Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_2670

Experiment: Nalidixic 0.05 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.05 mg/ml
2,779,154	+				-0.1
2,779,154	+				+0.6
2,779,155	-				-0.3
2,779,155	-				-0.5
2,779,235	+				-0.2
2,779,235	+				-1.6
2,779,391	+		Ga0059261_2669	0.24	-0.2
2,779,391	+		Ga0059261_2669	0.24	+0.4
2,779,391	+		Ga0059261_2669	0.24	-0.1
2,779,392	-		Ga0059261_2669	0.24	-1.5
2,779,392	-		Ga0059261_2669	0.24	+0.3
2,779,392	-		Ga0059261_2669	0.24	+0.2
2,779,411	+		Ga0059261_2669	0.26	+0.2
2,779,411	+		Ga0059261_2669	0.26	+0.8
2,779,411	+		Ga0059261_2669	0.26	+0.2
2,779,411	+		Ga0059261_2669	0.26	-0.4
2,779,412	-		Ga0059261_2669	0.26	-0.1
2,779,412	-		Ga0059261_2669	0.26	+0.1
2,779,733	+		Ga0059261_2669	0.59	-0.6
2,779,733	+		Ga0059261_2669	0.59	-0.2
2,779,733	+		Ga0059261_2669	0.59	-0.7
2,779,733	+		Ga0059261_2669	0.59	+0.5
2,779,733	+		Ga0059261_2669	0.59	+1.2
2,779,733	+		Ga0059261_2669	0.59	-0.3
2,779,733	+		Ga0059261_2669	0.59	-0.2
2,779,733	+		Ga0059261_2669	0.59	-0.8
2,779,733	+		Ga0059261_2669	0.59	+0.0
2,779,733	+		Ga0059261_2669	0.59	-0.4
2,779,733	+		Ga0059261_2669	0.59	-0.3
2,779,734	-		Ga0059261_2669	0.59	-0.3
2,779,734	-		Ga0059261_2669	0.59	-0.2
2,779,734	-		Ga0059261_2669	0.59	-0.1
2,779,734	-		Ga0059261_2669	0.59	+0.1
2,779,734	-		Ga0059261_2669	0.59	-0.4
2,779,734	-		Ga0059261_2669	0.59	+0.9
2,779,734	-		Ga0059261_2669	0.59	-0.3
2,779,734	-		Ga0059261_2669	0.59	+0.9
2,779,734	-		Ga0059261_2669	0.59	-0.0
2,779,952	+		Ga0059261_2669	0.82	+0.9
2,779,952	+		Ga0059261_2669	0.82	-0.2
2,779,952	+		Ga0059261_2669	0.82	-0.5
2,779,952	+		Ga0059261_2669	0.82	+0.1
2,779,952	+		Ga0059261_2669	0.82	+0.2
2,779,953	-		Ga0059261_2669	0.82	-0.7
2,779,953	-		Ga0059261_2669	0.82	-0.8
2,779,953	-		Ga0059261_2669	0.82	+0.9
2,779,953	-				-0.1
2,780,274	+		Ga0059261_2670	0.21	+0.2
2,780,274	+		Ga0059261_2670	0.21	+0.1
2,780,274	+		Ga0059261_2670	0.21	-0.1
2,780,275	-		Ga0059261_2670	0.21	+0.4
2,780,275	-		Ga0059261_2670	0.21	+0.2
2,780,275	-				+0.9
2,780,275	-		Ga0059261_2670	0.21	+0.6
2,780,628	+		Ga0059261_2670	0.65	+0.3
2,780,629	-		Ga0059261_2670	0.66	+0.1
2,780,805	+		Ga0059261_2670	0.88	-0.2
2,780,805	+		Ga0059261_2670	0.88	+0.5
2,780,805	+		Ga0059261_2670	0.88	-0.1
2,780,805	+		Ga0059261_2670	0.88	+0.4
2,780,805	+		Ga0059261_2670	0.88	+0.3
2,780,805	+		Ga0059261_2670	0.88	+0.3
2,780,805	+		Ga0059261_2670	0.88	+0.9
2,780,806	-		Ga0059261_2670	0.88	+0.2
2,780,806	-		Ga0059261_2670	0.88	+0.0
2,780,806	-		Ga0059261_2670	0.88	+0.2
2,780,806	-		Ga0059261_2670	0.88	+0.4
2,780,894	+				+0.2
2,780,894	+				-0.1
2,780,906	+				+0.1
2,780,906	+				-1.9
2,780,930	+				+0.6
2,780,940	+				+0.4
2,780,940	+				+0.2
2,780,940	+				-0.9
2,780,941	-				-0.3
2,780,941	-				-1.0
2,780,941	-				-0.1
2,780,941	-				-1.0
2,780,945	+				-0.6
2,780,946	-				+0.8
