Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_3386

Experiment: Nalidixic 0.05 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.05 mg/ml
3,515,838	+				+0.8
3,515,839	-				-0.4
3,516,374	-				+0.4
3,516,374	-				+0.4
3,516,401	+				-0.1
3,516,402	-				-0.3
3,516,472	+				+0.7
3,516,507	+				-0.3
3,516,507	+				-0.1
3,516,512	+				+0.8
3,516,512	+				-0.4
3,516,512	+				-1.7
3,516,512	+				-0.5
3,516,512	+				-0.2
3,516,512	+				+1.4
3,516,512	+				-0.4
3,516,512	+				-0.3
3,516,513	-				+0.2
3,516,513	-				-1.7
3,516,513	-				+0.6
3,516,513	-				-0.4
3,516,513	-				-1.3
3,516,513	-				-0.2
3,516,513	-				+0.3
3,516,513	-				+0.5
3,516,513	-				-0.5
3,516,735	+		Ga0059261_3386	0.12	+0.2
3,516,735	+		Ga0059261_3386	0.12	+0.8
3,516,735	+		Ga0059261_3386	0.12	+0.6
3,516,735	+		Ga0059261_3386	0.12	-0.9
3,516,735	+		Ga0059261_3386	0.12	+0.4
3,516,735	+		Ga0059261_3386	0.12	+0.3
3,516,735	+		Ga0059261_3386	0.12	+0.4
3,516,735	+		Ga0059261_3386	0.12	-1.1
3,516,735	+		Ga0059261_3386	0.12	-0.0
3,516,736	-		Ga0059261_3386	0.12	-1.2
3,516,736	-		Ga0059261_3386	0.12	+1.4
3,516,736	-		Ga0059261_3386	0.12	-0.7
3,516,736	-		Ga0059261_3386	0.12	+1.0
3,516,736	-		Ga0059261_3386	0.12	-0.4
3,516,736	-		Ga0059261_3386	0.12	-0.7
3,516,736	-		Ga0059261_3386	0.12	+0.4
3,516,736	-		Ga0059261_3386	0.12	-0.2
3,516,738	+		Ga0059261_3386	0.12	+0.6
3,516,738	+		Ga0059261_3386	0.12	-0.1
3,516,739	-		Ga0059261_3386	0.12	+0.4
3,516,750	+		Ga0059261_3386	0.13	-0.1
3,516,750	+		Ga0059261_3386	0.13	-1.5
3,516,750	+		Ga0059261_3386	0.13	+0.6
3,516,750	+		Ga0059261_3386	0.13	+0.1
3,516,750	+		Ga0059261_3386	0.13	+0.9
3,516,750	+		Ga0059261_3386	0.13	-0.1
3,516,750	+		Ga0059261_3386	0.13	-0.5
3,516,751	-		Ga0059261_3386	0.13	-0.2
3,516,751	-		Ga0059261_3386	0.13	-0.3
3,516,751	-		Ga0059261_3386	0.13	-0.6
3,516,751	-		Ga0059261_3386	0.13	+1.5
3,516,752	+		Ga0059261_3386	0.13	-0.8
3,516,753	-		Ga0059261_3386	0.13	+0.1
3,516,753	-		Ga0059261_3386	0.13	+0.6
3,516,843	+		Ga0059261_3386	0.18	+0.5
3,516,843	+		Ga0059261_3386	0.18	-0.8
3,516,843	+		Ga0059261_3386	0.18	-0.8
3,516,844	-		Ga0059261_3386	0.18	-0.0
3,516,844	-		Ga0059261_3386	0.18	-0.7
3,516,844	-		Ga0059261_3386	0.18	-0.2
3,516,844	-		Ga0059261_3386	0.18	+2.4
3,516,872	+		Ga0059261_3386	0.20	+0.3
3,516,872	+		Ga0059261_3386	0.20	-0.3
3,516,872	+		Ga0059261_3386	0.20	+0.2
3,516,872	+		Ga0059261_3386	0.20	+0.4
3,516,872	+		Ga0059261_3386	0.20	+0.3
3,516,873	-		Ga0059261_3386	0.20	+0.1
3,516,873	-		Ga0059261_3386	0.20	+0.4
