Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS00660

Experiment: R2A with Calcium chloride 250 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Calcium chloride 250 mM
139,946	+		LRK54_RS00655	0.75	+0.5
139,946	+		LRK54_RS00655	0.75	-2.0
139,946	+		LRK54_RS00655	0.75	-1.2
139,946	+		LRK54_RS00655	0.75	+0.0
139,946	+		LRK54_RS00655	0.75	+0.2
139,946	+		LRK54_RS00655	0.75	-0.2
139,946	+		LRK54_RS00655	0.75	+1.2
139,946	+		LRK54_RS00655	0.75	+1.8
139,946	+		LRK54_RS00655	0.75	-1.4
139,946	+		LRK54_RS00655	0.75	+1.2
139,946	+		LRK54_RS00655	0.75	-0.2
139,946	+		LRK54_RS00655	0.75	+0.3
139,946	+		LRK54_RS00655	0.75	-2.4
139,946	+		LRK54_RS00655	0.75	-0.6
139,946	+		LRK54_RS00655	0.75	+0.0
139,946	+		LRK54_RS00655	0.75	-0.3
139,947	-		LRK54_RS00655	0.75	-0.5
139,947	-		LRK54_RS00655	0.75	-0.5
139,947	-		LRK54_RS00655	0.75	-1.9
139,947	-		LRK54_RS00655	0.75	+0.0
139,947	-		LRK54_RS00655	0.75	-0.4
139,947	-		LRK54_RS00655	0.75	+1.8
139,947	-		LRK54_RS00655	0.75	+0.4
139,947	-		LRK54_RS00655	0.75	-0.3
139,947	-		LRK54_RS00655	0.75	+0.1
139,947	-		LRK54_RS00655	0.75	+0.8
139,947	-		LRK54_RS00655	0.75	+1.3
139,947	-		LRK54_RS00655	0.75	-0.1
139,947	-		LRK54_RS00655	0.75	-1.0
139,947	-		LRK54_RS00655	0.75	-0.2
139,956	-		LRK54_RS00655	0.75	-0.9
139,994	+		LRK54_RS00655	0.76	-1.1
139,994	+		LRK54_RS00655	0.76	+0.1
139,994	+		LRK54_RS00655	0.76	+0.2
139,994	+		LRK54_RS00655	0.76	-0.9
139,994	+		LRK54_RS00655	0.76	-0.8
139,994	+		LRK54_RS00655	0.76	-0.0
139,994	+		LRK54_RS00655	0.76	-0.0
139,994	+		LRK54_RS00655	0.76	-0.2
139,994	+		LRK54_RS00655	0.76	+1.6
139,994	+		LRK54_RS00655	0.76	+0.1
139,994	+		LRK54_RS00655	0.76	+2.8
139,994	+		LRK54_RS00655	0.76	-1.0
139,994	+		LRK54_RS00655	0.76	+0.6
139,995	-		LRK54_RS00655	0.76	+0.4
139,995	-		LRK54_RS00655	0.76	-1.4
139,995	-		LRK54_RS00655	0.76	+0.2
139,995	-		LRK54_RS00655	0.76	+0.3
139,995	-		LRK54_RS00655	0.76	+0.0
139,995	-		LRK54_RS00655	0.76	-0.2
139,995	-		LRK54_RS00655	0.76	-0.4
139,995	-		LRK54_RS00655	0.76	+2.1
139,995	-		LRK54_RS00655	0.76	-0.8
139,995	-		LRK54_RS00655	0.76	-0.5
139,995	-		LRK54_RS00655	0.76	-0.6
139,995	-		LRK54_RS00655	0.76	+0.5
139,995	-		LRK54_RS00655	0.76	+1.2
140,297	+		LRK54_RS00655	0.85	-0.2
140,297	+		LRK54_RS00655	0.85	+1.0
140,297	+		LRK54_RS00655	0.85	+1.2