2,780,966	+				+0.1
2,780,967	-				+0.9
2,780,967	-				+0.9
2,780,967	-				+0.2
2,781,094	+				-0.2
2,781,095	-				-0.6
2,781,095	-				+0.7
2,781,202	+		Ga0059261_2671	0.14	+0.1
2,781,202	+		Ga0059261_2671	0.14	-0.0
2,781,202	+		Ga0059261_2671	0.14	-0.3
2,781,202	+		Ga0059261_2671	0.14	-0.4
2,781,203	-		Ga0059261_2671	0.14	-0.1
2,781,203	-		Ga0059261_2671	0.14	-1.5
2,781,203	-		Ga0059261_2671	0.14	+0.5
2,781,203	-		Ga0059261_2671	0.14	+0.2
2,781,203	-		Ga0059261_2671	0.14	-0.2
2,781,301	+		Ga0059261_2671	0.20	+0.2
2,781,301	+		Ga0059261_2671	0.20	-0.1
2,781,302	-		Ga0059261_2671	0.20	-0.1
2,781,302	-		Ga0059261_2671	0.20	-0.7
2,781,302	-		Ga0059261_2671	0.20	-0.6
2,781,302	-		Ga0059261_2671	0.20	+0.6
2,781,302	-		Ga0059261_2671	0.20	-0.6
2,781,302	-		Ga0059261_2671	0.20	+0.6
2,781,302	-		Ga0059261_2671	0.20	-0.3
2,781,343	+		Ga0059261_2671	0.23	+1.0
2,781,344	-		Ga0059261_2671	0.23	-0.7
2,781,359	+		Ga0059261_2671	0.24	+0.4
2,781,376	+		Ga0059261_2671	0.25	+1.4
2,781,376	+		Ga0059261_2671	0.25	+1.0
2,781,376	+		Ga0059261_2671	0.25	-0.8
2,781,377	-		Ga0059261_2671	0.25	+0.0
2,781,377	-		Ga0059261_2671	0.25	+0.2
2,781,377	-		Ga0059261_2671	0.25	+0.0
2,781,377	-		Ga0059261_2671	0.25	-0.9
2,781,377	-		Ga0059261_2671	0.25	+0.9
2,781,377	-				+0.9
2,781,377	-		Ga0059261_2671	0.25	-0.1
2,781,397	-		Ga0059261_2671	0.26	-0.6
2,781,550	+		Ga0059261_2671	0.36	+0.5
2,781,550	+		Ga0059261_2671	0.36	+0.6
2,781,550	+		Ga0059261_2671	0.36	-0.0
2,781,550	+		Ga0059261_2671	0.36	-0.6
2,781,550	+		Ga0059261_2671	0.36	+0.3
2,781,550	+		Ga0059261_2671	0.36	+0.7
2,781,550	+		Ga0059261_2671	0.36	-0.2
2,781,550	+		Ga0059261_2671	0.36	+0.1
2,781,551	-		Ga0059261_2671	0.36	+0.9
2,781,551	-		Ga0059261_2671	0.36	+0.6
2,781,551	-		Ga0059261_2671	0.36	+0.0
2,781,551	-		Ga0059261_2671	0.36	-0.1
2,781,551	-		Ga0059261_2671	0.36	+0.0
2,781,551	-		Ga0059261_2671	0.36	+0.2
2,781,551	-		Ga0059261_2671	0.36	+0.5
2,781,551	-		Ga0059261_2671	0.36	+0.1
2,781,551	-		Ga0059261_2671	0.36	-0.8
2,781,551	-		Ga0059261_2671	0.36	+0.3
2,781,551	-		Ga0059261_2671	0.36	+0.2
2,781,551	-		Ga0059261_2671	0.36	-0.3
2,781,646	+		Ga0059261_2671	0.41	+0.0
2,781,646	+		Ga0059261_2671	0.41	+0.7
2,781,646	+		Ga0059261_2671	0.41	+0.6
2,781,646	+		Ga0059261_2671	0.41	-0.5
2,781,646	+		Ga0059261_2671	0.41	+0.6
2,781,647	-		Ga0059261_2671	0.42	-0.6
2,781,647	-		Ga0059261_2671	0.42	-0.8
2,781,647	-		Ga0059261_2671	0.42	-0.6
2,781,647	-		Ga0059261_2671	0.42	+0.4
2,781,859	+		Ga0059261_2671	0.54	+0.9
2,781,860	-		Ga0059261_2671	0.55	-1.3
2,781,860	-		Ga0059261_2671	0.55	-0.4
2,781,889	+		Ga0059261_2671	0.56	+0.5
2,781,889	+		Ga0059261_2671	0.56	-0.2
2,781,890	-		Ga0059261_2671	0.56	+0.2
2,781,890	-		Ga0059261_2671	0.56	+0.6
2,781,890	-		Ga0059261_2671	0.56	-0.5
2,781,890	-		Ga0059261_2671	0.56	+0.2
2,781,890	-		Ga0059261_2671	0.56	-0.4