Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_3052

Experiment: Nalidixic 0.05 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.05 mg/ml
3,189,291	+		Ga0059261_3051	0.49	+0.7
3,189,291	+		Ga0059261_3051	0.49	-0.0
3,189,292	-		Ga0059261_3051	0.50	+0.1
3,189,469	+		Ga0059261_3051	0.73	-0.0
3,189,469	+		Ga0059261_3051	0.73	-0.1
3,189,469	+		Ga0059261_3051	0.73	-0.3
3,189,469	+		Ga0059261_3051	0.73	+0.2
3,189,469	+		Ga0059261_3051	0.73	-1.1
3,189,469	+		Ga0059261_3051	0.73	+0.1
3,189,470	-		Ga0059261_3051	0.73	+0.2
3,189,470	-		Ga0059261_3051	0.73	+0.5
3,189,470	-		Ga0059261_3051	0.73	-0.3
3,189,470	-		Ga0059261_3051	0.73	-0.5
3,189,470	-		Ga0059261_3051	0.73	+0.2
3,189,472	+		Ga0059261_3051	0.74	-0.3
3,189,472	+		Ga0059261_3051	0.74	-0.4
3,189,472	+		Ga0059261_3051	0.74	-0.5
3,189,472	+		Ga0059261_3051	0.74	-0.6
3,189,473	-		Ga0059261_3051	0.74	-1.0
3,189,473	-		Ga0059261_3051	0.74	-0.2
3,189,473	-		Ga0059261_3051	0.74	+0.1
3,189,473	-		Ga0059261_3051	0.74	-0.2
3,189,493	+		Ga0059261_3051	0.76	-0.2
3,189,494	-		Ga0059261_3051	0.77	-0.0
3,189,494	-		Ga0059261_3051	0.77	+0.8
3,189,494	-		Ga0059261_3051	0.77	-0.6
3,189,494	-		Ga0059261_3051	0.77	-0.7
3,189,559	+		Ga0059261_3051	0.85	+0.8
3,189,559	+		Ga0059261_3051	0.85	+0.1
3,189,559	+		Ga0059261_3051	0.85	+0.1
3,189,560	-		Ga0059261_3051	0.85	-0.1
3,189,574	-		Ga0059261_3051	0.87	-0.2
3,189,653	+				-0.2
3,189,801	-				+0.7
3,189,845	+				+0.6
3,189,845	+				+0.8
3,189,846	-				-0.2
3,189,975	+				+1.1
3,189,975	+				-1.2
3,189,976	-				+0.4
3,190,041	+				+0.3
3,190,041	+				+0.0
3,190,041	+				+0.5
3,190,042	-				-1.4
3,190,042	-				+0.1
3,190,042	-				-1.0
3,190,042	-				+2.1
3,190,042	-				-0.1
3,190,043	+				-1.8
3,190,044	-				+0.8
3,190,044	-				+1.3
3,190,044	-				+0.3
3,190,044	-				-0.8
3,190,053	+				+0.8
3,190,053	+				+0.2
3,190,053	+				+0.5
3,190,053	+				+0.4
3,190,053	+				-0.3
3,190,054	-				+0.8
3,190,400	-		Ga0059261_3052	0.47	+0.9
3,190,495	+		Ga0059261_3052	0.62	-2.0
3,190,495	+		Ga0059261_3052	0.62	-0.1
3,190,496	-		Ga0059261_3052	0.63	+0.6
3,190,496	-		Ga0059261_3052	0.63	+0.8
3,190,589	+		Ga0059261_3052	0.78	+1.3
3,190,589	+		Ga0059261_3052	0.78	-0.4
3,190,589	+		Ga0059261_3052	0.78	-0.1
3,190,589	+		Ga0059261_3052	0.78	+0.2
3,190,590	-		Ga0059261_3052	0.78	+0.9
3,190,590	-		Ga0059261_3052	0.78	-0.4
3,190,590	-		Ga0059261_3052	0.78	+0.8
3,190,590	-		Ga0059261_3052	0.78	+0.5