140,297	+		LRK54_RS00655	0.85	+0.6
140,297	+		LRK54_RS00655	0.85	-2.4
140,297	+		LRK54_RS00655	0.85	+0.2
140,297	+		LRK54_RS00655	0.85	+1.0
140,297	+		LRK54_RS00655	0.85	+1.1
140,298	-		LRK54_RS00655	0.85	-0.8
140,298	-		LRK54_RS00655	0.85	+1.3
140,558	+				+0.6
140,558	+				+0.2
140,559	-				-0.5
140,559	-				-0.2
140,559	-				-0.8
140,559	-				-0.8
140,567	+				-1.2
140,567	+				-0.3
140,567	+				+0.8
140,567	+				+1.2
140,567	+				-0.6
140,567	+				+0.1
140,567	+				+1.3
140,567	+				+0.5
140,567	+				-0.4
140,567	+				+0.7
140,567	+				-1.5
140,567	+				+0.6
140,567	+				+0.2
140,568	-				-0.8
140,568	-				-0.0
140,568	-				+1.4
140,568	-				+0.1
140,568	-				-0.2
140,568	-				-0.1
140,568	-				-1.0
140,568	-				+0.5
140,568	-				-1.0
140,568	-				-0.5
140,568	-				-0.2
140,568	-				+1.0
140,568	-				+0.4
140,855	+				+0.0
140,856	-				-0.5
140,856	-				-1.0
140,915	+				+0.5
140,915	+				+0.8
140,916	-				+1.4
140,916	-				+1.2
140,951	+				-0.4
140,951	+				-1.7
140,951	+				+1.0
140,951	+				-1.5
140,951	+				-1.3
140,951	+				+0.3
140,951	+				+0.5
140,951	+				-0.4
140,952	-				+0.2
140,952	-				-0.3
140,952	-				+0.4
140,952	-				-1.7
140,952	-				-2.8
140,952	-				-1.0
140,969	+				-0.9
140,969	+				-1.0
140,969	+				-1.2
140,970	-				-0.2
141,098	+		LRK54_RS00660	0.13	+0.8
141,098	+		LRK54_RS00660	0.13	-0.5
141,098	+		LRK54_RS00660	0.13	-1.4
141,098	+		LRK54_RS00660	0.13	+0.8
141,098	+		LRK54_RS00660	0.13	-1.5
141,098	+		LRK54_RS00660	0.13	+0.2
141,098	+		LRK54_RS00660	0.13	-0.2
141,098	+		LRK54_RS00660	0.13	+0.0
141,098	+		LRK54_RS00660	0.13	-1.4
141,098	+		LRK54_RS00660	0.13	+0.7
141,098	+		LRK54_RS00660	0.13	+0.6
141,098	+		LRK54_RS00660	0.13	-1.4
141,098	+		LRK54_RS00660	0.13	+0.1
141,098	+		LRK54_RS00660	0.13	+0.4
141,098	+		LRK54_RS00660	0.13	-0.3
141,098	+		LRK54_RS00660	0.13	+0.8
141,098	+		LRK54_RS00660	0.13	+0.5
141,099	-		LRK54_RS00660	0.13	+0.2
141,099	-		LRK54_RS00660	0.13	-0.8
141,099	-		LRK54_RS00660	0.13	-0.8
141,099	-		LRK54_RS00660	0.13	-0.2
141,099	-		LRK54_RS00660	0.13	+3.1
141,099	-		LRK54_RS00660	0.13	-0.6
141,099	-		LRK54_RS00660	0.13	+0.5
141,099	-		LRK54_RS00660	0.13	+1.2
141,099	-		LRK54_RS00660	0.13	-0.9
141,099	-		LRK54_RS00660	0.13	+0.2
141,099	-		LRK54_RS00660	0.13	-0.8