3,516,915	+				-0.8
3,516,915	+		Ga0059261_3386	0.22	-0.6
3,516,916	-				+2.1
3,516,916	-		Ga0059261_3386	0.22	-0.1
3,516,916	-		Ga0059261_3386	0.22	-0.0
3,516,916	-		Ga0059261_3386	0.22	+0.3
3,516,916	-		Ga0059261_3386	0.22	+0.1
3,516,954	+		Ga0059261_3386	0.24	-0.1
3,516,955	-		Ga0059261_3386	0.24	-0.4
3,517,008	+		Ga0059261_3386	0.27	+0.2
3,517,008	+		Ga0059261_3386	0.27	+0.1
3,517,009	-		Ga0059261_3386	0.27	-0.1
3,517,035	+		Ga0059261_3386	0.29	+0.8
3,517,038	+		Ga0059261_3386	0.29	+0.3
3,517,038	+		Ga0059261_3386	0.29	-0.2
3,517,038	+		Ga0059261_3386	0.29	+0.3
3,517,038	+		Ga0059261_3386	0.29	+0.1
3,517,039	-				+0.2
3,517,039	-		Ga0059261_3386	0.29	-0.4
3,517,039	-		Ga0059261_3386	0.29	-0.0
3,517,039	-		Ga0059261_3386	0.29	-0.0
3,517,039	-				-1.2
3,517,050	+		Ga0059261_3386	0.30	+0.0
3,517,050	+		Ga0059261_3386	0.30	+0.9
3,517,050	+		Ga0059261_3386	0.30	+0.3
3,517,050	+		Ga0059261_3386	0.30	+1.1
3,517,050	+		Ga0059261_3386	0.30	-0.3
3,517,050	+		Ga0059261_3386	0.30	-0.8
3,517,050	+		Ga0059261_3386	0.30	-0.1
3,517,051	-		Ga0059261_3386	0.30	-0.2
3,517,051	-		Ga0059261_3386	0.30	-0.3
3,517,051	-		Ga0059261_3386	0.30	-0.5
3,517,051	-		Ga0059261_3386	0.30	-0.4
3,517,051	-		Ga0059261_3386	0.30	-0.6
3,517,051	-		Ga0059261_3386	0.30	-0.4
3,517,051	-		Ga0059261_3386	0.30	-0.9
3,517,179	+		Ga0059261_3386	0.37	-0.4
3,517,180	-		Ga0059261_3386	0.37	-0.3
3,517,180	-		Ga0059261_3386	0.37	-0.7
3,517,245	+		Ga0059261_3386	0.40	-1.0
3,517,245	+		Ga0059261_3386	0.40	-0.2
3,517,246	-		Ga0059261_3386	0.40	+0.1
3,517,314	+		Ga0059261_3386	0.44	+0.6
3,517,314	+		Ga0059261_3386	0.44	-1.0
3,517,314	+		Ga0059261_3386	0.44	-0.9
3,517,315	-		Ga0059261_3386	0.44	+1.1
3,517,315	-		Ga0059261_3386	0.44	-1.7
3,517,374	+		Ga0059261_3386	0.47	-1.2
3,517,374	+		Ga0059261_3386	0.47	-0.5
3,517,374	+		Ga0059261_3386	0.47	+0.1
3,517,374	+		Ga0059261_3386	0.47	-0.5
3,517,374	+		Ga0059261_3386	0.47	+0.1
3,517,374	+		Ga0059261_3386	0.47	-0.4
3,517,374	+		Ga0059261_3386	0.47	-0.2
3,517,375	-		Ga0059261_3386	0.47	+0.1
3,517,375	-		Ga0059261_3386	0.47	-0.0
3,517,375	-		Ga0059261_3386	0.47	+0.3
3,517,375	-		Ga0059261_3386	0.47	-1.8
3,517,380	+		Ga0059261_3386	0.48	-1.8
3,517,380	+		Ga0059261_3386	0.48	+0.2
3,517,380	+		Ga0059261_3386	0.48	+0.3
3,517,380	+		Ga0059261_3386	0.48	-0.4
3,517,381	-		Ga0059261_3386	0.48	+2.6
3,517,381	-		Ga0059261_3386	0.48	-0.6
3,517,381	-		Ga0059261_3386	0.48	-0.6
3,517,381	-		Ga0059261_3386	0.48	-1.3
3,517,422	+		Ga0059261_3386	0.50	+0.5
