Strain Fitness in Pantoea sp. MT58 around IAI47_00710

Experiment: nitrogen source nitrate 5mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrogen source nitrate 5mM
152,044	+				+0.9
152,044	+				+0.8
152,044	+				-1.0
152,044	+				-0.2
152,045	-				+0.1
152,045	-				+0.2
152,091	-				+0.6
152,121	-				+1.3
152,130	+				-0.4
152,130	+				-1.5
152,130	+				-0.8
152,131	-				+0.9
152,131	-				-1.3
152,131	-				-0.4
152,136	+				-0.3
152,136	+				-1.2
152,136	+				+0.0
152,137	-				-0.4
152,137	-				-0.4
152,137	-				-0.8
152,137	-				+1.0
152,137	-				-1.9
152,138	+				-0.5
152,139	-				-0.8
152,139	-				-0.1
152,139	-				-0.5
152,139	-				-0.3
152,139	-				-0.3
152,152	-				-0.3
152,183	+		IAI47_00705	0.10	+1.0
152,184	-		IAI47_00705	0.10	+0.8
152,184	-		IAI47_00705	0.10	-0.7
152,184	-		IAI47_00705	0.10	-0.2
152,184	-		IAI47_00705	0.10	+1.6
152,184	-		IAI47_00705	0.10	-0.7
152,283	+		IAI47_00705	0.21	-1.8
152,283	+		IAI47_00705	0.21	-0.6
152,284	-		IAI47_00705	0.21	+0.1
152,284	-		IAI47_00705	0.21	-1.0
152,310	+		IAI47_00705	0.24	-1.3
152,310	+		IAI47_00705	0.24	-0.7
152,311	-		IAI47_00705	0.24	+0.0
152,311	-		IAI47_00705	0.24	-0.4
152,311	-		IAI47_00705	0.24	-0.5
152,311	-		IAI47_00705	0.24	-1.6
152,311	-		IAI47_00705	0.24	+0.3
152,311	-		IAI47_00705	0.24	-0.4
152,313	+		IAI47_00705	0.25	+0.6
152,330	-		IAI47_00705	0.26	-0.9
152,378	-		IAI47_00705	0.32	-0.4
152,388	+		IAI47_00705	0.33	-0.2
152,389	-		IAI47_00705	0.33	-0.7
152,389	-		IAI47_00705	0.33	-2.4
152,395	-		IAI47_00705	0.34	-2.9
152,395	-		IAI47_00705	0.34	-0.4
152,421	+		IAI47_00705	0.36	+0.2
152,422	-		IAI47_00705	0.37	+0.2
152,422	-		IAI47_00705	0.37	+0.2
152,443	-		IAI47_00705	0.39	+0.2
152,453	+		IAI47_00705	0.40	+0.3
152,453	+		IAI47_00705	0.40	-0.2
152,454	-		IAI47_00705	0.40	-0.0
152,501	+		IAI47_00705	0.45	-1.9
152,501	+		IAI47_00705	0.45	+0.8
152,501	+		IAI47_00705	0.45	+0.6
152,501	+		IAI47_00705	0.45	+1.0
152,501	+		IAI47_00705	0.45	+0.5
152,501	+		IAI47_00705	0.45	-0.3
152,501	+		IAI47_00705	0.45	+1.4
152,501	+		IAI47_00705	0.45	+0.3
152,501	+		IAI47_00705	0.45	-1.4
152,501	+		IAI47_00705	0.45	+0.1
152,501	+		IAI47_00705	0.45	+0.7
152,502	-		IAI47_00705	0.45	+0.0
152,502	-		IAI47_00705	0.45	-0.4
152,502	-		IAI47_00705	0.45	+1.0
152,502	-		IAI47_00705	0.45	-1.3
152,502	-		IAI47_00705	0.45	-0.8
152,504	+		IAI47_00705	0.46	-0.2
152,504	+		IAI47_00705	0.46	+0.1
152,504	+		IAI47_00705	0.46	-1.3
152,505	-		IAI47_00705	0.46	-1.0
152,505	-		IAI47_00705	0.46	-1.1
152,505	-		IAI47_00705	0.46	-0.0
152,573	+		IAI47_00705	0.53	-1.5
152,573	+		IAI47_00705	0.53	-0.4
152,574	-		IAI47_00705	0.53	-0.4
152,574	-		IAI47_00705	0.53	+0.8
152,574	-		IAI47_00705	0.53	-0.0
152,574	-		IAI47_00705	0.53	+0.2
152,574	-		IAI47_00705	0.53	-0.3
152,610	+		IAI47_00705	0.57	-2.8
152,611	-		IAI47_00705	0.57	-0.0