141,099	-		LRK54_RS00660	0.13	-0.2
141,099	-		LRK54_RS00660	0.13	-0.5
141,099	-		LRK54_RS00660	0.13	+1.3
141,099	-		LRK54_RS00660	0.13	-0.9
141,099	-		LRK54_RS00660	0.13	-0.1
141,099	-		LRK54_RS00660	0.13	-1.2
141,099	-		LRK54_RS00660	0.13	-1.0
141,099	-		LRK54_RS00660	0.13	-1.8
141,099	-		LRK54_RS00660	0.13	+2.4
141,099	-		LRK54_RS00660	0.13	-0.7
141,099	-		LRK54_RS00660	0.13	+0.3
141,099	-		LRK54_RS00660	0.13	-0.5
141,099	-		LRK54_RS00660	0.13	+0.2
141,126	+		LRK54_RS00660	0.15	-0.5
141,126	+		LRK54_RS00660	0.15	+2.8
141,127	-		LRK54_RS00660	0.15	-0.8
141,127	-		LRK54_RS00660	0.15	-0.9
141,266	+		LRK54_RS00660	0.27	-0.3
141,266	+		LRK54_RS00660	0.27	+1.7
141,266	+		LRK54_RS00660	0.27	+0.2
141,266	+		LRK54_RS00660	0.27	-1.3
141,267	-		LRK54_RS00660	0.27	-0.5
141,267	-		LRK54_RS00660	0.27	-1.9
141,402	-		LRK54_RS00660	0.38	-0.8
141,402	-		LRK54_RS00660	0.38	+0.6
141,551	+		LRK54_RS00660	0.51	-0.7
141,551	+		LRK54_RS00660	0.51	-0.5
141,551	+		LRK54_RS00660	0.51	-0.2
141,551	+		LRK54_RS00660	0.51	+0.3
141,551	+		LRK54_RS00660	0.51	-0.0
141,551	+		LRK54_RS00660	0.51	-1.2
141,551	+		LRK54_RS00660	0.51	+0.2
141,551	+		LRK54_RS00660	0.51	+0.8
141,551	+		LRK54_RS00660	0.51	-0.2
141,552	-		LRK54_RS00660	0.51	+1.0
141,552	-		LRK54_RS00660	0.51	-0.6
141,552	-		LRK54_RS00660	0.51	-1.5
141,552	-		LRK54_RS00660	0.51	-0.2
141,552	-		LRK54_RS00660	0.51	+0.8
141,552	-		LRK54_RS00660	0.51	-1.1
141,552	-		LRK54_RS00660	0.51	+1.2
141,552	-		LRK54_RS00660	0.51	-0.6
141,552	-		LRK54_RS00660	0.51	-0.9
141,755	+		LRK54_RS00660	0.68	-2.2
141,755	+		LRK54_RS00660	0.68	-1.0
141,756	-		LRK54_RS00660	0.68	-1.0
141,756	-		LRK54_RS00660	0.68	+2.2
141,756	-		LRK54_RS00660	0.68	-0.8
141,756	-		LRK54_RS00660	0.68	-0.2
141,756	-		LRK54_RS00660	0.68	+0.2
141,866	+		LRK54_RS00660	0.77	-0.2
141,866	+		LRK54_RS00660	0.77	-0.8
141,866	+		LRK54_RS00660	0.77	-1.2
141,866	+		LRK54_RS00660	0.77	-0.5
141,866	+		LRK54_RS00660	0.77	-1.4
141,866	+		LRK54_RS00660	0.77	-1.7
141,866	+		LRK54_RS00660	0.77	+1.4
141,867	-		LRK54_RS00660	0.77	-0.6
141,867	-		LRK54_RS00660	0.77	-0.2
141,867	-		LRK54_RS00660	0.77	-1.4
141,867	-		LRK54_RS00660	0.77	+0.5
141,867	-		LRK54_RS00660	0.77	-1.7
141,867	-		LRK54_RS00660	0.77	-1.9
141,867	-		LRK54_RS00660	0.77	-1.4
141,867	-		LRK54_RS00660	0.77	-1.5