3,190,590	-		Ga0059261_3052	0.78	+0.2
3,190,590	-				-0.8
3,190,723	+				+0.6
3,190,766	+				-0.2
3,190,766	+				+0.6
3,190,766	+				-0.2
3,190,767	-				+0.7
3,190,851	+				-0.2
3,190,851	+				+0.1
3,190,851	+				+0.8
3,190,851	+				+0.7
3,190,851	+				-0.1
3,190,851	+				-0.1
3,190,852	-				-0.4
3,190,852	-				-1.5
3,190,852	-				+0.2
3,190,909	+				-0.0
3,190,909	+				+0.9
3,190,910	-				+1.2
3,190,932	+				-0.2
3,190,932	+				+0.2
3,190,983	+				+0.3
3,190,983	+				+0.1
3,190,983	+				+0.0
3,190,984	-				-1.4
3,190,999	+				-0.5
3,191,000	-				-0.0
3,191,000	-				-0.3
3,191,153	-				-0.3
3,191,259	+		Ga0059261_3053	0.13	+0.2
3,191,259	+		Ga0059261_3053	0.13	-0.5
3,191,260	-		Ga0059261_3053	0.13	-0.9
3,191,441	+		Ga0059261_3053	0.21	+0.1
3,191,441	+		Ga0059261_3053	0.21	-0.8
3,191,441	+		Ga0059261_3053	0.21	+0.3
3,191,441	+		Ga0059261_3053	0.21	+1.2
3,191,441	+				-0.2
3,191,441	+		Ga0059261_3053	0.21	+0.3
3,191,441	+		Ga0059261_3053	0.21	-0.6
3,191,442	-		Ga0059261_3053	0.21	+1.1
3,191,442	-		Ga0059261_3053	0.21	+0.2
3,191,442	-		Ga0059261_3053	0.21	+1.3
3,191,442	-		Ga0059261_3053	0.21	-0.9
3,191,442	-		Ga0059261_3053	0.21	+0.2
3,191,442	-		Ga0059261_3053	0.21	+0.2
3,191,442	-		Ga0059261_3053	0.21	+0.4
3,191,442	-		Ga0059261_3053	0.21	-0.4
3,191,442	-		Ga0059261_3053	0.21	+1.1
3,191,494	+		Ga0059261_3053	0.23	-0.2
3,191,495	-		Ga0059261_3053	0.23	-0.2
3,191,495	-		Ga0059261_3053	0.23	-0.0
3,191,495	-		Ga0059261_3053	0.23	-0.0
3,191,495	-		Ga0059261_3053	0.23	-0.6
3,191,497	+		Ga0059261_3053	0.23	-0.7
3,191,497	+		Ga0059261_3053	0.23	-1.2
3,191,497	+		Ga0059261_3053	0.23	+1.4
3,191,498	-		Ga0059261_3053	0.23	+0.1
3,191,498	-		Ga0059261_3053	0.23	-1.0
3,191,498	-		Ga0059261_3053	0.23	-0.1
3,191,498	-		Ga0059261_3053	0.23	-0.3
3,191,498	-		Ga0059261_3053	0.23	-2.6
3,191,569	+		Ga0059261_3053	0.26	-1.4
3,191,569	+		Ga0059261_3053	0.26	-0.6
3,191,569	+		Ga0059261_3053	0.26	+0.1
3,191,570	-		Ga0059261_3053	0.26	-0.2
3,191,571	+		Ga0059261_3053	0.27	-0.9
3,191,571	+		Ga0059261_3053	0.27	-0.3
3,191,571	+		Ga0059261_3053	0.27	-1.4
3,191,571	+		Ga0059261_3053	0.27	+0.3
3,191,571	+		Ga0059261_3053	0.27	+0.1
3,191,571	+		Ga0059261_3053	0.27	+0.1
3,191,571	+		Ga0059261_3053	0.27	-0.4
3,191,572	-		Ga0059261_3053	0.27	+1.2
3,191,710	+		Ga0059261_3053	0.33	-0.3
3,191,710	+		Ga0059261_3053	0.33	+0.3
3,191,711	-		Ga0059261_3053	0.33	+0.4