152,611	-		IAI47_00705	0.57	-0.4
152,611	-		IAI47_00705	0.57	+0.4
152,611	-		IAI47_00705	0.57	-1.0
152,696	+		IAI47_00705	0.67	+0.9
152,696	+		IAI47_00705	0.67	-0.4
152,697	-		IAI47_00705	0.67	+1.0
152,697	-		IAI47_00705	0.67	-0.0
152,708	+		IAI47_00705	0.68	+0.9
152,709	-		IAI47_00705	0.68	-0.3
152,709	-		IAI47_00705	0.68	-1.4
152,714	+		IAI47_00705	0.69	+0.2
152,715	-		IAI47_00705	0.69	-2.8
152,803	+		IAI47_00705	0.78	-1.2
152,803	+		IAI47_00705	0.78	-1.1
152,804	-		IAI47_00705	0.78	+1.6
152,804	-		IAI47_00705	0.78	+0.2
152,804	-		IAI47_00705	0.78	+0.6
152,871	+		IAI47_00705	0.86	-0.3
152,871	+		IAI47_00705	0.86	-1.1
152,871	+		IAI47_00705	0.86	+0.7
152,871	+		IAI47_00705	0.86	-1.8
152,871	+		IAI47_00705	0.86	+0.7
152,872	-		IAI47_00705	0.86	-0.8
152,873	+		IAI47_00705	0.86	+0.0
152,873	+		IAI47_00705	0.86	-1.4
152,873	+		IAI47_00705	0.86	+0.3
152,873	+		IAI47_00705	0.86	-2.9
152,874	-		IAI47_00705	0.86	-1.7
152,874	-		IAI47_00705	0.86	+0.8
152,874	-		IAI47_00705	0.86	+0.2
152,874	-		IAI47_00705	0.86	-0.2
152,874	-		IAI47_00705	0.86	-0.5
152,874	-		IAI47_00705	0.86	-0.8
152,874	-		IAI47_00705	0.86	-1.6
152,943	-				+0.1
152,953	-				+1.0
152,986	+				+0.1
152,995	-				+0.2
153,032	-				-1.0
153,032	-				-0.4
153,032	-				-0.8
153,032	-				-0.8
153,051	+				+0.8
153,051	+				-1.2
153,051	+				+0.5
153,052	-				+0.4
153,052	-				-1.7
153,052	-				-1.0
153,052	-				-1.3
153,052	-				-2.6
153,052	-				+0.4
153,052	-				-1.0
153,066	+				-0.2
153,066	+				+1.3
153,066	+				-1.4
153,066	+				-1.4
153,066	+				-0.7
153,066	+				-1.4
153,066	+				-0.6
153,067	-				+2.0
153,067	-				-0.4
153,067	-				+0.1
153,067	-				-1.1
153,067	-				-0.2
153,067	-				+0.1
153,067	-				+0.2
153,067	-				+0.1
153,067	-				-0.9
153,077	+				+3.7
153,077	+				+0.1
153,077	+				-0.8
153,078	-				-1.1
153,078	-				-0.2
153,113	+				+0.7
153,114	-				-0.8
153,161	+		IAI47_00710	0.14	-0.4
153,161	+		IAI47_00710	0.14	-0.7
153,161	+		IAI47_00710	0.14	-1.4
153,161	+		IAI47_00710	0.14	-0.7
153,162	-		IAI47_00710	0.14	+0.7
153,162	-		IAI47_00710	0.14	-1.0
153,162	-		IAI47_00710	0.14	-0.1
153,162	-		IAI47_00710	0.14	+0.2
153,162	-		IAI47_00710	0.14	-2.1
153,162	-		IAI47_00710	0.14	+0.6
153,171	+		IAI47_00710	0.14	-0.0
153,172	-		IAI47_00710	0.15	-2.6
153,172	-		IAI47_00710	0.15	-0.5
153,236	+		IAI47_00710	0.20	-0.8
153,236	+		IAI47_00710	0.20	+0.0
153,236	+		IAI47_00710	0.20	-1.7
153,237	-		IAI47_00710	0.20	-1.1
153,247	+		IAI47_00710	0.21	-0.7
153,248	-		IAI47_00710	0.21	-0.2
153,307	+		IAI47_00710	0.26	-0.5
153,307	+		IAI47_00710	0.26	+0.3
153,308	-		IAI47_00710	0.26	+0.7
153,308	-		IAI47_00710	0.26	-1.5
153,313	+		IAI47_00710	0.26	-2.0
153,313	+		IAI47_00710	0.26	-0.3
153,313	+		IAI47_00710	0.26	-1.0
153,313	+		IAI47_00710	0.26	+0.7
153,314	-		IAI47_00710	0.26	-2.2
153,314	-		IAI47_00710	0.26	-0.8