141,941	+		LRK54_RS00660	0.83	+0.2
141,941	+		LRK54_RS00660	0.83	-1.1
141,941	+		LRK54_RS00660	0.83	-0.9
141,941	+		LRK54_RS00660	0.83	+1.1
141,941	+		LRK54_RS00660	0.83	-0.0
141,941	+		LRK54_RS00660	0.83	-1.3
141,941	+		LRK54_RS00660	0.83	+0.4
141,941	+		LRK54_RS00660	0.83	-1.0
141,941	+		LRK54_RS00660	0.83	-0.5
141,941	+		LRK54_RS00660	0.83	-1.4
141,941	+		LRK54_RS00660	0.83	+0.5
141,941	+		LRK54_RS00660	0.83	+0.0
141,941	+		LRK54_RS00660	0.83	+0.8
141,942	-		LRK54_RS00660	0.83	+1.1
141,942	-		LRK54_RS00660	0.83	-0.8
141,942	-		LRK54_RS00660	0.83	+1.0
141,942	-		LRK54_RS00660	0.83	+1.4
141,942	-		LRK54_RS00660	0.83	-1.4
141,942	-		LRK54_RS00660	0.83	-2.1
141,942	-		LRK54_RS00660	0.83	+0.8
141,942	-		LRK54_RS00660	0.83	-1.1
141,942	-		LRK54_RS00660	0.83	+1.4
141,942	-		LRK54_RS00660	0.83	+1.8
141,995	+		LRK54_RS00660	0.88	+0.2
141,995	+		LRK54_RS00660	0.88	-0.7
141,995	+		LRK54_RS00660	0.88	-0.4
141,995	+		LRK54_RS00660	0.88	-0.9
141,995	+		LRK54_RS00660	0.88	+0.8
141,995	+		LRK54_RS00660	0.88	+0.8
141,995	+		LRK54_RS00660	0.88	+1.3
141,995	+		LRK54_RS00660	0.88	+0.7
141,995	+		LRK54_RS00660	0.88	+0.7
141,995	+		LRK54_RS00660	0.88	-0.5
141,995	+		LRK54_RS00660	0.88	-0.1
141,995	+		LRK54_RS00660	0.88	-1.2
141,995	+		LRK54_RS00660	0.88	-0.3
141,995	+		LRK54_RS00660	0.88	-1.4
141,995	+		LRK54_RS00660	0.88	-0.8
141,995	+		LRK54_RS00660	0.88	+0.7
141,995	+		LRK54_RS00660	0.88	-0.1
141,995	+		LRK54_RS00660	0.88	-0.3
141,995	+		LRK54_RS00660	0.88	+2.1
141,995	+		LRK54_RS00660	0.88	-1.2
141,995	+		LRK54_RS00660	0.88	-1.0
141,995	+		LRK54_RS00660	0.88	-1.1
141,995	+		LRK54_RS00660	0.88	+0.0
141,996	-		LRK54_RS00660	0.88	+0.2
141,996	-		LRK54_RS00660	0.88	-0.2
141,996	-		LRK54_RS00660	0.88	-0.8
141,996	-		LRK54_RS00660	0.88	-0.9
141,996	-		LRK54_RS00660	0.88	-1.4
141,996	-		LRK54_RS00660	0.88	-0.0
141,996	-		LRK54_RS00660	0.88	+1.0
141,996	-		LRK54_RS00660	0.88	-0.5
141,996	-		LRK54_RS00660	0.88	-2.3
141,996	-		LRK54_RS00660	0.88	-0.5
141,996	-		LRK54_RS00660	0.88	-1.5
141,996	-		LRK54_RS00660	0.88	-1.0
141,996	-		LRK54_RS00660	0.88	-0.7
141,996	-		LRK54_RS00660	0.88	-1.5
141,996	-		LRK54_RS00660	0.88	-1.0
141,996	-		LRK54_RS00660	0.88	-0.5
141,996	-		LRK54_RS00660	0.88	-1.5
141,996	-		LRK54_RS00660	0.88	-2.5
