Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_3708

Experiment: Nalidixic 0.05 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.05 mg/ml
3,821,861	+		Ga0059261_3706	0.36	-0.8
3,821,861	+		Ga0059261_3706	0.36	-0.5
3,821,861	+		Ga0059261_3706	0.36	+0.5
3,821,861	+		Ga0059261_3706	0.36	+1.2
3,821,861	+		Ga0059261_3706	0.36	+0.5
3,821,862	-		Ga0059261_3706	0.36	+0.6
3,821,862	-		Ga0059261_3706	0.36	-0.3
3,821,862	-		Ga0059261_3706	0.36	-0.2
3,821,862	-		Ga0059261_3706	0.36	-1.2
3,822,199	+		Ga0059261_3707	0.12	-0.2
3,822,316	+		Ga0059261_3707	0.29	-0.8
3,822,316	+		Ga0059261_3707	0.29	-0.2
3,822,317	-		Ga0059261_3707	0.29	+0.1
3,822,317	-		Ga0059261_3707	0.29	+0.7
3,822,317	-		Ga0059261_3707	0.29	+0.1
3,822,317	-		Ga0059261_3707	0.29	-1.3
3,822,317	-		Ga0059261_3707	0.29	-0.2
3,822,402	+		Ga0059261_3707	0.42	+0.1
3,822,403	-		Ga0059261_3707	0.42	-0.3
3,822,537	-		Ga0059261_3707	0.61	-0.2
3,822,537	-		Ga0059261_3707	0.61	-0.1
3,822,562	+		Ga0059261_3707	0.65	+0.8
3,822,563	-		Ga0059261_3707	0.65	-1.5
3,822,563	-		Ga0059261_3707	0.65	+0.8
3,822,563	-		Ga0059261_3707	0.65	-0.5
3,822,563	-		Ga0059261_3707	0.65	+0.6
3,822,563	-				-0.8
3,822,845	+				+0.0
3,822,845	+				+0.6
3,822,845	+				-0.0
3,822,845	+				+0.2
3,822,846	-				-0.4
3,822,846	-				-0.7
3,822,846	-				-1.8
3,822,846	-				-0.3
3,822,846	-				-1.1
3,822,884	+				-0.1
3,822,946	+		Ga0059261_3708	0.21	-0.2
3,822,946	+		Ga0059261_3708	0.21	+1.2
3,822,947	-		Ga0059261_3708	0.22	+0.8
3,822,977	+		Ga0059261_3708	0.28	-0.2
3,822,977	+		Ga0059261_3708	0.28	+0.3
3,822,977	+		Ga0059261_3708	0.28	+1.5
3,822,977	+		Ga0059261_3708	0.28	+0.5
3,822,977	+		Ga0059261_3708	0.28	-0.5
3,822,977	+		Ga0059261_3708	0.28	+1.2
3,822,978	-		Ga0059261_3708	0.28	+0.0
3,822,978	-		Ga0059261_3708	0.28	-0.5
3,823,007	+		Ga0059261_3708	0.34	+0.3
3,823,008	-		Ga0059261_3708	0.34	-1.1
3,823,387	+				+0.6
3,823,387	+				+0.2
3,823,456	-				-0.3
3,823,608	+				+0.2
3,823,609	-				+1.4
3,823,873	-		Ga0059261_3709	0.36	+0.3
3,823,873	-		Ga0059261_3709	0.36	+0.1
3,823,908	+		Ga0059261_3709	0.40	-1.0
3,823,908	+		Ga0059261_3709	0.40	+0.3
3,823,945	-		Ga0059261_3709	0.43	+0.1
3,823,945	-		Ga0059261_3709	0.43	+0.8
3,823,945	-		Ga0059261_3709	0.43	-0.1
3,824,013	+		Ga0059261_3709	0.50	+0.1
3,824,013	+		Ga0059261_3709	0.50	-0.8
3,824,014	-		Ga0059261_3709	0.50	+0.3
3,824,028	+		Ga0059261_3709	0.52	+0.2
3,824,028	+		Ga0059261_3709	0.52	+0.7
3,824,028	+		Ga0059261_3709	0.52	-0.7
3,824,028	+		Ga0059261_3709	0.52	+0.0
3,824,029	-		Ga0059261_3709	0.52	-0.2
3,824,029	-		Ga0059261_3709	0.52	-0.6
3,824,031	+		Ga0059261_3709	0.52	+0.0
3,824,031	+		Ga0059261_3709	0.52	-0.1