153,314	-		IAI47_00710	0.26	+1.3
153,331	-		IAI47_00710	0.27	-1.2
153,365	+		IAI47_00710	0.30	-0.0
153,365	+		IAI47_00710	0.30	-0.4
153,365	+		IAI47_00710	0.30	-1.3
153,365	+		IAI47_00710	0.30	+0.3
153,366	-		IAI47_00710	0.30	+0.4
153,506	-		IAI47_00710	0.42	-1.2
153,506	-		IAI47_00710	0.42	+0.8
153,506	-		IAI47_00710	0.42	-1.1
153,511	+		IAI47_00710	0.42	-0.8
153,511	+		IAI47_00710	0.42	-0.3
153,511	+		IAI47_00710	0.42	-0.9
153,511	+		IAI47_00710	0.42	-2.9
153,511	+		IAI47_00710	0.42	+0.8
153,511	+		IAI47_00710	0.42	-1.5
153,511	+		IAI47_00710	0.42	+0.4
153,511	+		IAI47_00710	0.42	-0.5
153,512	-		IAI47_00710	0.42	+0.7
153,512	-		IAI47_00710	0.42	-0.4
153,515	+		IAI47_00710	0.42	+0.6
153,515	+		IAI47_00710	0.42	-0.7
153,515	+		IAI47_00710	0.42	+1.0
153,516	-		IAI47_00710	0.43	-3.4
153,516	-		IAI47_00710	0.43	-2.0
153,516	-		IAI47_00710	0.43	-2.1
153,516	-		IAI47_00710	0.43	+0.9
153,516	-		IAI47_00710	0.43	-0.3
153,516	-		IAI47_00710	0.43	+0.6
153,518	+		IAI47_00710	0.43	-0.4
153,518	+		IAI47_00710	0.43	-1.2
153,518	+		IAI47_00710	0.43	-0.6
153,518	+		IAI47_00710	0.43	-0.5
153,519	-		IAI47_00710	0.43	-0.3
153,519	-		IAI47_00710	0.43	+1.2
153,566	-		IAI47_00710	0.47	+0.3
153,578	+		IAI47_00710	0.48	-1.3
153,578	+		IAI47_00710	0.48	-0.3
153,579	-		IAI47_00710	0.48	-0.8
153,616	+		IAI47_00710	0.51	+0.4
153,622	+		IAI47_00710	0.51	-0.6
153,622	+		IAI47_00710	0.51	-0.6
153,622	+		IAI47_00710	0.51	-0.1
153,622	+		IAI47_00710	0.51	+0.2
153,622	+		IAI47_00710	0.51	-1.0
153,622	+		IAI47_00710	0.51	-1.8
153,622	+		IAI47_00710	0.51	+0.8
153,623	-		IAI47_00710	0.51	-0.3
153,623	-		IAI47_00710	0.51	+0.2
153,623	-		IAI47_00710	0.51	-2.8
153,623	-		IAI47_00710	0.51	-2.9
153,623	-		IAI47_00710	0.51	-1.3
153,623	-		IAI47_00710	0.51	-1.5
153,623	-		IAI47_00710	0.51	-0.7
153,623	-		IAI47_00710	0.51	+0.3
153,632	-		IAI47_00710	0.52	-0.5
153,665	+		IAI47_00710	0.55	+0.4
153,665	+		IAI47_00710	0.55	-0.2
153,665	+		IAI47_00710	0.55	-0.6
153,665	+		IAI47_00710	0.55	+0.6
153,666	-		IAI47_00710	0.55	-0.4
153,666	-		IAI47_00710	0.55	-0.2
153,676	+		IAI47_00710	0.56	-0.0
153,676	+		IAI47_00710	0.56	-1.2
153,677	-		IAI47_00710	0.56	+0.6
153,677	-		IAI47_00710	0.56	-1.1
153,677	-		IAI47_00710	0.56	-2.7
153,677	-		IAI47_00710	0.56	-0.1
153,677	-		IAI47_00710	0.56	-2.1
153,677	-		IAI47_00710	0.56	-0.3
153,718	+		IAI47_00710	0.59	-1.0
153,718	+		IAI47_00710	0.59	-0.2
153,719	-		IAI47_00710	0.59	-0.9
153,757	+		IAI47_00710	0.62	+1.2
153,804	+		IAI47_00710	0.66	+2.2
153,804	+		IAI47_00710	0.66	-1.3
153,804	+		IAI47_00710	0.66	+0.3
153,805	-		IAI47_00710	0.66	-0.6
153,805	-		IAI47_00710	0.66	-0.1
153,833	-		IAI47_00710	0.68	+0.1
153,840	+		IAI47_00710	0.69	-0.2
153,840	+		IAI47_00710	0.69	-0.5
153,840	+		IAI47_00710	0.69	-0.6
153,840	+		IAI47_00710	0.69	-0.0
153,840	+		IAI47_00710	0.69	-0.2
