301 kb on - strand, within PFLU_RS04020 at 910.397 kb on + strand, within PFLU_RS04020 at 910.397 kb on + strand, within PFLU_RS04020 at 910.397 kb on + strand, within PFLU_RS04020 at 910.397 kb on + strand, within PFLU_RS04020 at 910.397 kb on + strand, within PFLU_RS04020 at 910.397 kb on + strand, within PFLU_RS04020 at 910.398 kb on - strand, within PFLU_RS04020 at 910.398 kb on - strand, within PFLU_RS04020 at 910.398 kb on - strand, within PFLU_RS04020 at 910.398 kb on - strand, within PFLU_RS04020 at 910.398 kb on - strand, within PFLU_RS04020 at 910.398 kb on - strand, within PFLU_RS04020 at 910.398 kb on - strand, within PFLU_RS04020 at 910.398 kb on - strand, within PFLU_RS04020 at 910.398 kb on - strand, within PFLU_RS04020 at 910.434 kb on + strand at 910.434 kb on + strand at 910.434 kb on + strand at 910.434 kb on + strand at 910.434 kb on + strand at 910.435 kb on - strand at 910.435 kb on - strand at 910.435 kb on - strand at 910.435 kb on - strand at 910.435 kb on - strand at 910.435 kb on - strand at 910.435 kb on - strand at 910.435 kb on - strand at 910.435 kb on - strand at 910.435 kb on - strand at 910.435 kb on - strand at 910.478 kb on + strand at 910.478 kb on + strand at 910.478 kb on + strand at 910.478 kb on + strand at 910.478 kb on + strand at 910.478 kb on + strand at 910.479 kb on - strand at 910.479 kb on - strand at 910.523 kb on + strand at 910.523 kb on + strand at 910.523 kb on + strand at 910.523 kb on + strand at 910.523 kb on + strand at 910.523 kb on + strand at 910.524 kb on - strand at 910.524 kb on - strand at 910.524 kb on - strand at 910.524 kb on - strand at 910.524 kb on - strand at 910.524 kb on - strand at 910.524 kb on - strand at 910.524 kb on - strand at 910.524 kb on - strand at 910.551 kb on + strand at 910.551 kb on + strand at 910.552 kb on - strand at 910.643 kb on - strand at 910.740 kb on + strand at 910.740 kb on + strand at 910.741 kb on - strand at 910.741 kb on - strand at 910.757 kb on - strand at 910.899 kb on + strand at 910.899 kb on + strand at 910.900 kb on - strand at 910.900 kb on - strand at 910.900 kb on - strand at 910.968 kb on + strand, within PFLU_RS04025 at 911.261 kb on + strand, within PFLU_RS04025 at 911.261 kb on + strand, within PFLU_RS04025 at 911.261 kb on + strand, within PFLU_RS04025 at 911.261 kb on + strand, within PFLU_RS04025 at 911.261 kb on + strand, within PFLU_RS04025 at 911.261 kb on + strand, within PFLU_RS04025 at 911.261 kb on + strand, within PFLU_RS04025 at 911.261 kb on + strand, within PFLU_RS04025 at 911.261 kb on + strand, within PFLU_RS04025 at 911.261 kb on + strand, within PFLU_RS04025 at 911.262 kb on - strand, within PFLU_RS04025 at 911.262 kb on - strand, within PFLU_RS04025 at 911.318 kb on + strand, within PFLU_RS04025 at 911.318 kb on + strand, within PFLU_RS04025 at 911.318 kb on + strand, within PFLU_RS04025 at 911.318 kb on + strand, within PFLU_RS04025 at 911.319 kb on - strand, within PFLU_RS04025 at 911.319 kb on - strand, within PFLU_RS04025 at 911.319 kb on - strand, within PFLU_RS04025 at 911.377 kb on + strand, within PFLU_RS04025 at 911.377 kb on + strand, within PFLU_RS04025 at 911.377 kb on + strand, within PFLU_RS04025 at 911.377 kb on + strand, within PFLU_RS04025 at 911.377 kb on + strand, within PFLU_RS04025 at 911.378 kb on - strand, within PFLU_RS04025 at 911.378 kb on - strand, within PFLU_RS04025 at 911.378 kb on - strand, within PFLU_RS04025 at 911.423 kb on + strand, within PFLU_RS04025 at 911.424 kb on - strand, within PFLU_RS04025 at 911.435 kb on + strand, within PFLU_RS04025 at 911.435 kb on + strand, within PFLU_RS04025 at 911.435 kb on + strand, within PFLU_RS04025 at 911.435 kb on + strand, within PFLU_RS04025 at 911.435 kb on + strand, within PFLU_RS04025 at 911.435 kb on + strand, within PFLU_RS04025 at 911.436 kb on - strand, within PFLU_RS04025 at 911.441 kb on + strand, within PFLU_RS04025
Per-strain Table
Position Strand Gene LocusTag Fraction L-Arabinose (C); with MOPS remove 907,922 - +0.4 907,935 + -1.7 907,935 + -0.5 907,935 + +0.4 907,935 + -1.9 907,935 + +1.9 907,935 + -0.4 907,936 - +0.1 907,936 - +1.7 908,213 + PFLU_RS04015 0.30 -1.3 908,213 + PFLU_RS04015 0.30 -2.2 908,214 - PFLU_RS04015 0.30 +0.3 908,214 - PFLU_RS04015 0.30 +1.9 908,607 + PFLU_RS04015 0.73 -0.8 908,607 + PFLU_RS04015 0.73 -2.3 908,607 + PFLU_RS04015 0.73 -1.4 908,608 - PFLU_RS04015 0.73 -0.4 908,642 + PFLU_RS04015 0.76 -0.4 908,856 + +1.3 908,856 + +1.0 908,856 + -0.4 908,856 + -1.7 908,856 + -0.1 908,856 + +0.3 908,856 + +0.0 908,856 + +0.4 908,856 + +3.8 908,857 - +0.7 908,857 - -1.0 908,857 - -2.6 908,857 - +0.4 908,857 - +0.4 908,857 - +0.1 908,857 - +1.5 908,857 - +1.2 908,857 - -2.8 908,857 - +1.2 908,857 - -2.9 908,857 - -0.1 908,877 + +1.6 908,877 + -0.7 908,878 - -1.1 908,888 - +0.5 908,968 + +2.2 908,969 - +0.8 908,969 - +1.5 909,073 + PFLU_RS04020 0.12 +0.4 909,073 + PFLU_RS04020 0.12 +1.3 909,074 - PFLU_RS04020 0.12 -1.2 909,074 - PFLU_RS04020 0.12 +2.5 909,144 + PFLU_RS04020 0.16 +1.7 909,145 - PFLU_RS04020 