3,517,422	+		Ga0059261_3386	0.50	+0.6
3,517,422	+		Ga0059261_3386	0.50	+0.1
3,517,422	+		Ga0059261_3386	0.50	+0.2
3,517,422	+		Ga0059261_3386	0.50	+0.6
3,517,422	+		Ga0059261_3386	0.50	-1.3
3,517,423	-		Ga0059261_3386	0.50	-0.2
3,517,423	-		Ga0059261_3386	0.50	-0.5
3,517,423	-		Ga0059261_3386	0.50	-0.4
3,517,423	-		Ga0059261_3386	0.50	+0.2
3,517,423	-		Ga0059261_3386	0.50	-0.1
3,517,423	-		Ga0059261_3386	0.50	+1.5
3,517,423	-		Ga0059261_3386	0.50	-0.8
3,517,423	-		Ga0059261_3386	0.50	-0.6
3,517,423	-		Ga0059261_3386	0.50	-0.6
3,517,423	-		Ga0059261_3386	0.50	+0.1
3,517,423	-		Ga0059261_3386	0.50	-0.8
3,517,423	-		Ga0059261_3386	0.50	-0.2
3,517,423	-		Ga0059261_3386	0.50	-0.6
3,517,457	+		Ga0059261_3386	0.52	-0.9
3,517,457	+		Ga0059261_3386	0.52	+0.5
3,517,458	-		Ga0059261_3386	0.52	+0.1
3,517,458	-				-1.2
3,517,584	+		Ga0059261_3386	0.59	-0.3
3,517,584	+		Ga0059261_3386	0.59	+0.1
3,517,584	+		Ga0059261_3386	0.59	+1.3
3,517,584	+		Ga0059261_3386	0.59	+1.3
3,517,584	+		Ga0059261_3386	0.59	+0.3
3,517,585	-		Ga0059261_3386	0.59	+0.8
3,517,585	-		Ga0059261_3386	0.59	+0.2
3,517,585	-		Ga0059261_3386	0.59	-1.4
3,517,707	+		Ga0059261_3386	0.66	+0.0
3,517,707	+		Ga0059261_3386	0.66	-0.3
3,517,707	+		Ga0059261_3386	0.66	+0.3
3,517,707	+				-1.5
3,517,707	+		Ga0059261_3386	0.66	+0.3
3,517,707	+		Ga0059261_3386	0.66	-0.5
3,517,707	+		Ga0059261_3386	0.66	-0.9
3,517,707	+		Ga0059261_3386	0.66	+0.9
3,517,707	+		Ga0059261_3386	0.66	-1.0
3,517,707	+		Ga0059261_3386	0.66	+1.8
3,517,707	+		Ga0059261_3386	0.66	-0.2
3,517,707	+		Ga0059261_3386	0.66	-0.4
3,517,707	+		Ga0059261_3386	0.66	+0.3
3,517,707	+		Ga0059261_3386	0.66	-0.2
3,517,707	+		Ga0059261_3386	0.66	-0.7
3,517,707	+		Ga0059261_3386	0.66	+0.6
3,517,707	+		Ga0059261_3386	0.66	-0.0
3,517,708	-		Ga0059261_3386	0.66	+1.4
3,517,708	-		Ga0059261_3386	0.66	-0.4
3,517,708	-		Ga0059261_3386	0.66	+0.1
3,517,708	-		Ga0059261_3386	0.66	-0.4
3,517,708	-		Ga0059261_3386	0.66	+0.8
3,517,708	-		Ga0059261_3386	0.66	+0.3
3,517,708	-		Ga0059261_3386	0.66	-0.3
3,517,708	-		Ga0059261_3386	0.66	-0.2
3,517,708	-		Ga0059261_3386	0.66	+0.2
3,517,708	-		Ga0059261_3386	0.66	+0.3
3,517,708	-		Ga0059261_3386	0.66	-0.0
3,517,708	-		Ga0059261_3386	0.66	-1.4
3,517,708	-		Ga0059261_3386	0.66	-0.2
3,517,708	-		Ga0059261_3386	0.66	+0.7
3,517,708	-		Ga0059261_3386	0.66	+0.1
3,517,752	+		Ga0059261_3386	0.68	+0.1
3,517,752	+		Ga0059261_3386	0.68	+0.4
3,517,753	-		Ga0059261_3386	0.68	-0.1
3,517,753	-		Ga0059261_3386	0.68	-0.0