153,841	-		IAI47_00710	0.69	-1.4
153,841	-		IAI47_00710	0.69	+1.4
153,841	-		IAI47_00710	0.69	-0.7
153,892	+		IAI47_00710	0.73	-0.5
153,893	-		IAI47_00710	0.73	-1.3
153,898	+		IAI47_00710	0.74	-1.0
153,913	+		IAI47_00710	0.75	-0.2
153,914	-		IAI47_00710	0.75	-0.1
153,914	-		IAI47_00710	0.75	+0.3
153,914	-		IAI47_00710	0.75	-0.5
153,923	-		IAI47_00710	0.76	-0.3
153,923	-		IAI47_00710	0.76	-1.8
153,986	-		IAI47_00710	0.81	-0.1
154,022	-		IAI47_00710	0.84	-1.3
154,037	-		IAI47_00710	0.85	-1.4
154,086	+		IAI47_00710	0.89	+0.8
154,086	+		IAI47_00710	0.89	-0.1
154,086	+		IAI47_00710	0.89	-2.0
154,086	+		IAI47_00710	0.89	-0.8
154,086	+		IAI47_00710	0.89	-0.0
154,086	+		IAI47_00710	0.89	-0.2
154,086	+		IAI47_00710	0.89	-3.3
154,086	+		IAI47_00710	0.89	+0.7
154,086	+		IAI47_00710	0.89	+0.1
154,086	+		IAI47_00710	0.89	-0.6
154,087	-		IAI47_00710	0.89	-1.3
154,087	-		IAI47_00710	0.89	-0.2
154,087	-		IAI47_00710	0.89	-1.4
154,087	-		IAI47_00710	0.89	+0.0
154,095	+		IAI47_00710	0.90	+0.8
154,095	+		IAI47_00710	0.90	-1.5
154,096	-		IAI47_00710	0.90	-0.4
154,096	-		IAI47_00710	0.90	-0.7
154,108	+				-0.5
154,108	+				-1.0
154,108	+				-0.8
154,108	+				-0.3
154,108	+				-1.8
154,108	+				-1.9
154,109	-				-0.8
154,109	-				-0.8
154,111	+				-1.8
154,112	-				-0.4
154,112	-				+0.6
154,133	-				-0.5
154,211	-				-0.1
154,211	-				-0.3
154,211	-				-3.4
154,211	-				+0.2
154,213	+				-0.6
154,213	+				+0.7
154,213	+				-0.7
154,214	-				+2.2
154,214	-				-0.4
154,214	-				-0.8
154,226	+				-0.3
154,226	+				-2.2
154,226	+				-0.6
154,226	+				-1.2
154,226	+				-0.0
154,226	+				-1.7
154,226	+				-0.8
154,227	-				-0.8
154,227	-				+1.5
154,227	-				-0.2
154,249	+				+0.0
154,267	+				-0.3
154,267	+				-0.3
154,267	+				-0.4
154,268	-				-0.2
154,268	-				+0.2
154,268	-				+0.4
154,268	-				+0.6
154,268	-				-2.1
154,268	-				-1.5
154,269	+				-1.2
154,269	+				-0.5
154,269	+				-0.4
154,269	+				+0.0
154,270	-				-0.5
154,270	-				-0.8
154,270	-				+0.5
154,273	-				+0.2
154,273	-				+0.5
154,273	-				+0.1
154,285	+				-0.5
154,285	+				+0.4
154,285	+				+0.3
154,285	+				-1.3
154,285	+				+0.6
154,286	-				-1.9
154,286	-				+0.4
154,286	-				+0.3
154,296	+				+0.2
154,296	+				-0.3
154,297	-				-0.2
154,297	-				-1.2
154,297	-				-0.7
154,309	+				-0.1
154,309	+				-0.2
154,309	+				+1.4
154,309	+				+0.0
154,309	+				-0.5
154,309	+				+3.4
154,310	-				-0.2
154,310	-				+1.1
154,349	+				+0.8
154,349	+				+0.4
154,350	-				-0.5
154,350	-				+0.6
154,364	+				+1.2
154,364	+				-1.2
154,364	+				+0.8
154,364	+				+0.4
154,364	+				+0.6
154,365	-				-0.6
154,365	-				+1.5
154,433	+		IAI47_00715	0.12	-1.3
154,433	+		IAI47_00715	0.12	+0.9
154,433	+		IAI47_00715	0.12	+0.5
154,433	+		IAI47_00715	0.12	+0.5
154,433	+		IAI47_00715	0.12	+1.3
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