Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_3669

Experiment: Nalidixic 0.05 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.05 mg/ml
3,781,197	+		Ga0059261_3667	0.80	-0.1
3,781,197	+		Ga0059261_3667	0.80	+1.2
3,781,197	+		Ga0059261_3667	0.80	+0.2
3,781,197	+		Ga0059261_3667	0.80	-0.2
3,781,197	+		Ga0059261_3667	0.80	-0.6
3,781,197	+				+0.8
3,781,197	+		Ga0059261_3667	0.80	-0.7
3,781,197	+		Ga0059261_3667	0.80	+0.4
3,781,197	+		Ga0059261_3667	0.80	-0.6
3,781,197	+		Ga0059261_3667	0.80	-0.2
3,781,197	+		Ga0059261_3667	0.80	-0.4
3,781,197	+		Ga0059261_3667	0.80	-0.2
3,781,197	+		Ga0059261_3667	0.80	-0.6
3,781,198	-				-0.5
3,781,198	-		Ga0059261_3667	0.80	-0.8
3,781,198	-		Ga0059261_3667	0.80	-0.6
3,781,198	-		Ga0059261_3667	0.80	+0.1
3,781,198	-		Ga0059261_3667	0.80	+0.2
3,781,198	-		Ga0059261_3667	0.80	-0.2
3,781,198	-		Ga0059261_3667	0.80	+1.3
3,781,198	-		Ga0059261_3667	0.80	-0.7
3,781,198	-		Ga0059261_3667	0.80	-1.5
3,781,198	-		Ga0059261_3667	0.80	+0.0
3,781,198	-		Ga0059261_3667	0.80	+1.3
3,781,234	+		Ga0059261_3667	0.85	+0.3
3,781,234	+		Ga0059261_3667	0.85	+0.2
3,781,235	-		Ga0059261_3667	0.86	+0.1
3,781,235	-		Ga0059261_3667	0.86	-0.3
3,781,561	+		Ga0059261_3668	0.39	+0.1
3,781,561	+				-0.2
3,781,562	-		Ga0059261_3668	0.39	+2.4
3,781,562	-		Ga0059261_3668	0.39	-0.7
3,781,562	-		Ga0059261_3668	0.39	-0.3
3,781,562	-		Ga0059261_3668	0.39	+0.6
3,781,562	-		Ga0059261_3668	0.39	+0.3
3,781,562	-		Ga0059261_3668	0.39	-0.2
3,781,562	-		Ga0059261_3668	0.39	-0.0
3,781,619	-		Ga0059261_3668	0.49	+0.2
3,781,619	-				+3.4
3,781,917	+				+1.6
3,781,927	+				-0.1
3,781,927	+				-0.5
3,781,927	+				-0.0
3,781,928	-				+0.3
3,781,940	+				+0.2
3,781,940	+				-0.4
3,781,940	+				+0.0
3,781,940	+				+2.0
3,781,940	+				+0.5
3,781,940	+				-0.3
3,781,940	+				-0.4
3,781,940	+				-1.1
3,781,940	+				+0.1
3,781,940	+				-1.5
3,781,941	-				-0.9
3,781,941	-				-0.6
3,781,941	-				-0.1
3,781,941	-				+0.2
3,781,941	-				-0.3
3,781,941	-				+0.1
3,781,941	-				-0.4
3,781,942	+				+0.8
3,781,942	+				+0.0
3,781,942	+				+0.0
3,781,942	+				-0.0
3,781,942	+				+0.3
3,781,942	+				+0.3
3,781,943	-				-1.8
3,781,943	-				-0.2
3,781,943	-				-0.1
3,782,016	+				-0.1
3,782,016	+				+1.1
3,782,016	+				+0.2
3,782,016	+				-0.2
3,782,017	-				+0.7
3,782,017	-				+0.4
3,782,127	+		Ga0059261_3669	0.16	+0.2
3,782,128	-		Ga0059261_3669	0.16	+1.2
3,782,172	+		Ga0059261_3669	0.20	-0.3
3,782,173	-		Ga0059261_3669	0.20	-0.2
3,782,173	-		Ga0059261_3669	0.20	-0.3
3,782,200	-		Ga0059261_3669	0.22	+0.8
3,782,200	-		Ga0059261_3669	0.22	-0.1