0.16 +0.1 909,176 + PFLU_RS04020 0.18 +2.1 909,176 + PFLU_RS04020 0.18 +0.4 909,176 + PFLU_RS04020 0.18 +2.7 909,176 + PFLU_RS04020 0.18 +2.7 909,176 + PFLU_RS04020 0.18 +3.0 909,176 + PFLU_RS04020 0.18 +2.5 909,176 + PFLU_RS04020 0.18 +3.1 909,176 + PFLU_RS04020 0.18 +1.6 909,176 + PFLU_RS04020 0.18 +1.8 909,176 + PFLU_RS04020 0.18 +0.1 909,176 + PFLU_RS04020 0.18 +1.6 909,176 + PFLU_RS04020 0.18 -2.0 909,176 + PFLU_RS04020 0.18 +2.0 909,176 + PFLU_RS04020 0.18 +2.3 909,177 - PFLU_RS04020 0.18 -0.1 909,177 - PFLU_RS04020 0.18 +0.4 909,177 - PFLU_RS04020 0.18 +2.2 909,177 - PFLU_RS04020 0.18 +2.6 909,177 - PFLU_RS04020 0.18 +1.9 909,177 - PFLU_RS04020 0.18 +1.9 909,177 - PFLU_RS04020 0.18 +2.9 909,177 - PFLU_RS04020 0.18 +2.9 909,177 - PFLU_RS04020 0.18 +1.5 909,177 - PFLU_RS04020 0.18 +2.2 909,177 - PFLU_RS04020 0.18 +2.2 909,302 + PFLU_RS04020 0.25 +2.5 909,303 - PFLU_RS04020 0.25 +2.1 909,343 + PFLU_RS04020 0.28 +2.2 909,343 + PFLU_RS04020 0.28 +0.1 909,440 + PFLU_RS04020 0.33 +1.7 909,563 + PFLU_RS04020 0.40 +1.6 909,563 + PFLU_RS04020 0.40 +0.5 909,564 - PFLU_RS04020 0.41 +2.3 909,564 - PFLU_RS04020 0.41 +0.9 909,565 + PFLU_RS04020 0.41 +2.1 909,565 + PFLU_RS04020 0.41 +1.9 909,566 - PFLU_RS04020 0.41 +2.3 909,566 - PFLU_RS04020 0.41 +2.3 909,566 - PFLU_RS04020 0.41 +2.5 909,743 + PFLU_RS04020 0.51 +1.8 909,743 + PFLU_RS04020 0.51 +2.6 909,839 - PFLU_RS04020 0.57 +1.4 909,958 + PFLU_RS04020 0.64 +2.3 909,977 + PFLU_RS04020 0.65 +2.3 909,977 + PFLU_RS04020 0.65 +1.3 909,977 + PFLU_RS04020 0.65 +1.0 909,977 + PFLU_RS04020 0.65 +2.9 909,978 - PFLU_RS04020 0.65 +0.1 909,978 - PFLU_RS04020 0.65 -1.1 909,978 - PFLU_RS04020 0.65 +1.4 909,978 - PFLU_RS04020 0.65 -1.4 909,978 - PFLU_RS04020 0.65 +1.1 909,978 - PFLU_RS04020 0.65 +1.6 909,978 - PFLU_RS04020 0.65 +1.1 909,978 - PFLU_RS04020 0.65 +2.9 910,059 + PFLU_RS04020 0.69 +1.9 910,060 - PFLU_RS04020 0.69 +1.4 910,125 - PFLU_RS04020 0.73 +2.3 910,143 + PFLU_RS04020 0.74 +2.3 910,300 + PFLU_RS04020 0.83 +1.4 910,300 + PFLU_RS04020 0.83 +1.9 910,300 + PFLU_RS04020 0.83 +1.9 910,300 + PFLU_RS04020 0.83 +0.9 910,300 + PFLU_RS04020 0.83 +1.9 910,301 - PFLU_RS04020 0.84 +0.6 910,301 - PFLU_RS04020 0.84 +2.5 910,301 - PFLU_RS04020 0.84 +2.2 910,301 - PFLU_RS04020 0.84 +2.2 910,301 - PFLU_RS04020 0.84 +2.9 910,301 - PFLU_RS04020 0.84 +1.6 910,301 - PFLU_RS04020 0.84 +1.5 910,301 - PFLU_RS04020 0.84 +2.6 910,301 - PFLU_RS04020 0.84 -0.1 910,301 - PFLU_RS04020 0.84 +3.7 910,397 + PFLU_RS04020 0.89 +2.8 910,397 + PFLU_RS04020 0.89 +3.9 