141,996	-		LRK54_RS00660	0.88	-1.7
141,996	-		LRK54_RS00660	0.88	-0.0
141,996	-		LRK54_RS00660	0.88	-0.6
141,996	-		LRK54_RS00660	0.88	-1.2
141,996	-		LRK54_RS00660	0.88	+3.1
141,996	-		LRK54_RS00660	0.88	-1.7
141,996	-		LRK54_RS00660	0.88	-1.6
141,996	-		LRK54_RS00660	0.88	+0.8
141,996	-		LRK54_RS00660	0.88	-1.0
141,996	-		LRK54_RS00660	0.88	-0.9
141,996	-		LRK54_RS00660	0.88	+0.2
141,996	-		LRK54_RS00660	0.88	-0.7
141,996	-		LRK54_RS00660	0.88	-1.3
141,996	-		LRK54_RS00660	0.88	-0.6
141,996	-		LRK54_RS00660	0.88	+0.3
141,996	-		LRK54_RS00660	0.88	+0.2
141,998	-		LRK54_RS00660	0.88	-0.4
142,013	+		LRK54_RS00660	0.89	-2.5
142,013	+		LRK54_RS00660	0.89	+0.5
142,013	+		LRK54_RS00660	0.89	+1.2
142,014	-		LRK54_RS00660	0.89	-0.2
142,014	-		LRK54_RS00660	0.89	-0.9
142,014	-		LRK54_RS00660	0.89	-0.8
142,014	-		LRK54_RS00660	0.89	-0.8
142,069	+				+0.9
142,069	+				+1.1
142,070	-				+0.8
142,070	-				+1.2
142,215	+				+3.4
142,216	-				+1.2
142,216	-				+0.0
142,378	+		LRK54_RS00665	0.21	+1.2
142,378	+		LRK54_RS00665	0.21	+0.2
142,379	-		LRK54_RS00665	0.21	+1.0
142,379	-		LRK54_RS00665	0.21	-1.5
142,403	+		LRK54_RS00665	0.24	+1.3
142,403	+		LRK54_RS00665	0.24	-0.9
142,403	+		LRK54_RS00665	0.24	+0.1
142,403	+		LRK54_RS00665	0.24	+0.7
142,403	+		LRK54_RS00665	0.24	-1.3
142,404	-		LRK54_RS00665	0.24	-0.3
142,404	-		LRK54_RS00665	0.24	-1.2
142,404	-		LRK54_RS00665	0.24	+0.2
142,404	-		LRK54_RS00665	0.24	-0.3
142,404	-		LRK54_RS00665	0.24	+1.4
142,545	+		LRK54_RS00665	0.42	+0.6
142,545	+		LRK54_RS00665	0.42	-0.3
142,545	+		LRK54_RS00665	0.42	+0.9
142,545	+		LRK54_RS00665	0.42	-2.3
142,545	+		LRK54_RS00665	0.42	-0.2
142,545	+		LRK54_RS00665	0.42	-0.1
142,545	+		LRK54_RS00665	0.42	-0.1
142,545	+		LRK54_RS00665	0.42	-0.1
142,545	+		LRK54_RS00665	0.42	-0.3
142,545	+		LRK54_RS00665	0.42	-0.8
142,545	+		LRK54_RS00665	0.42	+1.2
142,545	+		LRK54_RS00665	0.42	-1.2
142,545	+		LRK54_RS00665	0.42	-0.1
142,545	+		LRK54_RS00665	0.42	+0.0
142,545	+		LRK54_RS00665	0.42	-0.5
142,545	+		LRK54_RS00665	0.42	-0.1
142,546	-		LRK54_RS00665	0.42	+0.4
142,546	-		LRK54_RS00665	0.42	+0.1
142,546	-		LRK54_RS00665	0.42	-0.9
142,546	-		LRK54_RS00665	0.42	+0.5
142,546	-		LRK54_RS00665	0.42	-1.4
142,546	-		LRK54_RS00665	0.42	+0.1
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