3,782,388	+		Ga0059261_3669	0.37	+0.5
3,782,389	-		Ga0059261_3669	0.37	+0.4
3,782,391	+		Ga0059261_3669	0.37	-0.2
3,782,391	+		Ga0059261_3669	0.37	+0.6
3,782,391	+		Ga0059261_3669	0.37	+0.8
3,782,391	+		Ga0059261_3669	0.37	-0.3
3,782,391	+		Ga0059261_3669	0.37	-0.3
3,782,391	+		Ga0059261_3669	0.37	+0.1
3,782,391	+		Ga0059261_3669	0.37	+0.6
3,782,391	+		Ga0059261_3669	0.37	-0.4
3,782,392	-		Ga0059261_3669	0.37	+0.6
3,782,392	-		Ga0059261_3669	0.37	+0.1
3,782,392	-		Ga0059261_3669	0.37	+0.4
3,782,522	+		Ga0059261_3669	0.47	-0.6
3,782,532	+		Ga0059261_3669	0.48	+1.8
3,782,532	+		Ga0059261_3669	0.48	+0.4
3,782,532	+		Ga0059261_3669	0.48	-0.3
3,782,533	-		Ga0059261_3669	0.48	-0.0
3,782,533	-		Ga0059261_3669	0.48	+0.8
3,782,533	-		Ga0059261_3669	0.48	+0.2
3,782,533	-		Ga0059261_3669	0.48	-0.3
3,782,533	-		Ga0059261_3669	0.48	+0.7
3,782,533	-		Ga0059261_3669	0.48	+0.1
3,782,577	+		Ga0059261_3669	0.51	+0.5
3,782,577	+		Ga0059261_3669	0.51	-0.3
3,782,578	-		Ga0059261_3669	0.51	+2.0
3,782,584	+		Ga0059261_3669	0.52	-0.1
3,782,585	-		Ga0059261_3669	0.52	-2.2
3,782,592	+		Ga0059261_3669	0.52	+0.2
3,782,598	+		Ga0059261_3669	0.53	+0.2
3,782,599	-		Ga0059261_3669	0.53	+0.4
3,782,599	-		Ga0059261_3669	0.53	-0.5
3,782,599	-		Ga0059261_3669	0.53	+0.6
3,782,599	-		Ga0059261_3669	0.53	+0.4
3,782,599	-		Ga0059261_3669	0.53	+0.7
3,782,905	+		Ga0059261_3669	0.76	-0.2
3,783,020	+		Ga0059261_3669	0.85	+0.1
3,783,030	+		Ga0059261_3669	0.86	+0.4
3,783,031	-		Ga0059261_3669	0.86	+0.4
3,783,200	+				-0.3
3,783,200	+				+0.4
3,783,200	+				-0.1
3,783,200	+				-0.1
3,783,200	+				-0.8
3,783,201	-				-0.6
3,783,201	-				+0.8
3,783,278	+		Ga0059261_3670	0.43	+0.3
3,783,278	+		Ga0059261_3670	0.43	-0.6
3,783,279	-		Ga0059261_3670	0.45	+0.2
3,783,279	-		Ga0059261_3670	0.45	-0.2
3,783,300	+		Ga0059261_3670	0.73	+0.4
3,783,300	+		Ga0059261_3670	0.73	-0.0
3,783,301	-		Ga0059261_3670	0.74	-1.5
3,783,301	-		Ga0059261_3670	0.74	+0.2
3,783,301	-		Ga0059261_3670	0.74	+0.1
3,783,311	+				+1.4
3,783,311	+		Ga0059261_3670	0.88	-0.3
3,783,311	+		Ga0059261_3670	0.88	-0.9
3,783,312	-				-1.4
3,783,312	-				-1.2
3,783,312	-				+0.3
3,783,312	-				-0.3
3,783,312	-				-1.5
3,783,337	+				+0.2
3,783,337	+				+0.4
3,783,338	-				+0.2
3,783,338	-				-0.2
3,783,803	+		Ga0059261_3671	0.46	+1.1
3,783,803	+				+0.2
3,783,804	-				+1.8
3,783,903	-				+0.8
3,783,903	-				-0.8
3,783,914	+		Ga0059261_3671	0.59	+0.5
3,784,020	-				-0.2
3,784,049	-		Ga0059261_3671	0.75	+0.1
3,784,087	+		Ga0059261_3671	0.79	-0.2
3,784,087	+				+0.8
3,784,087	+		Ga0059261_3671	0.79	-0.2
3,784,088	-		Ga0059261_3671	0.80	-0.8