910,397 + PFLU_RS04020 0.89 +1.4 910,397 + PFLU_RS04020 0.89 +2.7 910,397 + PFLU_RS04020 0.89 +1.0 910,397 + PFLU_RS04020 0.89 -1.1 910,398 - PFLU_RS04020 0.89 +2.6 910,398 - PFLU_RS04020 0.89 +0.8 910,398 - PFLU_RS04020 0.89 +1.1 910,398 - PFLU_RS04020 0.89 +1.5 910,398 - PFLU_RS04020 0.89 +0.9 910,398 - PFLU_RS04020 0.89 +0.9 910,398 - PFLU_RS04020 0.89 +2.3 910,398 - PFLU_RS04020 0.89 +1.2 910,398 - PFLU_RS04020 0.89 +2.7 910,434 + +2.6 910,434 + -0.0 910,434 + +2.3 910,434 + +0.9 910,434 + +2.9 910,435 - +2.5 910,435 - -1.6 910,435 - +1.6 910,435 - +2.2 910,435 - -1.7 910,435 - -1.3 910,435 - +1.3 910,435 - +0.6 910,435 - +1.3 910,435 - +1.4 910,435 - +1.5 910,478 + +1.7 910,478 + +2.4 910,478 + +2.1 910,478 + +0.3 910,478 + +2.0 910,478 + +4.0 910,479 - +1.7 910,479 - +1.4 910,523 + +2.9 910,523 + +1.9 910,523 + +1.9 910,523 + +2.8 910,523 + +2.1 910,523 + +3.2 910,524 - -0.8 910,524 - +0.3 910,524 - +0.9 910,524 - +1.9 910,524 - +1.4 910,524 - +1.6 910,524 - +0.6 910,524 - -0.2 910,524 - +1.4 910,551 + +0.7 910,551 + -1.8 910,552 - -0.4 910,643 - -2.6 910,740 + +0.1 910,740 + +0.5 910,741 - +1.8 910,741 - +2.2 910,757 - +0.6 910,899 + +0.2 910,899 + -0.7 910,900 - -1.3 910,900 - +1.3 910,900 - +0.2 910,968 + PFLU_RS04025 0.13 +1.0 911,261 + PFLU_RS04025 0.32 +1.1 911,261 + PFLU_RS04025 0.32 +2.0 911,261 + PFLU_RS04025 0.32 +3.0 911,261 + PFLU_RS04025 0.32 -0.2 911,261 + PFLU_RS04025 0.32 +3.3 911,261 + PFLU_RS04025 0.32 -0.3 911,261 + PFLU_RS04025 0.32 +0.4 911,261 + PFLU_RS04025 0.32 -0.4 911,261 + PFLU_RS04025 0.32 -0.1 911,261 + PFLU_RS04025 0.32 +2.8 911,262 - PFLU_RS04025 0.32 -1.1 911,262 - PFLU_RS04025 0.32 +0.3 911,318 + PFLU_RS04025 0.35 +1.1 911,318 + PFLU_RS04025 0.35 +1.8 911,318 + PFLU_RS04025 0.35 -0.9 911,318 + PFLU_RS04025 0.35 +0.8 911,319 - PFLU_RS04025 0.35 -0.2 911,319 - PFLU_RS04025 0.35 +1.9 911,319 - PFLU_RS04025 0.35 +0.4 911,377 + PFLU_RS04025 0.39 -0.4 911,377 + PFLU_RS04025 0.39 -2.6 911,377 + PFLU_RS04025 0.39 -0.5 911,377 + PFLU_RS04025 0.39 +0.2 911,377 + PFLU_RS04025 0.39 +0.7 911,378 - PFLU_RS04025 0.39 +1.0 911,378 - PFLU_RS04025 0.39 -0.2 911,378 - PFLU_RS04025 0.39 +1.2 911,423 + PFLU_RS04025 0.42 -2.0 911,424 - PFLU_RS04025 0.42 -0.2 911,435 + PFLU_RS04025 0.43 +0.2 911,435 + PFLU_RS04025 0.43 +0.0 911,435 + PFLU_RS04025 0.43 -1.8 911,435 + PFLU_RS04025 0.43 +0.2 911,435 + PFLU_RS04025 0.43 +0.2 911,435 + PFLU_RS04025 0.43 -0.2 911,436 - PFLU_RS04025 0.43 +1.2 911,441 + PFLU_RS04025 0.43 -0.9
Or see this region's nucleotide sequence