3,517,753	-		Ga0059261_3386	0.68	-0.2
3,517,779	+		Ga0059261_3386	0.70	+0.2
3,517,779	+		Ga0059261_3386	0.70	+0.4
3,517,779	+		Ga0059261_3386	0.70	-0.8
3,517,779	+		Ga0059261_3386	0.70	+1.3
3,517,779	+		Ga0059261_3386	0.70	-0.3
3,517,780	-		Ga0059261_3386	0.70	-0.1
3,517,781	+		Ga0059261_3386	0.70	-0.8
3,517,781	+		Ga0059261_3386	0.70	-0.8
3,517,781	+		Ga0059261_3386	0.70	+0.8
3,517,781	+		Ga0059261_3386	0.70	+0.9
3,517,782	-		Ga0059261_3386	0.70	+0.0
3,517,782	-		Ga0059261_3386	0.70	-0.2
3,517,803	+		Ga0059261_3386	0.71	+1.3
3,517,803	+		Ga0059261_3386	0.71	+0.3
3,517,803	+		Ga0059261_3386	0.71	-1.3
3,517,804	-		Ga0059261_3386	0.71	+0.5
3,517,923	+		Ga0059261_3386	0.78	+0.1
3,517,923	+		Ga0059261_3386	0.78	+0.2
3,517,923	+		Ga0059261_3386	0.78	+0.4
3,517,924	-		Ga0059261_3386	0.78	-0.6
3,517,938	+		Ga0059261_3386	0.79	-0.5
3,517,938	+		Ga0059261_3386	0.79	-0.4
3,517,938	+		Ga0059261_3386	0.79	-0.8
3,517,938	+		Ga0059261_3386	0.79	-0.2
3,517,938	+		Ga0059261_3386	0.79	-0.6
3,517,939	-		Ga0059261_3386	0.79	-0.8
3,517,939	-		Ga0059261_3386	0.79	+0.6
3,517,969	-		Ga0059261_3386	0.80	-0.4
3,517,969	-		Ga0059261_3386	0.80	-0.3
3,518,073	+		Ga0059261_3386	0.86	-0.3
3,518,073	+		Ga0059261_3386	0.86	-0.0
3,518,073	+		Ga0059261_3386	0.86	+0.3
3,518,074	-		Ga0059261_3386	0.86	-1.3
3,518,074	-		Ga0059261_3386	0.86	-0.7
3,518,074	-		Ga0059261_3386	0.86	-0.1
3,518,074	-		Ga0059261_3386	0.86	+0.2
3,518,074	-		Ga0059261_3386	0.86	-0.1
3,518,074	-		Ga0059261_3386	0.86	+1.1
3,518,074	-		Ga0059261_3386	0.86	+0.3
3,518,075	+		Ga0059261_3386	0.86	-0.4
3,518,075	+		Ga0059261_3386	0.86	-0.5
3,518,075	+		Ga0059261_3386	0.86	-0.6
3,518,075	+		Ga0059261_3386	0.86	+0.3
3,518,075	+		Ga0059261_3386	0.86	-0.9
3,518,075	+		Ga0059261_3386	0.86	-0.3
3,518,075	+		Ga0059261_3386	0.86	+0.1
3,518,076	-		Ga0059261_3386	0.86	+0.5
3,518,076	-		Ga0059261_3386	0.86	+0.4
3,518,076	-		Ga0059261_3386	0.86	+0.2
3,518,076	-		Ga0059261_3386	0.86	-0.3
3,518,076	-		Ga0059261_3386	0.86	+0.3
3,518,076	-		Ga0059261_3386	0.86	-1.4
3,518,076	-				+2.8
3,518,076	-		Ga0059261_3386	0.86	+0.5
3,518,076	-		Ga0059261_3386	0.86	-0.5
3,518,076	-		Ga0059261_3386	0.86	-0.1
3,518,076	-		Ga0059261_3386	0.86	+0.5
3,518,076	-		Ga0059261_3386	0.86	+1.4
3,518,076	-		Ga0059261_3386	0.86	-0.2
3,518,076	-		Ga0059261_3386	0.86	-1.5
3,518,076	-		Ga0059261_3386	0.86	+0.2
3,518,130	+		Ga0059261_3386	0.89	+0.1
3,518,130	+		Ga0059261_3386	0.89	+0.1
3,518,130	+		Ga0059261_3386	0.89	+0.2
3,518,130	+		Ga0059261_3386	0.89	-0.8
