Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_3621

Experiment: Nalidixic 0.05 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.05 mg/ml
3,738,819	-		Ga0059261_3620	0.29	-0.4
3,738,819	-		Ga0059261_3620	0.29	-0.5
3,738,819	-		Ga0059261_3620	0.29	-0.7
3,739,200	-		Ga0059261_3620	0.67	-2.0
3,739,200	-				+0.8
3,739,434	-				-0.0
3,739,434	-				-0.2
3,739,469	-				+1.2
3,739,533	-				-1.2
3,739,533	-				-0.5
3,739,541	-				-0.5
3,739,541	-				-0.7
3,739,541	-				+2.4
3,739,541	-				-0.2
3,739,574	+				+0.6
3,739,825	+		Ga0059261_3621	0.12	+1.4
3,739,826	-		Ga0059261_3621	0.12	+0.6
3,739,906	-		Ga0059261_3621	0.16	-1.2
3,739,906	-		Ga0059261_3621	0.16	+0.1
3,740,338	+		Ga0059261_3621	0.38	-0.2
3,740,339	-		Ga0059261_3621	0.38	-0.3
3,740,469	+		Ga0059261_3621	0.45	+0.1
3,740,470	-		Ga0059261_3621	0.45	+0.0
3,740,470	-		Ga0059261_3621	0.45	-0.1
3,740,470	-		Ga0059261_3621	0.45	+1.3
3,740,470	-		Ga0059261_3621	0.45	-0.0
3,741,013	+		Ga0059261_3621	0.72	-0.8
3,741,013	+		Ga0059261_3621	0.72	-0.8
3,741,013	+		Ga0059261_3621	0.72	-0.2
3,741,013	+		Ga0059261_3621	0.72	-0.3
3,741,013	+		Ga0059261_3621	0.72	+0.1
3,741,013	+		Ga0059261_3621	0.72	-0.3
3,741,013	+		Ga0059261_3621	0.72	-0.2
3,741,013	+				+0.4
3,741,014	-		Ga0059261_3621	0.72	+0.2
3,741,014	-				+0.8
3,741,014	-		Ga0059261_3621	0.72	+1.1
3,741,014	-		Ga0059261_3621	0.72	+0.8
3,741,014	-		Ga0059261_3621	0.72	+0.5
3,741,014	-		Ga0059261_3621	0.72	-0.3
3,741,014	-		Ga0059261_3621	0.72	+0.7
3,741,014	-		Ga0059261_3621	0.72	+0.3
3,741,295	+		Ga0059261_3621	0.86	+0.2
3,741,296	-		Ga0059261_3621	0.86	+1.0
3,741,300	+		Ga0059261_3621	0.87	+1.2
3,741,301	-		Ga0059261_3621	0.87	+0.5
3,741,301	-		Ga0059261_3621	0.87	+0.6
3,741,324	+		Ga0059261_3621	0.88	+1.6
3,741,324	+		Ga0059261_3621	0.88	-0.8
3,741,324	+		Ga0059261_3621	0.88	+0.5
3,741,325	-		Ga0059261_3621	0.88	-0.2
3,741,325	-		Ga0059261_3621	0.88	-0.3
3,741,325	-		Ga0059261_3621	0.88	-1.0
3,741,495	+				+0.5
3,741,495	+				-0.2
3,741,495	+				+0.1
3,741,495	+				+0.2
3,741,496	-				+0.2
3,741,496	-				-0.8
3,741,496	-				+0.1
3,741,504	+				-0.8
3,741,504	+				+1.6
3,741,504	+				-0.2
3,741,505	-				-0.3
3,741,505	-				-0.5
3,741,505	-				-0.0
3,741,603	-		Ga0059261_3622	0.10	-0.6
3,741,603	-		Ga0059261_3622	0.10	-0.2
3,741,776	+		Ga0059261_3622	0.50	+0.8
3,741,776	+		Ga0059261_3622	0.50	+0.7
3,741,776	+		Ga0059261_3622	0.50	-0.2
3,741,777	-		Ga0059261_3622	0.51	+0.4
3,741,777	-		Ga0059261_3622	0.51	+0.5
3,741,777	-		Ga0059261_3622	0.51	+0.4
3,741,812	+		Ga0059261_3622	0.59	+0.2
3,741,813	-		Ga0059261_3622	0.59	-0.2
3,741,813	-		Ga0059261_3622	0.59	+0.1
3,741,813	-		Ga0059261_3622	0.59	-0.6
3,741,813	-		Ga0059261_3622	0.59	+0.9
3,741,820	+		Ga0059261_3622	0.61	-0.4
3,741,949	+				+0.5
3,741,949	+				-1.1
3,742,319	+				-1.2
3,742,319	+		Ga0059261_3623	0.34	-0.1
3,742,319	+		Ga0059261_3623	0.34	+0.5
3,742,320	-		Ga0059261_3623	0.34	+0.1
3,742,320	-		Ga0059261_3623	0.34	+1.2
3,742,320	-		Ga0059261_3623	0.34	+1.4
3,742,320	-		Ga0059261_3623	0.34	-0.5
3,742,320	-		Ga0059261_3623	0.34	+0.4
3,742,320	-		Ga0059261_3623	0.34	+0.9
3,742,320	-		Ga0059261_3623	0.34	-0.4
3,742,320	-		Ga0059261_3623	0.34	-0.7
3,742,321	+		Ga0059261_3623	0.34	-1.1
3,742,322	-		Ga0059261_3623	0.34	+0.5
3,742,322	-		Ga0059261_3623	0.34	+1.2
3,742,322	-		Ga0059261_3623	0.34	-0.2
3,742,495	+		Ga0059261_3623	0.54	-0.6
3,742,495	+		Ga0059261_3623	0.54	+0.7
3,742,495	+		Ga0059261_3623	0.54	-0.0
3,742,495	+		Ga0059261_3623	0.54	+1.0
3,742,496	-		Ga0059261_3623	0.54	+1.3
3,742,496	-		Ga0059261_3623	0.54	-0.4
3,742,550	+		Ga0059261_3623	0.60	+1.2
3,742,550	+		Ga0059261_3623	0.60	+0.1
3,742,550	+		Ga0059261_3623	0.60	-0.0
3,742,551	-		Ga0059261_3623	0.60	-0.4
3,742,551	-		Ga0059261_3623	0.60	-0.1