3,824,031	+		Ga0059261_3709	0.52	-0.2
3,824,031	+		Ga0059261_3709	0.52	+1.4
3,824,031	+		Ga0059261_3709	0.52	-1.0
3,824,032	-		Ga0059261_3709	0.52	+1.0
3,824,032	-		Ga0059261_3709	0.52	-0.0
3,824,032	-		Ga0059261_3709	0.52	-0.8
3,824,115	+		Ga0059261_3709	0.61	-1.5
3,824,115	+		Ga0059261_3709	0.61	-0.8
3,824,115	+		Ga0059261_3709	0.61	-0.5
3,824,116	-		Ga0059261_3709	0.61	+0.5
3,824,116	-				-0.2
3,824,116	-		Ga0059261_3709	0.61	+0.6
3,824,116	-		Ga0059261_3709	0.61	+0.6
3,824,116	-		Ga0059261_3709	0.61	+0.2
3,824,116	-		Ga0059261_3709	0.61	+0.2
3,824,116	-		Ga0059261_3709	0.61	-0.4
3,824,121	+		Ga0059261_3709	0.61	-0.3
3,824,121	+		Ga0059261_3709	0.61	+0.6
3,824,121	+		Ga0059261_3709	0.61	-0.5
3,824,121	+		Ga0059261_3709	0.61	+0.1
3,824,122	-		Ga0059261_3709	0.61	-0.4
3,824,122	-		Ga0059261_3709	0.61	+2.7
3,824,122	-				-0.2
3,824,122	-		Ga0059261_3709	0.61	+0.1
3,824,122	-		Ga0059261_3709	0.61	-0.1
3,824,139	+		Ga0059261_3709	0.63	+0.6
3,824,140	-		Ga0059261_3709	0.63	+0.3
3,824,142	+		Ga0059261_3709	0.63	-1.2
3,824,142	+		Ga0059261_3709	0.63	-0.1
3,824,142	+		Ga0059261_3709	0.63	+0.5
3,824,142	+		Ga0059261_3709	0.63	-0.7
3,824,143	-		Ga0059261_3709	0.64	-0.1
3,824,143	-		Ga0059261_3709	0.64	-0.3
3,824,143	-		Ga0059261_3709	0.64	-1.3
3,824,143	-		Ga0059261_3709	0.64	-0.2
3,824,143	-		Ga0059261_3709	0.64	+0.1
3,824,143	-		Ga0059261_3709	0.64	-0.4
3,824,143	-		Ga0059261_3709	0.64	+0.6
3,824,184	+		Ga0059261_3709	0.68	-0.4
3,824,184	+		Ga0059261_3709	0.68	-0.9
3,824,184	+		Ga0059261_3709	0.68	+1.1
3,824,184	+		Ga0059261_3709	0.68	-0.5
3,824,199	+		Ga0059261_3709	0.69	+0.2
3,824,214	+		Ga0059261_3709	0.71	+0.4
3,824,214	+		Ga0059261_3709	0.71	+0.1
3,824,214	+		Ga0059261_3709	0.71	+0.1
3,824,214	+		Ga0059261_3709	0.71	-0.7
3,824,214	+		Ga0059261_3709	0.71	-0.4
3,824,215	-		Ga0059261_3709	0.71	-0.1
3,824,215	-		Ga0059261_3709	0.71	+0.1
3,824,250	+		Ga0059261_3709	0.75	+0.1
3,824,250	+		Ga0059261_3709	0.75	+1.0
3,824,251	-		Ga0059261_3709	0.75	-0.0
3,824,268	+		Ga0059261_3709	0.76	+0.0
3,824,296	+		Ga0059261_3709	0.79	+0.2
3,824,296	+				-1.5
3,824,296	+		Ga0059261_3709	0.79	+1.0
3,824,296	+		Ga0059261_3709	0.79	-0.7
3,824,297	-		Ga0059261_3709	0.79	-0.1
3,824,297	-		Ga0059261_3709	0.79	+0.1
3,824,297	-		Ga0059261_3709	0.79	-0.9
3,824,297	-		Ga0059261_3709	0.79	-0.1
3,824,297	-		Ga0059261_3709	0.79	+0.3
3,824,297	-		Ga0059261_3709	0.79	+0.1
3,824,297	-				-0.8
3,824,297	-		Ga0059261_3709	0.79	+0.0
3,824,323	-		Ga0059261_3709	0.82	+0.7
3,824,325	+		Ga0059261_3709	0.82	-0.5
3,824,325	+		Ga0059261_3709	0.82	-0.5
3,824,325	+		Ga0059261_3709	0.82	+0.8
3,824,326	-		Ga0059261_3709	0.82	+0.0