3,518,130	+		Ga0059261_3386	0.89	-0.2
3,518,131	-		Ga0059261_3386	0.89	-0.9
3,518,131	-		Ga0059261_3386	0.89	-0.1
3,518,131	-		Ga0059261_3386	0.89	+0.8
3,518,132	+		Ga0059261_3386	0.89	-0.0
3,518,132	+		Ga0059261_3386	0.89	-0.0
3,518,133	-		Ga0059261_3386	0.89	-0.9
3,518,160	+				+0.5
3,518,160	+				-0.2
3,518,161	-				-1.2
3,518,161	-				-0.1
3,518,161	-				-0.4
3,518,334	-				-0.2
3,518,358	-				-0.6
3,518,358	-				+0.4
3,518,369	+				-0.6
3,518,370	-				-0.7
3,518,370	-				+0.1
3,518,371	+				+0.1
3,518,371	+				+0.6
3,518,372	-				-0.2
3,518,372	-				-0.0
3,518,372	-				+0.5
3,518,373	+				-0.5
3,518,374	-				-0.1
3,518,374	-				-1.9
3,518,374	-				-0.6
3,518,378	+				-0.3
3,518,378	+				+1.1
3,518,379	-				+0.6
3,518,440	+		Ga0059261_3387	0.11	+0.3
3,518,452	-		Ga0059261_3387	0.13	-0.5
3,518,504	+		Ga0059261_3387	0.21	+0.7
3,518,534	+		Ga0059261_3387	0.25	-1.1
3,518,535	-		Ga0059261_3387	0.25	+0.5
3,518,593	+		Ga0059261_3387	0.34	-0.9
3,518,594	-		Ga0059261_3387	0.34	-0.2
3,518,669	+		Ga0059261_3387	0.46	+0.3
3,518,702	+		Ga0059261_3387	0.51	-0.1
3,518,772	-		Ga0059261_3387	0.61	-2.7
3,518,772	-		Ga0059261_3387	0.61	-0.5
3,518,820	+		Ga0059261_3387	0.68	-0.4
3,518,820	+		Ga0059261_3387	0.68	+0.6
3,518,822	+		Ga0059261_3387	0.69	-0.5
3,518,822	+		Ga0059261_3387	0.69	+0.4
3,518,823	-		Ga0059261_3387	0.69	-0.4
3,518,823	-		Ga0059261_3387	0.69	+0.7
3,518,862	+		Ga0059261_3387	0.75	-1.0
3,518,863	-		Ga0059261_3387	0.75	+0.5
3,518,937	+		Ga0059261_3387	0.86	-0.7
3,518,938	-		Ga0059261_3387	0.86	+0.1
3,518,938	-		Ga0059261_3387	0.86	+0.3
3,518,947	+		Ga0059261_3387	0.88	-0.9
3,519,022	+				-0.0
3,519,022	+				+0.8
3,519,023	-				+0.0
3,519,023	-				-0.4
3,519,074	+				-0.4
3,519,074	+				-0.5
3,519,074	+				-0.7
3,519,075	-				+0.2
3,519,075	-				+0.1
3,519,079	+				+0.9
3,519,080	-				+0.0
3,519,080	-				-0.1
3,519,080	-				-0.3
3,519,096	+				+1.5
3,519,096	+				+0.1
3,519,096	+				-1.1
3,519,096	+				-0.2
3,519,096	+				+0.1
3,519,097	-				+0.5
3,519,097	-				+0.9
3,519,097	-				-0.6
3,519,103	+				-1.1
3,519,103	+				-0.3
3,519,193	+				-0.3
3,519,238	+				-0.3
3,519,238	+				-0.2
3,519,238	+				-0.6
3,519,238	+				-0.2
3,519,238	+				+0.1
3,519,238	+				-0.4
3,519,239	-				-0.1
3,519,239	-				+2.1
3,519,239	-				+0.8
3,519,239	-				-0.6
3,519,239	-				-0.2
3,519,308	+		Ga0059261_3388	0.14	-0.3
3,519,309	-		Ga0059261_3388	0.14	-0.8
3,519,309	-		Ga0059261_3388	0.14	+0.3
3,519,326	-				-0.8
3,519,326	-		Ga0059261_3388	0.16	+1.5